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4YE2
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BU of 4ye2 by Molmil
The 1.35 structure of a viral RNase L antagonist reveals basis for the 2'-5'-oligoadenylate binding and enzyme activity.
Descriptor: ADENOSINE-2'-5'-DIPHOSPHATE, Capping enzyme protein, SULFATE ION
Authors:Hu, L, Sankaran, B, Prasad, B.V.V.
Deposit date:2015-02-23
Release date:2015-04-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.098 Å)
Cite:Structural basis for 2'-5'-oligoadenylate binding and enzyme activity of a viral RNase L antagonist.
J.Virol., 89, 2015
4JW1
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BU of 4jw1 by Molmil
Crystal structure of N-terminal 618-residue fragment of LepB from Legionella pneumophila
Descriptor: CITRATE ANION, Effector protein B, GLYCEROL
Authors:Hu, L, Yao, Q, Zhu, Y, Shao, F.
Deposit date:2013-03-26
Release date:2013-05-08
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Structural analyses of Legionella LepB reveal a new GAP fold that catalytically mimics eukaryotic RasGAP
Cell Res., 23, 2013
5VTH
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BU of 5vth by Molmil
CTX-M-14 P167S:E166A mutant
Descriptor: Beta-lactamase
Authors:Hu, L, Patel, M, Sankaran, B, Prasad, B.V.V, Palzkill, T.
Deposit date:2017-05-17
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017
6AUK
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BU of 6auk by Molmil
Crystal structure of rotavirus Non Structural protein 2 (NSP2) mutant S313D
Descriptor: CHLORIDE ION, Non-structural protein 2, SULFATE ION
Authors:Hu, L, Prasad, B.V.
Deposit date:2017-09-01
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6RPG
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BU of 6rpg by Molmil
Structure of human Programmed cell death 1 ligand 1 (PD-L1) with inhibitor
Descriptor: Programmed cell death 1 ligand 1, ~{N}-[2-[[4-[[3-[3-[[4-[(2-acetamidoethylamino)methyl]-5-[(5-cyanopyridin-3-yl)methoxy]-2-methyl-phenoxy]methyl]-2-methyl-phenyl]-2-methyl-phenyl]methoxy]-2-[(5-cyanopyridin-3-yl)methoxy]-5-methyl-phenyl]methylamino]ethyl]ethanamide
Authors:Magiera-Mularz, K, Basu, S, Yang, J, Xu, B, Skalniak, L, Musielak, B, Kholodovych, V, Holak, T.A, Hu, L.
Deposit date:2019-05-14
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Design, Synthesis, Evaluation, and Structural Studies ofC2-Symmetric Small Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1 Protein-Protein Interaction.
J.Med.Chem., 62, 2019
6NIR
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BU of 6nir by Molmil
Crystal structure of a GII.4 norovirus HOV protease
Descriptor: HOV protease, HOV protease fragment
Authors:Prasad, B.V.V, Hu, L.
Deposit date:2018-12-31
Release date:2019-01-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.704 Å)
Cite:GII.4 Norovirus Protease Shows pH-Sensitive Proteolysis with a Unique Arg-His Pairing in the Catalytic Site.
J. Virol., 93, 2019
6XQR
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BU of 6xqr by Molmil
OXA-48 bound by Compound 2.2
Descriptor: Beta-lactamase, CHLORIDE ION, [1,1'-biphenyl]-4,4'-disulfonic acid
Authors:Taylor, D.M, Hu, L, Prasad, B.V.V, Palzkill, T.
Deposit date:2020-07-10
Release date:2021-12-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48.
Acs Infect Dis., 7, 2021
4R29
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BU of 4r29 by Molmil
Crystal structure of bacterial cysteine methyltransferase effector NleE
Descriptor: CITRIC ACID, GLYCEROL, S-ADENOSYLMETHIONINE, ...
Authors:Yao, Q, Chen, J, Hu, L, Zhang, L, Shao, F.
Deposit date:2014-08-11
Release date:2014-12-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure and Specificity of the Bacterial Cysteine Methyltransferase Effector NleE Suggests a Novel Substrate in Human DNA Repair Pathway.
Plos Pathog., 10, 2014
3NSQ
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BU of 3nsq by Molmil
Crystal structure of tetrameric RXRalpha-LBD complexed with antagonist danthron
Descriptor: 1,8-dihydroxyanthracene-9,10-dione, Retinoid X receptor, alpha
Authors:Zhang, H, Hu, T, Li, L, Zhou, R, Chen, L, Hu, L, Jiang, H, Shen, X.
Deposit date:2010-07-02
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Danthron functions as a retinoic X receptor antagonist by stabilizing tetramers of the receptor.
J.Biol.Chem., 286, 2011
3NSP
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BU of 3nsp by Molmil
Crystal structure of tetrameric RXRalpha-LBD
Descriptor: Retinoid X receptor, alpha
Authors:Zhang, H, Hu, T, Li, L, Zhou, R, Chen, L, Hu, L, Jiang, H, Shen, X.
Deposit date:2010-07-02
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Danthron functions as a retinoic X receptor antagonist by stabilizing tetramers of the receptor.
J.Biol.Chem., 286, 2011
4S2M
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BU of 4s2m by Molmil
Crystal Structure of OXA-163 complexed with iodide in the active site
Descriptor: Beta-lactamase, IODIDE ION
Authors:Stojanoski, V, Hu, L, Palzkill, T.G, Prasad, B.
Deposit date:2015-01-21
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Structural Basis for Different Substrate Profiles of Two Closely Related Class D beta-Lactamases and Their Inhibition by Halogens.
Biochemistry, 54, 2015
6VP0
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BU of 6vp0 by Molmil
Human Diacylglycerol Acyltransferase 1 in complex with oleoyl-CoA
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Diacylglycerol O-acyltransferase 1, Lauryl Maltose Neopentyl Glycol, ...
Authors:Wang, L, Qian, H, Han, Y, Nian, Y, Ren, Z, Zhang, H, Hu, L, Prasad, B.V.V, Yan, N, Zhou, M.
Deposit date:2020-02-01
Release date:2020-05-13
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure and mechanism of human diacylglycerol O-acyltransferase 1.
Nature, 581, 2020
7R6Z
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BU of 7r6z by Molmil
OXA-48 bound by Compound 3.3
Descriptor: 1,2-ETHANEDIOL, 4-amino-5-hydroxynaphthalene-2,7-disulfonic acid, Beta-lactamase, ...
Authors:Taylor, D.M, Hu, L, Prasad, B.V.V, Sankaran, B, Palzkill, T.
Deposit date:2021-06-24
Release date:2021-12-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unique Diacidic Fragments Inhibit the OXA-48 Carbapenemase and Enhance the Killing of Escherichia coli Producing OXA-48.
Acs Infect Dis., 7, 2021
6O01
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BU of 6o01 by Molmil
X-ray structure of H5N1-NS1 R38A K41A G71E mutant
Descriptor: Non-structural protein 1
Authors:Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
Deposit date:2019-02-14
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
6NRL
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BU of 6nrl by Molmil
X-ray structure of H6N6-NS1 delta(80-84) R38A K41A E71G mutant
Descriptor: Non-structural protein 1
Authors:Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
Deposit date:2019-01-23
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
6O3V
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BU of 6o3v by Molmil
Crystal structure for RVA-VP3
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-MONOPHOSPHATE, Protein VP3, ...
Authors:Kumar, D, Yu, X, Wang, Z, Hu, L, Prasad, V.
Deposit date:2019-02-27
Release date:2020-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:2.7 angstrom cryo-EM structure of rotavirus core protein VP3, a unique capping machine with a helicase activity.
Sci Adv, 6, 2020
6OQE
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BU of 6oqe by Molmil
X-ray structure of H6N6-NS1 delta(80-84) R38A K41A mutant
Descriptor: Non-structural protein 1
Authors:Mitra, S, Kumar, D, Hu, L, Prasad, B.V.V.
Deposit date:2019-04-26
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.899 Å)
Cite:Influenza A Virus Protein NS1 Exhibits Strain-Independent Conformational Plasticity.
J.Virol., 93, 2019
8TKA
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BU of 8tka by Molmil
Structure of Orthoreovirus RNA Chaperone SigmaNS R6A mutant
Descriptor: Protein sigma-NS
Authors:Prasad, B.V.V, Zhao, B, Hu, L.
Deposit date:2023-07-25
Release date:2024-03-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
8TL8
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BU of 8tl8 by Molmil
Structure of Orthoreovirus RNA Chaperone SigmaNS R6A mutant in complex with bile acid
Descriptor: GLYCOCHOLIC ACID, Protein sigma-NS
Authors:Prasad, B.V.V, Zhao, B, Hu, L, Neetu, N.
Deposit date:2023-07-26
Release date:2024-03-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
8TL1
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BU of 8tl1 by Molmil
Structure of Orthoreovirus RNA Chaperone SigmaNS N17
Descriptor: GLYCOCHOLIC ACID, Protein sigma-NS
Authors:Prasad, B.V.V, Zhao, B, Hu, L.
Deposit date:2023-07-26
Release date:2024-03-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Structure of orthoreovirus RNA chaperone sigma NS, a component of viral replication factories.
Nat Commun, 15, 2024
4RVA
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BU of 4rva by Molmil
A triple mutant in the omega-loop of TEM-1 beta-lactamase changes the substrate profile via a large conformational change and an altered general base for deacylation
Descriptor: BICARBONATE ION, Beta-lactamase TEM
Authors:Stojanoski, V, Chow, D.-C, Hu, L, Sankaran, B, Gilbert, H, Prasad, B.V.V, Palzkill, T.
Deposit date:2014-11-25
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4397 Å)
Cite:A Triple Mutant in the Omega-loop of TEM-1 beta-Lactamase Changes the Substrate Profile via a Large Conformational Change and an Altered General Base for Catalysis.
J.Biol.Chem., 290, 2015
4RX3
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BU of 4rx3 by Molmil
A triple mutant in the omega-loop of TEM-1 beta-lactamase changes the substrate profile via a large conformational change and an altered general base for catalysis
Descriptor: Beta-lactamase TEM, CITRATE ANION
Authors:Stojanoski, V, Chow, D, Hu, L, Sankaran, B, Gilbert, H, Prasad, B.V.V, Palzkill, T.
Deposit date:2014-12-08
Release date:2015-03-04
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:A Triple Mutant in the Omega-loop of TEM-1 beta-Lactamase Changes the Substrate Profile via a Large Conformational Change and an Altered General Base for Catalysis.
J.Biol.Chem., 290, 2015
4RX2
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BU of 4rx2 by Molmil
A triple mutant in the omega-loop of TEM-1 beta-lactamase changes the substrate profile via a large conformational change and an altered general base for catalysis
Descriptor: Beta-lactamase TEM, SULFATE ION
Authors:Stojanoski, V, Chow, D, Hu, L, Sankaran, B, Gilbert, H, Prasad, B.V.V, Palzkill, T.
Deposit date:2014-12-08
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.315 Å)
Cite:A Triple Mutant in the Omega-loop of TEM-1 beta-Lactamase Changes the Substrate Profile via a Large Conformational Change and an Altered General Base for Catalysis.
J.Biol.Chem., 290, 2015
3OZJ
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BU of 3ozj by Molmil
Crystal structure of human retinoic X receptor alpha complexed with bigelovin and coactivator SRC-1
Descriptor: (3aR,4S,4aR,7aR,8R,9aS)-4a,8-dimethyl-3-methylidene-2,5-dioxo-2,3,3a,4,4a,5,7a,8,9,9a-decahydroazuleno[6,5-b]furan-4-yl acetate, Retinoic acid receptor RXR-alpha, SRC-1, ...
Authors:Zhang, H, Li, L, Chen, L, Hu, L, Shen, X.
Deposit date:2010-09-25
Release date:2011-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure basis of bigelovin as a selective RXR agonist with a distinct binding mode
J.Mol.Biol., 407, 2011
6V6G
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BU of 6v6g by Molmil
Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase
Descriptor: Beta-lactamase, DI(HYDROXYETHYL)ETHER, SODIUM ION
Authors:Brown, C.A, Hu, L, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
Deposit date:2019-12-05
Release date:2020-04-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance.
J.Biol.Chem., 295, 2020

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