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PDB: 15 results

1IHM
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CRYSTAL STRUCTURE ANALYSIS OF NORWALK VIRUS CAPSID
Descriptor: capsid protein
Authors:Prasad, B.V, Hardy, M.E, Dokland, T, Bella, J, Rossmann, M.G, Estes, M.K.
Deposit date:2001-04-19
Release date:2001-05-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:X-ray crystallographic structure of the Norwalk virus capsid
Science, 286, 1999
7RSW
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Crystal structure of group B human rotavirus VP8*
Descriptor: Outer capsid protein VP4, peptide
Authors:Hu, L, Salmen, W, Sankaran, B, Prasad, B.V.
Deposit date:2021-08-11
Release date:2022-07-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Novel fold of rotavirus glycan-binding domain predicted by AlphaFold2 and determined by X-ray crystallography.
Commun Biol, 5, 2022
6AUK
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Crystal structure of rotavirus Non Structural protein 2 (NSP2) mutant S313D
Descriptor: CHLORIDE ION, Non-structural protein 2, SULFATE ION
Authors:Hu, L, Prasad, B.V.
Deposit date:2017-09-01
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1L9V
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Non Structural protein encoded by gene segment 8 of rotavirus (NSP2), an NTPase, ssRNA binding and nucleic acid helix-destabilizing protein
Descriptor: Rotavirus-NSP2
Authors:Jayaram, H, Taraporewala, Z, Patton, J.T, Prasad, B.V.
Deposit date:2002-03-26
Release date:2002-06-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rotavirus protein involved in genome replication and packaging exhibits a HIT-like fold.
Nature, 417, 2002
2GE8
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Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein
Descriptor: Nucleocapsid protein
Authors:Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
Deposit date:2006-03-18
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2FYR
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Crystal Structure of Norwalk Virus Protease grown in the presence of AEBSF
Descriptor: CHLORIDE ION, Chymotrypsin-like cysteine proteinase, MAGNESIUM ION
Authors:Zeitler, C.E, Estes, M.K, Venkataram Prasad, B.V.
Deposit date:2006-02-08
Release date:2006-07-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystallographic structure of the Norwalk virus protease at 1.5-A resolution.
J.Virol., 80, 2006
2FYQ
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Crystal Structure of the Norwalk Virus Protease
Descriptor: CHLORIDE ION, Chymotrypsin-like cysteine proteinase, PHOSPHATE ION
Authors:Zeitler, C.E, Estes, M.K, Venkataram Prasad, B.V.
Deposit date:2006-02-08
Release date:2006-07-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray crystallographic structure of the Norwalk virus protease at 1.5-A resolution.
J.Virol., 80, 2006
2GEC
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Structure of the N-terminal domain of avian infectious bronchitis virus nucleocapsid protein (strain Gray) in a novel dimeric arrangement
Descriptor: Nucleocapsid protein
Authors:Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
Deposit date:2006-03-19
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2GE7
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Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein
Descriptor: Nucleocapsid protein
Authors:Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
Deposit date:2006-03-18
Release date:2006-06-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006
2GX9
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X-ray structure of influenza virus NS1 effector domain
Descriptor: NS1 Effector Domain, THIOCYANATE ION
Authors:Bornholdt, Z.A, Prasad, B.V.
Deposit date:2006-05-08
Release date:2006-05-30
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of influenza virus NS1 effector domain.
Nat.Struct.Mol.Biol., 13, 2006
6PCU
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VP8* of a G2P[4] human rotavirus in complex with scFv antibody 9
Descriptor: GLYCEROL, Outer capsid protein VP4, SULFATE ION, ...
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2019-06-18
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human VP8* mAbs neutralize rotavirus selectively in human intestinal epithelial cells.
J.Clin.Invest., 130, 2019
5VX9
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VP8* of P[6] Human Rotavirus RV3 in complex with LNFP1
Descriptor: Outer capsid protein VP4, SULFATE ION, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX4
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VP8* of a G2P[4] Human Rotavirus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX8
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VP8* of P[6] Human Rotavirus RV3
Descriptor: Outer capsid protein VP4, SULFATE ION
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX5
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VP8* of a G2P[4] Human Rotavirus in complex with LNFP1
Descriptor: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.285 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018

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