Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4FL6
DownloadVisualize
BU of 4fl6 by Molmil
Crystal structure of the complex of the 3-MBT repeat domain of L3MBTL3 and UNC1215
Descriptor: Lethal(3)malignant brain tumor-like protein 3, UNKNOWN ATOM OR ION, [2-(phenylamino)benzene-1,4-diyl]bis{[4-(pyrrolidin-1-yl)piperidin-1-yl]methanone}
Authors:Zhong, N, Tempel, W, Ravichandran, M, Dong, A, Ingerman, L.A, Graslund, S, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2012-06-14
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Discovery of a chemical probe for the L3MBTL3 methyllysine reader domain.
Nat. Chem. Biol., 9, 2013
4HUQ
DownloadVisualize
BU of 4huq by Molmil
Crystal Structure of a transporter
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA 1, Energy-coupling factor transporter ATP-binding protein EcfA 2, Energy-coupling factor transporter transmembrane protein EcfT, ...
Authors:Zhang, P, Xu, K, Zhang, M, Zhao, Q, Yu, F.
Deposit date:2012-11-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.998 Å)
Cite:Crystal structure of a folate energy-coupling factor transporter from Lactobacillus brevis.
Nature, 497, 2013
3LAL
DownloadVisualize
BU of 3lal by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with N1-ethyl pyrimidinedione non-nucleoside inhibitor
Descriptor: 3-{[3-ethyl-5-(1-methylethyl)-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl]carbonyl}-5-methylbenzonitrile, HIV Reverse transcriptase, SULFATE ION
Authors:Lansdon, E.B, Mitchell, M.L.
Deposit date:2010-01-06
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:N1-Alkyl pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 20, 2010
3LAK
DownloadVisualize
BU of 3lak by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with N1-heterocycle pyrimidinedione non-nucleoside inhibitor
Descriptor: 3-({3-[(2-amino-6-fluoropyridin-4-yl)methyl]-5-(1-methylethyl)-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl}carbonyl)-5-methylbenzonitrile, CHLORIDE ION, HIV Reverse transcriptase, ...
Authors:Lansdon, E.B, Mitchell, M.L.
Deposit date:2010-01-06
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:N1-Heterocyclic pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 20, 2010
3LAM
DownloadVisualize
BU of 3lam by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with N1-propyl pyrimidinedione non-nucleoside inhibitor
Descriptor: 3-methyl-5-{[5-(1-methylethyl)-2,6-dioxo-3-propyl-1,2,3,6-tetrahydropyrimidin-4-yl]carbonyl}benzonitrile, HIV Reverse transcriptase, SULFATE ION
Authors:Lansdon, E.B, Mitchell, M.L.
Deposit date:2010-01-06
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:N1-Alkyl pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 20, 2010
3LAN
DownloadVisualize
BU of 3lan by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with N1-butyl pyrimidinedione non-nucleoside inhibitor
Descriptor: 3-{[3-butyl-5-(1-methylethyl)-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl]carbonyl}-5-methylbenzonitrile, HIV Reverse transcriptase, SULFATE ION
Authors:Lansdon, E.B, Mitchell, M.L.
Deposit date:2010-01-06
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:N1-Alkyl pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.
Bioorg.Med.Chem.Lett., 20, 2010
8GS9
DownloadVisualize
BU of 8gs9 by Molmil
SARS-CoV-2 BA.2 spike RBD in complex bound with VacBB-551
Descriptor: Heavy chain of VacBB-551, Light chain of VacBB-551, Spike glycoprotein
Authors:Liu, C.C, Ju, B, Shen, S.L, Zhang, Z.
Deposit date:2022-09-05
Release date:2023-05-03
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Omicron BQ.1.1 and XBB.1 unprecedentedly escape broadly neutralizing antibodies elicited by prototype vaccination.
Cell Rep, 42, 2023
7DST
DownloadVisualize
BU of 7dst by Molmil
FMDV capsid in complex with M170 Nab
Descriptor: M170 Nab, VP1 of O type FMDV capsid, VP2 of O type FMDV capsid, ...
Authors:Dong, H, Liu, P.
Deposit date:2021-01-02
Release date:2021-03-10
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural and molecular basis for foot-and-mouth disease virus neutralization by two potent protective antibodies.
Protein Cell, 13, 2022
7DSS
DownloadVisualize
BU of 7dss by Molmil
Complex of FMDV and M8 Nab
Descriptor: M8 Nab, VP1 of O type FMDV capsid, VP2 of O-type FMDV capsid, ...
Authors:Dong, H, Liu, P.
Deposit date:2021-01-02
Release date:2021-03-31
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural and molecular basis for foot-and-mouth disease virus neutralization by two potent protective antibodies.
Protein Cell, 13, 2022
7W28
DownloadVisualize
BU of 7w28 by Molmil
Crystal Structure of SETD3-SAH in complex with betaA-4PyrAla73 peptide
Descriptor: Actin, cytoplasmic 1, Histone-lysine N-methyltransferase setd3, ...
Authors:Li, H, Ma, H.
Deposit date:2021-11-22
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Histidine methyltransferase SETD3 methylates structurally diverse histidine mimics in actin.
Protein Sci., 31, 2022
7W29
DownloadVisualize
BU of 7w29 by Molmil
Crystal Structure of SETD3-SAH in complex with betaA-Orn73 peptide
Descriptor: Actin, cytoplasmic 1, N-terminally processed, ...
Authors:Li, H, Ma, H.
Deposit date:2021-11-23
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Histidine methyltransferase SETD3 methylates structurally diverse histidine mimics in actin.
Protein Sci., 31, 2022
7TYG
DownloadVisualize
BU of 7tyg by Molmil
Structure of the human leucine rich repeat protein SHOC2, residues 80-582
Descriptor: Leucine-rich repeat protein SHOC-2, MAGNESIUM ION
Authors:Dhembi, A, Clark, K, King, D.A.
Deposit date:2022-02-13
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the MRAS-SHOC2-PP1C phosphatase complex.
Nature, 609, 2022
7TXH
DownloadVisualize
BU of 7txh by Molmil
Human MRas Q71R in complex with human Shoc2 LRR domain M173I and human PP1Ca
Descriptor: GLYCEROL, Leucine-rich repeat protein SHOC-2, MAGNESIUM ION, ...
Authors:Hauseman, Z.J, Viscomi, J, Dhembi, A, Clark, K, King, D.A, Fodor, M.
Deposit date:2022-02-09
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the MRAS-SHOC2-PP1C phosphatase complex.
Nature, 609, 2022
7ENO
DownloadVisualize
BU of 7eno by Molmil
Mutant strain M3 of foot-and-mouth disease virus type O
Descriptor: VP1 of O type FMDV capsid, VP2 of O type FMDV capsid, VP3 of O type FMDV capsid, ...
Authors:Dong, H, Lu, Y.
Deposit date:2021-04-18
Release date:2021-06-02
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:A Heat-Induced Mutation on VP1 of Foot-and-Mouth Disease Virus Serotype O Enhanced Capsid Stability and Immunogenicity.
J.Virol., 95, 2021
7ENP
DownloadVisualize
BU of 7enp by Molmil
wild type of O type Foot-and-mouth disease virus
Descriptor: VP1 of O type FMDV capsid protein, VP2 of O type FMDV capsid protein, VP3 of O type FMDV capsid protein, ...
Authors:Dong, H, Lu, Y.
Deposit date:2021-04-18
Release date:2021-06-02
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A Heat-Induced Mutation on VP1 of Foot-and-Mouth Disease Virus Serotype O Enhanced Capsid Stability and Immunogenicity.
J.Virol., 95, 2021
7D7L
DownloadVisualize
BU of 7d7l by Molmil
The crystal structure of SARS-CoV-2 papain-like protease in complex with YM155
Descriptor: 1-(2-methoxyethyl)-2-methyl-3-(pyrazin-2-ylmethyl)benzo[f]benzimidazol-3-ium-4,9-dione, CAFFEINE, GLYCEROL, ...
Authors:Zhao, Y, Sun, L, Yang, H.T, Rao, Z.H.
Deposit date:2020-10-04
Release date:2021-04-21
Last modified:2021-11-17
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:High-throughput screening identifies established drugs as SARS-CoV-2 PLpro inhibitors.
Protein Cell, 12, 2021
7D7K
DownloadVisualize
BU of 7d7k by Molmil
The crystal structure of SARS-CoV-2 papain-like protease in apo form
Descriptor: 1,2-ETHANEDIOL, CAFFEINE, Non-structural protein 3, ...
Authors:Zhao, Y, Sun, L, Yang, H.T, Rao, Z.H.
Deposit date:2020-10-04
Release date:2021-04-21
Last modified:2021-11-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-throughput screening identifies established drugs as SARS-CoV-2 PLpro inhibitors.
Protein Cell, 12, 2021
7WP2
DownloadVisualize
BU of 7wp2 by Molmil
Cryo-EM structure of SARS-CoV-2 C.1.2 S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, VacW-209 heavy chain, ...
Authors:Zheng, Q, Sun, H, Ju, B, Zhang, Z, Li, S, Xia, N.
Deposit date:2022-01-22
Release date:2022-07-20
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.
Cell Res., 32, 2022
7WP0
DownloadVisualize
BU of 7wp0 by Molmil
Cryo-EM structure of SARS-CoV-2 Delta S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IG c335_light_IGLV1-40_IGLJ3, Spike protein S1, ...
Authors:Zheng, Q, Sun, H, Ju, B, Zhang, Z, Li, S, Xia, N.
Deposit date:2022-01-22
Release date:2022-07-20
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.
Cell Res., 32, 2022
7WP5
DownloadVisualize
BU of 7wp5 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spikeprotein S1, VacW-209 heavy chain, ...
Authors:Zheng, Q, Sun, H, Ju, B, Zhang, Z, Li, S, Xia, N.
Deposit date:2022-01-22
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.
Cell Res., 32, 2022
7WON
DownloadVisualize
BU of 7won by Molmil
Cryo-EM structure of SARS-CoV-2 S2P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, VacW-209 heavy chain, ...
Authors:Zheng, Q, Sun, H, Ju, B, Zhang, Z, Li, S, Xia, N.
Deposit date:2022-01-22
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.
Cell Res., 32, 2022
7WP1
DownloadVisualize
BU of 7wp1 by Molmil
Cryo-EM structure of SARS-CoV-2 Mu S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, VacW-209 heavy chain, ...
Authors:Zheng, Q, Sun, H, Ju, B, Zhang, Z, Li, S, Xia, N.
Deposit date:2022-01-22
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.
Cell Res., 32, 2022
6KI1
DownloadVisualize
BU of 6ki1 by Molmil
The transmembrane domain of a cyanobacterium bicarbonate transporter BicA
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, BICARBONATE ION, Low affinity sulfate transporter, ...
Authors:Zhang, P, Wang, C.C.
Deposit date:2019-07-17
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.809 Å)
Cite:Structural mechanism of the active bicarbonate transporter from cyanobacteria.
Nat.Plants, 5, 2019
6KI2
DownloadVisualize
BU of 6ki2 by Molmil
The STAS domain of cyanobacteria bicarbonate transporter BicA
Descriptor: Low affinity sulfate transporter, SULFATE ION
Authors:Zhang, P, Wang, C.C.
Deposit date:2019-07-17
Release date:2019-11-20
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Structural mechanism of the active bicarbonate transporter from cyanobacteria.
Nat.Plants, 5, 2019
7Y7K
DownloadVisualize
BU of 7y7k by Molmil
SARS-CoV-2 RBD in complex with 1F Fab
Descriptor: 1F VH, 1F VL, Spike protein S1
Authors:Zhao, S, Liu, F, Yang, X, Zhong, G.
Deposit date:2022-06-22
Release date:2023-02-22
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:A core epitope targeting antibody of SARS-CoV-2.
Protein Cell, 14, 2023

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon