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7C31
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BU of 7c31 by Molmil
Crystal structure of the grapevine defensin VvK1
分子名称: Knot1 domain-containing protein
著者Chen, M.W, Chang, S.C, Chandy, K.G, Luo, D.
登録日2020-05-10
公開日2020-09-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Modulation of Lymphocyte Potassium Channel KV1.3 by Membrane-Penetrating, Joint-Targeting Immunomodulatory Plant Defensin.
Acs Pharmacol Transl Sci, 3, 2020
3C92
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BU of 3c92 by Molmil
Thermoplasma acidophilum 20S proteasome with a closed gate
分子名称: Proteasome subunit alpha, Proteasome subunit beta
著者Rabl, J, Smith, D.M, Yu, Y, Chang, S.C, Goldberg, A.L, Cheng, Y.
登録日2008-02-14
公開日2008-08-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Mechanism of gate opening in the 20S proteasome by the proteasomal ATPases.
Mol.Cell, 30, 2008
3C91
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Thermoplasma acidophilum 20S proteasome with an open gate
分子名称: Proteasome subunit alpha, Proteasome subunit beta
著者Rabl, J, Smith, D.M, Yu, Y, Chang, S.C, Goldberg, A.L, Cheng, Y.
登録日2008-02-14
公開日2008-08-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Mechanism of gate opening in the 20S proteasome by the proteasomal ATPases.
Mol.Cell, 30, 2008
2MD0
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BU of 2md0 by Molmil
Solution structure of ShK-like immunomodulatory peptide from Ancylostoma caninum (hookworm)
分子名称: AcK1
著者Chhabra, S, Swarbrick, J.D, Mohanty, B, Chang, S.C, Chandy, G.K, Pennington, M.W, Norton, R.S.
登録日2013-08-28
公開日2014-07-02
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Kv1.3 channel-blocking immunomodulatory peptides from parasitic worms: implications for autoimmune diseases.
Faseb J., 28, 2014
2MCR
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Solution structure of ShK-like immunomodulatory peptide from Brugia malayi (filarial worm)
分子名称: Probable zinc metalloproteinase, putative
著者Chhabra, S, Swarbrick, J.D, Pennington, M.W, Chang, S.C, Norton, R.S.
登録日2013-08-22
公開日2014-07-02
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Kv1.3 channel-blocking immunomodulatory peptides from parasitic worms: implications for autoimmune diseases.
Faseb J., 28, 2014
7DS0
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BU of 7ds0 by Molmil
Crystal structure of Aspergillus oryzae Rib2 deaminase (C-terminal deletion mutant) at pH 6.5
分子名称: CMP/dCMP-type deaminase domain-containing protein, SULFATE ION, ZINC ION
著者Chen, S.C, Liaw, S.H, Hsu, C.H.
登録日2020-12-30
公開日2021-07-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Crystal structures of Aspergillus oryzae Rib2 deaminase: the functional mechanism involved in riboflavin biosynthesis.
Iucrj, 8, 2021
7DS1
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Crystal structure of Aspergillus oryzae Rib2 deaminase in complex with DARIPP (C-terminal deletion mutant at pH 6.5)
分子名称: CMP/dCMP-type deaminase domain-containing protein, ZINC ION, [(2~{R},3~{S},4~{S})-5-[[2,5-bis(azanyl)-6-oxidanylidene-1~{H}-pyrimidin-4-yl]amino]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate
著者Chen, S.C, Liaw, S.H, Hsu, C.H.
登録日2020-12-30
公開日2021-07-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal structures of Aspergillus oryzae Rib2 deaminase: the functional mechanism involved in riboflavin biosynthesis.
Iucrj, 8, 2021
7DRZ
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BU of 7drz by Molmil
Crystal structure of Aspergillus oryzae Rib2 deaminase (C-terminal deletion mutant) at pH 4.6
分子名称: CMP/dCMP-type deaminase domain-containing protein, ZINC ION
著者Chen, S.C, Liaw, S.H, Hsu, C.H.
登録日2020-12-30
公開日2021-07-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of Aspergillus oryzae Rib2 deaminase: the functional mechanism involved in riboflavin biosynthesis.
Iucrj, 8, 2021
7DRY
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BU of 7dry by Molmil
Crystal structure of Aspergillus oryzae Rib2 deaminase
分子名称: CMP/dCMP-type deaminase domain-containing protein, SULFATE ION, ZINC ION
著者Chen, S.C, Liaw, S.H, Hsu, C.H.
登録日2020-12-30
公開日2021-07-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Crystal structures of Aspergillus oryzae Rib2 deaminase: the functional mechanism involved in riboflavin biosynthesis.
Iucrj, 8, 2021
5BOL
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BU of 5bol by Molmil
DNA polymerase beta ternary complex with a templating 5ClC and incoming dGTP analog
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine, DNA (5'-D(*CP*CP*GP*AP*CP*(CDO)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
著者Freudenthal, B.D, Wilson, S.H.
登録日2015-05-27
公開日2015-08-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.
Proc.Natl.Acad.Sci.USA, 112, 2015
5BPC
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BU of 5bpc by Molmil
DNA polymerase beta ternary complex with a templating 5ClC and incoming dATP analog
分子名称: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosine, DNA (5'-D(*CP*CP*GP*AP*CP*(CDO)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
著者Freudenthal, B.D, Wilson, S.H.
登録日2015-05-28
公開日2015-08-19
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.
Proc.Natl.Acad.Sci.USA, 112, 2015
5BOM
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BU of 5bom by Molmil
DNA polymerase beta binary complex with a templating 5ClC
分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*(4U3)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
著者Freudenthal, B.D, Wilson, S.H.
登録日2015-05-27
公開日2015-08-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.0002 Å)
主引用文献Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.
Proc.Natl.Acad.Sci.USA, 112, 2015
7C33
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BU of 7c33 by Molmil
Macro domain of SARS-CoV-2 in complex with ADP-ribose
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein 3
著者Lin, M.H, Hsu, C.H.
登録日2020-05-11
公開日2020-11-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.83 Å)
主引用文献Structural, Biophysical, and Biochemical Elucidation of the SARS-CoV-2 Nonstructural Protein 3 Macro Domain.
Acs Infect Dis., 6, 2020
7C2P
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BU of 7c2p by Molmil
Structure of Egk Peptide
分子名称: Plant defensing Egk
著者El Sahili, A.
登録日2020-05-08
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Modulation of Lymphocyte Potassium Channel KV1.3 by Membrane-Penetrating, Joint-Targeting Immunomodulatory Plant Defensin.
Acs Pharmacol Transl Sci, 3, 2020
7CZ4
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BU of 7cz4 by Molmil
Structure of SARS-CoV-2 macro domain in complex with ADP-ribose
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein 3
著者Lin, M.H, Hsu, C.H.
登録日2020-09-07
公開日2020-11-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural, Biophysical, and Biochemical Elucidation of the SARS-CoV-2 Nonstructural Protein 3 Macro Domain.
Acs Infect Dis., 6, 2020
3MDJ
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BU of 3mdj by Molmil
ER Aminopeptidase, ERAP1, Bound to the Zinc Aminopeptidase Inhibitor, Bestatin
分子名称: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nguyen, T.T, Stern, L.J.
登録日2010-03-30
公開日2011-03-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural basis for antigenic peptide precursor processing by the endoplasmic reticulum aminopeptidase ERAP1.
Nat.Struct.Mol.Biol., 18, 2011
2ZU3
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BU of 2zu3 by Molmil
Complex structure of CVB3 3C protease with TG-0204998
分子名称: 3C proteinase, N-[(benzyloxy)carbonyl]-3-[(2,2-dimethylpropanoyl)amino]-L-alanyl-N-[(1R)-4-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}pentyl]-L-leucinamide
著者Lee, C.C, Tsui, Y.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZTZ
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crystal structure of 3C protease from CVB3 in space group P21
分子名称: 3C proteinase
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-11
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU2
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complex structure of CoV 229E 3CL protease with EPDTC
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3C-like proteinase, zinc(II)hydrogensulfide
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZTY
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BU of 2zty by Molmil
crystal structure of 3C protease from CVB3 in space group C2
分子名称: 3C proteinase
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-10
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU4
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BU of 2zu4 by Molmil
Complex structure of SARS-CoV 3CL protease with TG-0204998
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-3-[(2,2-dimethylpropanoyl)amino]-L-alanyl-N-[(1R)-4-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}pentyl]-L-leucinamide
著者Hsu, M.F, Lee, C.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZTX
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Complex structure of CVB3 3C protease with EPDTC
分子名称: 3C proteinase, zinc(II)hydrogensulfide
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-10
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU5
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BU of 2zu5 by Molmil
complex structure of SARS-CoV 3CL protease with TG-0205486
分子名称: 3C-like proteinase, N-[(benzyloxy)carbonyl]-O-tert-butyl-L-threonyl-N-[(1R)-4-cyclopropyl-4-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}butyl]-L-leucinamide
著者Hsu, M.F, Lee, C.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU1
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crystal structure of CVB3 3C protease mutant C147A
分子名称: 3C proteinase
著者Lee, C.C, Tsui, Y.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2M8S
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BU of 2m8s by Molmil
NMR Structure of the Cytoplasmic Tail of the Membrane Form of Heparin-binding EGF-like Growth Factor (proHB-EGF-CT) Complexed with the Ubiquitin Homology Domain of Bcl-2-associated Athanogene 1 from Mus musculus (mBAG-1-UBH)
分子名称: BAG family molecular chaperone regulator 1, Proheparin-binding EGF-like growth factor
著者Huang, H.W, Yu, C.
登録日2013-06-03
公開日2014-04-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Nuclear Magnetic Resonance Structure of the Cytoplasmic Tail of Heparin Binding EGF-like Growth Factor (proHB-EGF-CT) Complexed with the Ubiquitin Homology Domain of Bcl-2-Associated Athanogene 1 from Mus musculus (mBAG-1-UBH).
Biochemistry, 53, 2014

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