Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7E5X
DownloadVisualize
BU of 7e5x by Molmil
THE CRYSTAL STRUCTURE OF COVID-19 MAIN PROTEASE apo form at 2.2 angstrom
分子名称: 3C-like proteinase
著者Liu, X, Zhao, Y, Yang, H, Rao, Z.
登録日2021-02-21
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
2JXB
DownloadVisualize
BU of 2jxb by Molmil
Structure of CD3epsilon-Nck2 first SH3 domain complex
分子名称: T-cell surface glycoprotein CD3 epsilon chain, Cytoplasmic protein NCK2
著者Takeuchi, K, Yang, H, Ng, E, Park, S, Sun, Z.J, Reinherz, E.L, Wagner, G.
登録日2007-11-09
公開日2008-09-23
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structural and functional evidence that Nck interaction with CD3epsilon regulates T-cell receptor activity.
J.Mol.Biol., 380, 2008
7VUX
DownloadVisualize
BU of 7vux by Molmil
Complex structure of PD1 and 609A-Fab
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Huang, H, Zhu, Z, Zhao, J, Jiang, L, Yang, H, Deng, L, Meng, X, Ding, J, Yang, S, Zhao, L, Xu, W, Wang, X.
登録日2021-11-04
公開日2021-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献A strategy for the efficient construction of anti-PD1-based bispecific antibodies with desired IgG-like properties.
Mabs, 14, 2022
7E3L
DownloadVisualize
BU of 7e3l by Molmil
Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 58G6 heavy chain, 58G6 light chain, ...
著者Guo, H, Li, T, Liu, F, Gao, Y, Ji, X, Yang, H.
登録日2021-02-09
公開日2021-09-15
最終更新日2022-03-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Potent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants.
Nat Commun, 12, 2021
7E3K
DownloadVisualize
BU of 7e3k by Molmil
Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants
分子名称: 13G9 heavy chain, 13G9 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, H, Li, T, Liu, F, Gao, Y, Ji, X, Yang, H.
登録日2021-02-09
公開日2021-09-15
最終更新日2022-03-02
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Potent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants.
Nat Commun, 12, 2021
6LND
DownloadVisualize
BU of 6lnd by Molmil
Crystal structure of transposition protein TniQ
分子名称: ZINC ION, transposition protein TniQ
著者Wang, B, Xu, W, Yang, H.
登録日2019-12-28
公開日2020-02-19
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural basis of a Tn7-like transposase recruitment and DNA loading to CRISPR-Cas surveillance complex.
Cell Res., 30, 2020
6LNB
DownloadVisualize
BU of 6lnb by Molmil
CryoEM structure of Cascade-TniQ-dsDNA complex
分子名称: CRISPR RNA (60-MER), CRISPR-associated protein Cas6, CRISPR-associated protein Cas7, ...
著者Wang, B, Xu, W, Yang, H.
登録日2019-12-28
公開日2020-02-19
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structural basis of a Tn7-like transposase recruitment and DNA loading to CRISPR-Cas surveillance complex.
Cell Res., 30, 2020
6LNC
DownloadVisualize
BU of 6lnc by Molmil
CryoEM structure of Cascade-TniQ complex
分子名称: CRISPR RNA (60-MER), CRISPR-associated protein Cas6, CRISPR-associated protein Cas7, ...
著者Wang, B, Xu, W, Yang, H.
登録日2019-12-28
公開日2020-02-19
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structural basis of a Tn7-like transposase recruitment and DNA loading to CRISPR-Cas surveillance complex.
Cell Res., 30, 2020
6NR3
DownloadVisualize
BU of 6nr3 by Molmil
Cryo-EM structure of the TRPM8 ion channel in complex with high occupancy icilin, PI(4,5)P2, and calcium
分子名称: (2S)-1-{[(R)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl icosa-5,8,11,14-tetraenoate, CALCIUM ION, Icilin, ...
著者Yin, Y, Le, S.C, Hsu, A.L, Borgnia, M.J, Yang, H, Lee, S.-Y.
登録日2019-01-22
公開日2019-02-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.
Science, 363, 2019
6NR4
DownloadVisualize
BU of 6nr4 by Molmil
Cryo-EM structure of the TRPM8 ion channel with low occupancy icilin, PI(4,5)P2, and calcium
分子名称: Transient receptor potential cation channel subfamily M member 8
著者Yin, Y, Le, S.C, Hsu, A.L, Borgnia, M.J, Yang, H, Lee, S.-Y.
登録日2019-01-22
公開日2019-02-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.
Science, 363, 2019
6NR2
DownloadVisualize
BU of 6nr2 by Molmil
Cryo-EM structure of the TRPM8 ion channel in complex with the menthol analog WS-12 and PI(4,5)P2
分子名称: (1R,2S,5R)-N-(4-methoxyphenyl)-5-methyl-2-(propan-2-yl)cyclohexane-1-carboxamide, (2S)-1-{[(R)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl icosa-5,8,11,14-tetraenoate, Transient receptor potential cation channel subfamily M member 8
著者Yin, Y, Le, S.C, Hsu, A.L, Borgnia, M.J, Yang, H, Lee, S.-Y.
登録日2019-01-22
公開日2019-02-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.
Science, 363, 2019
5XQ1
DownloadVisualize
BU of 5xq1 by Molmil
Structural basis of kindlin-mediated integrin recognition and activation
分子名称: Fermitin family homolog 2,Integrin beta-3
著者Li, H, Yang, H, Sun, K, Zhang, Z, Yu, C, Wei, Z.
登録日2017-06-05
公開日2017-07-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.954 Å)
主引用文献Structural basis of kindlin-mediated integrin recognition and activation
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XPY
DownloadVisualize
BU of 5xpy by Molmil
Structural basis of kindlin-mediated integrin recognition and activation
分子名称: ACETATE ION, Fermitin family homolog 2, GLYCEROL
著者Li, H, Yang, H, Sun, K, Zhang, Z, Yu, C, Wei, Z.
登録日2017-06-05
公開日2017-07-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Structural basis of kindlin-mediated integrin recognition and activation
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XPZ
DownloadVisualize
BU of 5xpz by Molmil
Structural basis of kindlin-mediated integrin recognition and activation
分子名称: Fermitin family homolog 2, GLYCEROL
著者Li, H, Yang, H, Sun, K, Zhang, Z, Yu, C, Wei, Z.
登録日2017-06-05
公開日2017-07-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Structural basis of kindlin-mediated integrin recognition and activation
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XQ0
DownloadVisualize
BU of 5xq0 by Molmil
Structural basis of kindlin-mediated integrin recognition and activation
分子名称: Fermitin family homolog 2,Integrin beta-1, GLYCEROL
著者Li, H, Yang, H, Sun, K, Zhang, Z, Yu, C, Wei, Z.
登録日2017-06-05
公開日2017-07-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis of kindlin-mediated integrin recognition and activation
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5ZHZ
DownloadVisualize
BU of 5zhz by Molmil
Crystal structure of the apurinic/apyrimidinic endonuclease IV from Mycobacterium tuberculosis
分子名称: Probable endonuclease 4, SULFATE ION, ZINC ION
著者Zhang, W, Xu, Y, Yan, M, Li, S, Wang, H, Yang, H, Zhou, W, Rao, Z.
登録日2018-03-13
公開日2018-04-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystal structure of the apurinic/apyrimidinic endonuclease IV from Mycobacterium tuberculosis.
Biochem. Biophys. Res. Commun., 498, 2018
7VAH
DownloadVisualize
BU of 7vah by Molmil
The crystal structure of COVID-19 main protease in H41A mutation
分子名称: 3C-like proteinase
著者Liu, X, Zhao, Y, Yang, H, Rao, Z.
登録日2021-08-29
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.491 Å)
主引用文献Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WIX
DownloadVisualize
BU of 7wix by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Mycobactin import ATP-binding/permease protein IrtA, ...
著者Zhang, B, Sun, S, Yang, H, Rao, Z.
登録日2022-01-05
公開日2023-01-25
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023
7WIV
DownloadVisualize
BU of 7wiv by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB in complex with an AMP-PNP
分子名称: Mycobactin import ATP-binding/permease protein IrtA, Mycobactin import ATP-binding/permease protein IrtB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Zhang, B, Sun, S, Yang, H, Rao, Z.
登録日2022-01-05
公開日2023-01-25
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023
7WIU
DownloadVisualize
BU of 7wiu by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB in inward-facing state
分子名称: Mycobactin import ATP-binding/permease protein IrtA, Mycobactin import ATP-binding/permease protein IrtB
著者Zhang, B, Sun, S, Yang, H, Rao, Z.
登録日2022-01-05
公開日2023-01-25
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023
7WIW
DownloadVisualize
BU of 7wiw by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB complexed with ATP in an occluded conformation
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mycobactin import ATP-binding/permease protein IrtA, ...
著者Zhang, B, Sun, S, Yang, H, Rao, Z.
登録日2022-01-05
公開日2023-01-25
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023
7WWK
DownloadVisualize
BU of 7wwk by Molmil
Local refinement of the SARS-CoV-2 BA.1 Spike trimer in complex with 55A8 Fab
分子名称: 55A8 light chain, Spike glycoprotein
著者Guo, H, Gao, Y, Lu, Y, Yang, H, Ji, X.
登録日2022-02-13
公開日2023-02-15
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Local refinement of the SARS-CoV-2 BA.1 Spike trimer in complex with 55A8 Fab
To Be Published
7WWI
DownloadVisualize
BU of 7wwi by Molmil
SARS-CoV-2 BA.1 Spike trimer in complex with 55A8 Fab in the class 1 conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 55A8 heavy chain, ...
著者Guo, H, Gao, Y, Lu, Y, Yang, H, Ji, X.
登録日2022-02-13
公開日2023-02-15
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献SARS-CoV-2 BA.1 Spike trimer in complex with 55A8 Fab in the class 1 conformation
To Be Published
7WWJ
DownloadVisualize
BU of 7wwj by Molmil
SARS-CoV-2 BA.1 Spike trimer in complex with 55A8 Fab in the class 2 conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 55A8 heavy chain, ...
著者Guo, H, Gao, Y, Lu, Y, Yang, H, Ji, X.
登録日2022-02-13
公開日2023-02-15
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献EM structure of SARS-CoV-2 Omicron variant spike glycoprotein and 55A8
To Be Published
7XJ6
DownloadVisualize
BU of 7xj6 by Molmil
SARS-CoV-2 BA.1 Spike trimer in complex with 55A8 Fab and 58G6 Fab in the class 1 conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 55A8 heavy chain, ...
著者Guo, H, Gao, Y, Lu, Y, Yang, H, Ji, X.
登録日2022-04-15
公開日2023-04-19
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献SARS-CoV-2 BA.1 Spike trimer in complex with 55A8 Fab and 58G6 Fab in the class 1 conformation
To Be Published

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon