Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1N2V
DownloadVisualize
BU of 1n2v by Molmil
Crystal Structure of TGT in complex with 2-Butyl-5,6-dihydro-1H-imidazo[4,5-d]pyridazine-4,7-dione
Descriptor: 2-BUTYL-5,6-DIHYDRO-1H-IMIDAZO[4,5-D]PYRIDAZINE-4,7-DIONE, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Brenk, R, Naerum, L, Graedler, U, Gerber, H.-D, Garcia, G.A, Reuter, K, Stubbs, M.T, Klebe, G.
Deposit date:2002-10-24
Release date:2003-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Virtual screening for submicromolar leads of tRNA-guanine transglycosylase based on a new unexpected binding mode detected by crystal structure analysis
J.Med.Chem., 46, 2003
7P7J
DownloadVisualize
BU of 7p7j by Molmil
Complex I from E. coli, DDM/LMNG-purified, with DQ, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, CALCIUM ION, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
4Z0V
DownloadVisualize
BU of 4z0v by Molmil
The structure of human PDE12 residues 161-609
Descriptor: 2',5'-phosphodiesterase 12, GLYCEROL, MAGNESIUM ION
Authors:Nolte, R.T, Wisely, B, Wang, L, Wood, E.R.
Deposit date:2015-03-26
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The Role of Phosphodiesterase 12 (PDE12) as a Negative Regulator of the Innate Immune Response and the Discovery of Antiviral Inhibitors.
J.Biol.Chem., 290, 2015
7P7M
DownloadVisualize
BU of 7p7m by Molmil
Complex I from E. coli, DDM/LMNG-purified, inhibited by Piericidin A, Open state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
1N41
DownloadVisualize
BU of 1n41 by Molmil
Crystal Structure of Annexin V K27E Mutant
Descriptor: CALCIUM ION, SULFATE ION, annexin V
Authors:Mo, Y.D, Campos, B, Mealy, T.R, Commodore, L, Head, J.F, Dedman, J.R, Seaton, B.A.
Deposit date:2002-10-30
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Interfacial basic cluster in annexin V couples phospholipid binding and trimer formation on membrane surfaces
J.Biol.Chem., 278, 2003
7P7K
DownloadVisualize
BU of 7p7k by Molmil
Complex I from E. coli, DDM/LMNG-purified, with DQ, Resting state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, EICOSANE, ...
Authors:Kravchuk, V, Kampjut, D, Sazanov, L.
Deposit date:2021-07-19
Release date:2022-09-21
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A universal coupling mechanism of respiratory complex I.
Nature, 609, 2022
5K2D
DownloadVisualize
BU of 5k2d by Molmil
1.9A angstrom A2a adenosine receptor structure with MR phasing using XFEL data
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, ...
Authors:Batyuk, A, Galli, L, Ishchenko, A, Han, G.W, Gati, C, Popov, P, Lee, M.-Y, Stauch, B, White, T.A, Barty, A, Aquila, A, Hunter, M.S, Liang, M, Boutet, S, Pu, M, Liu, Z.-J, Nelson, G, James, D, Li, C, Zhao, Y, Spence, J.C.H, Liu, W, Fromme, P, Katritch, V, Weierstall, U, Stevens, R.C, Cherezov, V, GPCR Network (GPCR)
Deposit date:2016-05-18
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Native phasing of x-ray free-electron laser data for a G protein-coupled receptor.
Sci Adv, 2, 2016
1MVJ
DownloadVisualize
BU of 1mvj by Molmil
N-TYPE CALCIUM CHANNEL BLOCKER, OMEGA-CONOTOXIN MVIIA NMR, 15 STRUCTURES
Descriptor: SVIB
Authors:Nielsen, K.J, Thomas, L, Lewis, R.J, Alewood, P.F, Craik, D.J.
Deposit date:1996-08-02
Release date:1997-08-12
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:A consensus structure for omega-conotoxins with different selectivities for voltage-sensitive calcium channel subtypes: comparison of MVIIA, SVIB and SNX-202.
J.Mol.Biol., 263, 1996
1WPP
DownloadVisualize
BU of 1wpp by Molmil
Structure of Streptococcus gordonii inorganic pyrophosphatase
Descriptor: CHLORIDE ION, Probable manganese-dependent inorganic pyrophosphatase, SULFATE ION, ...
Authors:Fabrichniy, I.P, Lehtio, L, Salminen, A, Baykov, A.A, Lahti, R, Goldman, A.
Deposit date:2004-09-09
Release date:2004-11-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Studies of Metal Ions in Family II Pyrophosphatases: The Requirement for a Janus Ion
Biochemistry, 43, 2004
5X3N
DownloadVisualize
BU of 5x3n by Molmil
Crystal structure of DiUb-K6
Descriptor: PHOSPHATE ION, Polyubiquitin-B
Authors:Man, P, Shuai, G, Qian, Q, Lei, L.
Deposit date:2017-02-06
Release date:2017-04-12
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Structure of p-Ub-S65-NH2 at 1.82 Angstroms resolution.
To Be Published
5K5X
DownloadVisualize
BU of 5k5x by Molmil
Crystal structure of human PDGFRA
Descriptor: Platelet-derived growth factor receptor alpha, SULFATE ION
Authors:Yan, X.E, Liang, L, Yun, C.H.
Deposit date:2016-05-24
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.168 Å)
Cite:Structural and biochemical studies of the PDGFRA kinase domain
Biochem.Biophys.Res.Commun., 477, 2016
1MVF
DownloadVisualize
BU of 1mvf by Molmil
MazE addiction antidote
Descriptor: PemI-like protein 1, immunoglobulin heavy chain variable region
Authors:Loris, R, Marianovsky, I, Lah, J, Laeremans, T, Engelberg-Kulka, H, Glaser, G, Muyldermans, S, Wyns, L.
Deposit date:2002-09-25
Release date:2003-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the intrinsically flexible addiction antidote MazE.
J.Biol.Chem., 278, 2003
6HB1
DownloadVisualize
BU of 6hb1 by Molmil
Structure of Hgh1, crystal form I
Descriptor: CHLORIDE ION, Protein HGH1
Authors:Moenkemeyer, L, Klaips, C.L, Balchin, D, Koerner, R, Hartl, F.U, Bracher, A.
Deposit date:2018-08-09
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Chaperone Function of Hgh1 in the Biogenesis of Eukaryotic Elongation Factor 2.
Mol.Cell, 74, 2019
5X5W
DownloadVisualize
BU of 5x5w by Molmil
Crystal structure of pseudorabies virus glycoprotein D
Descriptor: GD, Nectin-1
Authors:Li, A, Lu, G, Qi, J, Wu, L, Tian, K, Luo, T, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2017-02-17
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of pseudorabies virus glycoprotein D
To Be Published
5K8X
DownloadVisualize
BU of 5k8x by Molmil
Crystal structure of mouse CARM1 in complex with inhibitor U3
Descriptor: 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, 1-METHOXY-2-(2-METHOXYETHOXY)ETHANE, ...
Authors:Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
Deposit date:2016-05-31
Release date:2017-06-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Crystal structure of mouse CARM1 in complex with inhibitor U3
To Be Published
4Z8B
DownloadVisualize
BU of 4z8b by Molmil
crystal structure of a DGL mutant - H51G H131N
Descriptor: 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside, CALCIUM ION, GLYCEROL, ...
Authors:Zamora-Caballero, S, Perez, A, Sanz, L, Bravo, J, Calvete, J.J.
Deposit date:2015-04-08
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Quaternary structure of Dioclea grandiflora lectin assessed by equilibrium sedimentation and crystallographic analysis of recombinant mutants.
Febs Lett., 589, 2015
7OZT
DownloadVisualize
BU of 7ozt by Molmil
Nanobodies restore stability to cancer-associated mutants of tumor suppressor protein p16INK4a
Descriptor: Camelid nanobody NB09, Cyclin-dependent kinase inhibitor 2A
Authors:Pastok, M.W, Burbidge, O, Itzhaki, L, Endicott, J.A, Noble, M.E.M.
Deposit date:2021-06-28
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Nanobodies restore stability to cancer-associated mutants of tumor suppressor protein p16INK4a
To Be Published
1MUE
DownloadVisualize
BU of 1mue by Molmil
Thrombin-Hirugen-L405,426
Descriptor: 2-(6-CHLORO-3-{[2,2-DIFLUORO-2-(1-OXIDO-2-PYRIDINYL)ETHYL]AMINO}-2-OXO-1(2H)-PYRAZINYL)-N-[(2-FLUOROPHENYL)METHYL]ACETAMIDE, HIRUDIN IIB, THROMBIN
Authors:Burgey, C.S, Robinson, K.A, Lyle, T.A, Nantermet, P.G, Selnick, H.G, Isaacs, R.C, Lewis, S.D, Lucas, B.J, Krueger, J.A, Singh, R, Miller-Stein, C, White, R.B, Wong, B, Lyle, E.A, Stranieri, M.T, Cook, J.J, McMasters, D.R, Pellicore, J.M, Pal, S, Wallace, A.A, Clayton, F.C, Bohn, D, Welsh, D.C, Lynch, J.J, Yan, Y, Chen, Z, Kuo, L, Gardell, S.J, Shafer, J.A, Vacca, J.P.
Deposit date:2002-09-23
Release date:2004-04-06
Last modified:2013-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Pharmacokinetic optimization of 3-amino-6-chloropyrazinone acetamide thrombin inhibitors. Implementation of P3 pyridine N-oxides to deliver an orally bioavailable series containing P1 N-benzylamides.
Bioorg.Med.Chem.Lett., 13, 2003
1WVJ
DownloadVisualize
BU of 1wvj by Molmil
Exploring the GluR2 ligand-binding core in complex with the bicyclic AMPA analogue (S)-4-AHCP
Descriptor: 3-(3-HYDROXY-7,8-DIHYDRO-6H-CYCLOHEPTA[D]ISOXAZOL-4-YL)-L-ALANINE, GLYCEROL, SULFATE ION, ...
Authors:Nielsen, B.B, Pickering, D.S, Greenwood, J.R, Brehm, L, Gajhede, M, Schousboe, A, Kastrup, J.S.
Deposit date:2004-12-15
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Exploring the GluR2 ligand-binding core in complex with the bicyclical AMPA analogue (S)-4-AHCP
FEBS J., 272, 2005
7P4A
DownloadVisualize
BU of 7p4a by Molmil
Non-canonical Staphylococcus aureus pathogenicity island repression.
Descriptor: Sri, Stl
Authors:Miguel-Romero, L, Alqasmi, M, Bacarizo, J, Tan, J.A, Cogdell, R.J, Chen, J, Byron, O, Christie, G.E, Marina, A, Penades, J.R.
Deposit date:2021-07-10
Release date:2022-07-27
Last modified:2022-11-16
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Non-canonical Staphylococcus aureus pathogenicity island repression.
Nucleic Acids Res., 50, 2022
6DNB
DownloadVisualize
BU of 6dnb by Molmil
Crystal structure of T110A:S256A mutant human Glutamate oxaloacetate transaminase 1 (GOT1)
Descriptor: Aspartate aminotransferase, cytoplasmic, GLYCEROL, ...
Authors:Assar, Z, Holt, M.C, Stein, A.J, Lairson, L, Lyssiotis, C.A.
Deposit date:2018-06-06
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical Characterization and Structure-Based Mutational Analysis Provide Insight into the Binding and Mechanism of Action of Novel Aspartate Aminotransferase Inhibitors.
Biochemistry, 57, 2018
5JUE
DownloadVisualize
BU of 5jue by Molmil
Crystal Structure of UIC2 Fab
Descriptor: GLYCEROL, heavy chain of UIC2 Fab, light chain of UIC2 Fab
Authors:Xia, D, Esser, L.
Deposit date:2016-05-10
Release date:2016-08-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the antigen-binding fragment of a monoclonal antibody specific for the multidrug-resistance-linked ABC transporter human P-glycoprotein.
Acta Crystallogr.,Sect.F, 72, 2016
4Z92
DownloadVisualize
BU of 4z92 by Molmil
crystal structure of parechovirus-1 virion
Descriptor: Capsid subunit VP3, RNA (5'-R(*AP*UP*UP*UP*UP*U)-3'), capsid subunit VP0, ...
Authors:Kalynych, S, Palkova, L, Plevka, P.
Deposit date:2015-04-09
Release date:2015-11-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The Structure of Human Parechovirus 1 Reveals an Association of the RNA Genome with the Capsid.
J.Virol., 90, 2015
5KCK
DownloadVisualize
BU of 5kck by Molmil
Crystal structure of anthranilate synthase component I from Streptococcus pneumoniae TIGR4
Descriptor: Anthranilate synthase component I, GLYCEROL
Authors:Chang, C, Michalska, K, Bigelow, L, Jedrzejczak, R, ANDERSON, W.F, JOACHIMIAK, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-06-06
Release date:2016-06-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of anthranilate synthase component I from Streptococcus pneumoniae TIGR4
To Be Published
2KZV
DownloadVisualize
BU of 2kzv by Molmil
Solution NMR structure of CV_0373(175-257) protein from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR118A
Descriptor: Uncharacterized protein
Authors:Yang, Y, Ramelot, T.A, Wang, D, Ciccosanti, C, Mao, L, Janjua, H, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-06-25
Release date:2010-08-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of CV_0373(175-257) protein from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR118A.
To be Published

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon