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1VJO
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BU of 1vjo by Molmil
Crystal structure of Alanine--glyoxylate aminotransferase (ALR1004) from Nostoc sp. at 1.70 A resolution
Descriptor: PYRIDOXAL-5'-PHOSPHATE, alanine--glyoxylate aminotransferase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-03-16
Release date:2004-03-23
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of an alanine-glyoxylate aminotransferase from Anabaena sp. at 1.70 A resolution reveals a noncovalently linked PLP cofactor
Proteins, 58, 2005
6ODM
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BU of 6odm by Molmil
Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent capsid/CATC, asymmetric unit
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Liu, Y.T, Jih, J, Dai, X.H, Bi, G.Q, Zhou, Z.H.
Deposit date:2019-03-26
Release date:2019-06-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome.
Nature, 570, 2019
4UT6
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BU of 4ut6 by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 B7
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 B7, ...
Authors:Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
4UT9
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BU of 4ut9 by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein dimer in complex with the ScFv fragment of the broadly neutralizing human antibody EDE1 C10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C10, ENVELOPE GLYCOPROTEIN E
Authors:Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
6OD7
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BU of 6od7 by Molmil
Herpes simplex virus type 1 (HSV-1) pUL6 portal protein, dodecameric complex
Descriptor: Portal protein
Authors:Liu, Y.T, Jih, J, Dai, X.H, Bi, G.Q, Zhou, Z.H.
Deposit date:2019-03-26
Release date:2019-06-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome.
Nature, 570, 2019
8D35
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BU of 8d35 by Molmil
Crystal structure of SARS-CoV-2 main protease (Mpro) C145A mutant in complex with peptide from human tRNA methyltransferase TRMT1
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION, GLYCEROL, ...
Authors:D'Oliviera, A, Mugridge, J.S.
Deposit date:2022-05-31
Release date:2023-03-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Recognition and Cleavage of Human tRNA Methyltransferase TRMT1 by the SARS-CoV-2 Main Protease.
Elife, 2023
1J6U
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BU of 1j6u by Molmil
Crystal structure of UDP-N-acetylmuramate-alanine ligase MurC (TM0231) from Thermotoga maritima at 2.3 A resolution
Descriptor: UDP-N-acetylmuramate-alanine ligase MurC
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2002-08-29
Release date:2002-11-06
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an Udp-n-acetylmuramate-alanine ligase MurC (TM0231) from Thermotoga maritima at 2.3 A resolution.
Proteins, 55, 2004
1J5S
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BU of 1j5s by Molmil
Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 A resolution
Descriptor: URONATE ISOMERASE
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2002-07-02
Release date:2002-07-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of uronate isomerase (TM0064) from Thermotoga maritima at 2.85 A resolution.
Proteins, 53, 2003
6W2E
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BU of 6w2e by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
Deposit date:2020-03-05
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
6W19
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BU of 6w19 by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
Deposit date:2020-03-03
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
6W2D
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BU of 6w2d by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
Descriptor: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
Authors:Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
Deposit date:2020-03-05
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
7CTH
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BU of 7cth by Molmil
Cryo-EM structure of dengue virus serotype 2 in complex with the scFv fragment of the broadly neutralizing antibody EDE1 C10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Core protein, Single Chain Variable Fragment
Authors:Zhang, X, Sharma, A, Duquerroy, S, Zhou, Z.H, Rey, F.A.
Deposit date:2020-08-19
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
1VJ2
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BU of 1vj2 by Molmil
Crystal structure of a novel family of manganese-containing cupin (tm1459) from thermotoga maritima at 1.65 A resolution
Descriptor: MANGANESE (II) ION, UNKNOWN LIGAND, novel manganese-containing cupin TM1459
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2003-12-03
Release date:2003-12-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a novel manganese-containing cupin (TM1459) from Thermotoga maritima at 1.65 A resolution.
Proteins, 56, 2004
6NHJ
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BU of 6nhj by Molmil
Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development
Descriptor: Major capsid protein, Minor capsid protein, Small capsomere-interacting protein, ...
Authors:Liu, W, Dai, X.H, Jih, J, Chan, K, Trang, P, Yu, X.K, Balogun, R, Mei, Y, Liu, F.Y, Zhou, Z.H.
Deposit date:2018-12-22
Release date:2019-03-06
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Atomic structures and deletion mutant reveal different capsid-binding patterns and functional significance of tegument protein pp150 in murine and human cytomegaloviruses with implications for therapeutic development.
PLoS Pathog., 15, 2019
7A3O
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BU of 7a3o by Molmil
Crystal structure of dengue 1 virus envelope glycoprotein in complex with the scFv fragment of the broadly neutralizing human antibody EDE1 C10
Descriptor: Core protein, GLYCEROL, SULFATE ION, ...
Authors:Sharma, A, Vaney, M.C, Guardado-Calvo, P, Duquerroy, S, Rouvinski, A, Rey, F.A.
Deposit date:2020-08-18
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
7A3R
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BU of 7a3r by Molmil
Crystal structure of dengue 1 virus envelope glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Core protein, alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Sharma, A, Vaney, M.C, Guardado-Calvo, P, Duquerroy, S, Rouvinski, A, Rey, F.A.
Deposit date:2020-08-18
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
7A3N
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BU of 7a3n by Molmil
Crystal structure of Zika virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C10
Descriptor: CALCIUM ION, Core protein, EDE1 C10 Fab
Authors:Sharma, A, Vaney, M.C, Guardado-Calvo, P, Duquerroy, S, Rouvinski, A, Rey, F.A.
Deposit date:2020-08-18
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
7A3T
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BU of 7a3t by Molmil
Crystal structure of dengue 3 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C8
Descriptor: Core protein, EDE1 C8 antibody Fab fragment, GLYCEROL, ...
Authors:Sharma, A, Vaney, M.C, Guardado-Calvo, P, Duquerroy, S, Rouvinski, A, Rey, F.A.
Deposit date:2020-08-18
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
7A3U
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BU of 7a3u by Molmil
Crystal structure of Zika virus envelope glycoprotein in complex with the divalent F(ab')2 fragment of the broadly neutralizing human antibody EDE1 C10
Descriptor: EDE1 C10 antibody divalent F(ab')2 fragment, EDE1 C10 divalent F(ab')2 fragment, Envelope protein
Authors:Sharma, A, Vaney, M.C, Guardado-Calvo, P, Duquerroy, S, Rouvinski, A, Rey, F.A.
Deposit date:2020-08-18
Release date:2021-12-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
7A3P
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BU of 7a3p by Molmil
Crystal structure of dengue 3 virus envelope glycoprotein in complex with the scFv fragment of the broadly neutralizing human antibody EDE1 C10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, Single Chain Variable Fragment
Authors:Sharma, A, Vaney, M.C, Guardado-Calvo, P, Duquerroy, S, Rouvinski, A, Rey, F.A.
Deposit date:2020-08-18
Release date:2021-12-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
7A3S
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BU of 7a3s by Molmil
Crystal structure of dengue 3 virus envelope glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Genome polyprotein, SULFATE ION
Authors:Sharma, A, Vaney, M.C, Guardado-Calvo, P, Duquerroy, S, Rouvinski, A, Navarro-Sanchez, E, Rey, F.A.
Deposit date:2020-08-18
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
7A3Q
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BU of 7a3q by Molmil
Crystal structure of dengue 4 virus envelope glycoprotein in complex with the scFv fragment of the broadly neutralizing human antibody EDE1 C10
Descriptor: (2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Sharma, A, Vaney, M.C, Guardado-Calvo, P, Duquerroy, S, Rouvinski, A, Rey, F.A.
Deposit date:2020-08-18
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The epitope arrangement on flavivirus particles contributes to Mab C10's extraordinary neutralization breadth across Zika and dengue viruses.
Cell, 184, 2021
1O58
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BU of 1o58 by Molmil
Crystal structure of O-acetylserine sulfhydrylase (TM0665) from Thermotoga maritima at 1.80 A resolution
Descriptor: O-acetylserine sulfhydrylase, PHOSPHATE ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2003-08-20
Release date:2003-09-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of O-acetylserine sulfhydrylase (TM0665) from Thermotoga maritima at 1.8 A resolution
Proteins, 56, 2004
1O5U
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BU of 1o5u by Molmil
Crystal structure of a duf861 family protein (tm1112) from thermotoga maritima at 1.83 A resolution
Descriptor: UNKNOWN LIGAND, novel Thermotoga maritima enzyme TM1112
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2003-10-06
Release date:2003-11-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of a novel Thermotoga maritima enzyme (TM1112) from the cupin family at 1.83 A resolution
Proteins, 56, 2004
1O1Z
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BU of 1o1z by Molmil
Crystal structure of glycerophosphodiester phosphodiesterase (GDPD) (TM1621) from Thermotoga maritima at 1.60 A resolution
Descriptor: SODIUM ION, glycerophosphodiester phosphodiesterase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2003-02-12
Release date:2003-04-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 A resolution.
Proteins, 56, 2004

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