6ODM

Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent capsid/CATC, asymmetric unit

Summary for 6ODM

EMDB information9860
DescriptorMajor capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ... (7 entities in total)
Functional Keywordstegument, portal, dna-packaging, capsid, viral protein
Biological sourceHuman herpesvirus 1 strain KOS (HHV-1)
Total number of polymer chains19
Total molecular weight1742228.26
Authors
Liu, Y.T.,Jih, J.,Dai, X.H.,Bi, G.Q.,Zhou, Z.H. (deposition date: 2019-03-26, release date: 2019-06-19, Last modification date: 2019-06-26)
Primary citation
Liu, Y.T.,Jih, J.,Dai, X.,Bi, G.Q.,Zhou, Z.H.
Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome.
Nature, 570:257-261, 2019
PubMed: 31142842 (PDB entries with the same primary citation)
DOI: 10.1038/s41586-019-1248-6
MImport into Mendeley
Experimental method
ELECTRON MICROSCOPY
?

Structure validation

ClashscoreRamachandran outliersSidechain outliers5 0.3% 0.1%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures