6ODM
Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent capsid/CATC, asymmetric unit
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (T, W, S, X) | Major capsid protein | polymer | 1374 | 149303.1 | 4 | UniProt (H9E925) Pfam (PF03122) | Human herpesvirus 1 strain KOS (HHV-1) | MCP |
| 2 | E, F, G, H (L, P, E, F) | Small capsomere-interacting protein | polymer | 112 | 12108.7 | 4 | UniProt (Q25BW6) Pfam (PF04496) | Human herpesvirus 1 strain KOS (HHV-1) | |
| 3 | I, Q (5, D) | Triplex capsid protein 1 | polymer | 465 | 50370.4 | 2 | UniProt (Q1T724) Pfam (PF03327) | Human herpesvirus 1 strain KOS (HHV-1) | |
| 4 | J, K, R, S (6, 7, H, A) | Triplex capsid protein 2 | polymer | 318 | 34301.6 | 4 | UniProt (G8H8D9) Pfam (PF01802) | Human herpesvirus 1 strain KOS (HHV-1) | |
| 5 | L (C) | Capsid vertex component 1 | polymer | 703 | 74769.4 | 1 | UniProt (F8REV0) Pfam (PF04559) | Human herpesvirus 1 strain KOS (HHV-1) | |
| 6 | M, N (G, K) | Capsid vertex component 2 | polymer | 580 | 62752.8 | 2 | UniProt (D3YPI2) Pfam (PF01499) | Human herpesvirus 1 strain KOS (HHV-1) | |
| 7 | O, P (O, B) | Large tegument protein deneddylase | polymer | 3094 | 329179.5 | 2 | UniProt (A0A0B5E3K2) Pfam (PF04843) Pfam (PF03586) UniProt (by SIFTS) (I1UYK0) | Human herpesvirus 1 strain KOS (HHV-1) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 19 |
| Total formula weight | 1742228.3 | |
| All* | Total formula weight | 1742228.3 |
