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7V1M
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BU of 7v1m by Molmil
Structural basis for the co-chaperone relationship of sNASP and ASF1b
Descriptor: Histone H3.3, Histone H4, Histone chaperone ASF1B, ...
Authors:Bao, H, Huang, H.
Deposit date:2021-08-04
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.834 Å)
Cite:NASP maintains histone H3-H4 homeostasis through two distinct H3 binding modes.
Nucleic Acids Res., 50, 2022
8Z0R
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BU of 8z0r by Molmil
Cryo-EM structure of tetramer HtmB2-CT
Descriptor: special condensation domain in NRPS
Authors:Sun, Y.H, Zhang, Z.Y, Mei, Q.
Deposit date:2024-04-10
Release date:2025-03-19
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Formation of the Diketopiperazine Moiety by a Distinct Condensation-Like Domain in Hangtaimycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 64, 2025
8Z0Q
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BU of 8z0q by Molmil
Cryo-EM structure of dimer HtmB2-CT
Descriptor: Special condensation domain in NRPS
Authors:Sun, Y.H, Zhang, Z.Y, Mei, Q.
Deposit date:2024-04-10
Release date:2025-03-19
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Formation of the Diketopiperazine Moiety by a Distinct Condensation-Like Domain in Hangtaimycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 64, 2025
8Z0S
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BU of 8z0s by Molmil
Cryo-EM structure of trimer HtmB2-CT
Descriptor: special condensation domain in NRPS
Authors:Sun, Y.H, Zhang, Z.Y, Mei, Q.
Deposit date:2024-04-10
Release date:2025-03-19
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Formation of the Diketopiperazine Moiety by a Distinct Condensation-Like Domain in Hangtaimycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 64, 2025
3M3W
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BU of 3m3w by Molmil
Crystal structure of mouse PACSIN3 BAR domain mutant
Descriptor: Protein kinase C and casein kinase II substrate protein 3
Authors:Meng, G, Bai, X.Y.
Deposit date:2010-03-10
Release date:2011-03-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rigidity of wedge loop in PACSIN 3 protein is a key factor in dictating diameters of tubules
J.Biol.Chem., 287, 2012
5V2N
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BU of 5v2n by Molmil
Crystal Structure of APO Human SETD8
Descriptor: 1,2-ETHANEDIOL, N-lysine methyltransferase KMT5A
Authors:Skene, R.J.
Deposit date:2017-03-05
Release date:2018-03-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The dynamic conformational landscape of the protein methyltransferase SETD8.
Elife, 8, 2019
4OR6
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BU of 4or6 by Molmil
Structure of Influenza B PB2 cap-binding domain with Q325F mutation complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Polymerase basic protein 2
Authors:Liu, Y, Fan, J, Zheng, X.
Deposit date:2014-02-11
Release date:2015-02-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:The crystal structure of the PB2 cap-binding domain of influenza B virus reveals a novel cap recognition mechanism.
J.Biol.Chem., 290, 2015
7XH8
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BU of 7xh8 by Molmil
The structure of ZCB11 Fab against SARS-CoV-2 Omicron Spike
Descriptor: Spike glycoprotein, The heavy chain of ZCB11 antibody, The light chain of ZCB11 antibody
Authors:Hang, L, Dang, S.
Deposit date:2022-04-07
Release date:2022-06-29
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:A broadly neutralizing antibody protects Syrian hamsters against SARS-CoV-2 Omicron challenge.
Nat Commun, 13, 2022
7BW6
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BU of 7bw6 by Molmil
Varicella-zoster virus capsid
Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
Authors:Wang, P.Y, Qi, J.X, Liu, C.C, Sun, J.Q.
Deposit date:2020-04-13
Release date:2020-09-23
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the varicella-zoster virus A-capsid.
Nat Commun, 11, 2020
7DHT
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BU of 7dht by Molmil
Solution structure of ATG8f of Arabidopsis thaliana
Descriptor: Autophagy-related protein 8f
Authors:Lee, K.M, Sun, S.L, Wong, K.B.
Deposit date:2020-11-17
Release date:2021-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanistic insights into an atypical interaction between ATG8 and SH3P2 in Arabidopsis thaliana.
Autophagy, 18, 2022
3QE6
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BU of 3qe6 by Molmil
Mouse PACSIN 3 F-BAR domain structure
Descriptor: MAGNESIUM ION, Protein kinase C and casein kinase II substrate protein 3
Authors:Meng, G, Bai, X, Zheng, X.
Deposit date:2011-01-19
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rigidity of wedge loop in PACSIN 3 protein is a key factor in dictating diameters of tubules
J.Biol.Chem., 287, 2012
2O3C
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BU of 2o3c by Molmil
Crystal structure of zebrafish Ape
Descriptor: APEX nuclease 1, LEAD (II) ION
Authors:Georgiadis, M.M, Gaur, R.K, Delaplane, S, Svenson, J.
Deposit date:2006-12-01
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of the redox function in mammalian apurinic/apyrimidinic endonuclease
Mutat.Res., 643, 2008
1VRH
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BU of 1vrh by Molmil
HRV14/SDZ 880-061 COMPLEX
Descriptor: 2-[4-(2H-1,4-BENZOTHIAZINE-3-YL)-PIPERAZINE-1-LY]-1,3-THIAZOLE-4-CARBOXYLIC ACID ETHYLESTER, RHINOVIRUS 14
Authors:Oren, D.A, Zhang, A, Arnold, E.
Deposit date:1996-02-26
Release date:1997-02-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Synthesis and activity of piperazine-containing antirhinoviral agents and crystal structure of SDZ 880-061 bound to human rhinovirus 14.
J.Mol.Biol., 259, 1996
8K4B
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BU of 8k4b by Molmil
Cryo-EM structure of nucleotide-bound ComA with ZinC ion
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Competence factor transporting ATP-binding protein/permease ComA, ZINC ION
Authors:Yu, L, Xin, X, Min, L, Feng, H.
Deposit date:2023-07-17
Release date:2023-10-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of peptide secretion for Quorum sensing by ComA.
Nat Commun, 14, 2023
8K7A
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BU of 8k7a by Molmil
Cryo-EM structure of nucleotide-bound ComA E647Q mutant with Mg2+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Transport/processing ATP-binding protein ComA
Authors:Yu, L, Xin, X, Min, L.
Deposit date:2023-07-26
Release date:2023-10-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis of peptide secretion for Quorum sensing by ComA.
Nat Commun, 14, 2023
3BXW
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BU of 3bxw by Molmil
Crystal Structure of Stabilin-1 Interacting Chitinase-Like Protein, SI-CLP
Descriptor: Chitinase domain-containing protein 1, SULFATE ION
Authors:Meng, G, Green, T.J.
Deposit date:2008-01-15
Release date:2009-01-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of human stabilin-1 interacting chitinase-like protein (SI-CLP) reveals a saccharide-binding cleft with lower sugar-binding selectivity.
J.Biol.Chem., 285, 2010
3CTF
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BU of 3ctf by Molmil
Crystal structure of oxidized GRX2
Descriptor: Glutaredoxin-2
Authors:Yu, J, Teng, Y.B, Zhou, C.Z.
Deposit date:2008-04-14
Release date:2008-11-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the different activities of yeast Grx1 and Grx2.
Biochim.Biophys.Acta, 1804, 2010
5UR2
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BU of 5ur2 by Molmil
Crystal structure of proline utilization A (PutA) from Bdellovibrio bacteriovorus inactivated by N-propargylglycine
Descriptor: Bifunctional protein PutA, N-propargylglycine-modified flavin adenine dinucleotide
Authors:Tanner, J.J.
Deposit date:2017-02-09
Release date:2017-08-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Biophysical investigation of type A PutAs reveals a conserved core oligomeric structure.
FEBS J., 284, 2017
4H12
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BU of 4h12 by Molmil
The crystal structure of methyltransferase domain of human SET domain-containing protein 2 in complex with S-adenosyl-L-homocysteine
Descriptor: CHLORIDE ION, Histone-lysine N-methyltransferase SETD2, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Amaya, M.F, Dong, A, Zeng, H, Mackenzie, F, Bunnage, M, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2012-09-10
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Sinefungin Derivatives as Inhibitors and Structure Probes of Protein Lysine Methyltransferase SETD2.
J.Am.Chem.Soc., 134, 2012
4HC4
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BU of 4hc4 by Molmil
Human HMT1 hnRNP methyltransferase-like protein 6 (S. cerevisiae)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Protein arginine N-methyltransferase 6, ...
Authors:Dong, A, Zeng, H, He, H, El Bakkouri, M, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2012-09-28
Release date:2012-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis of arginine asymmetrical dimethylation by PRMT6.
Biochem. J., 473, 2016
5T5G
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BU of 5t5g by Molmil
human SETD8 in complex with MS2177
Descriptor: 7-(2-aminoethoxy)-6-methoxy-2-(pyrrolidin-1-yl)-N-[5-(pyrrolidin-1-yl)pentyl]quinazolin-4-amine, N-lysine methyltransferase KMT5A, UNKNOWN ATOM OR ION
Authors:Yu, W, Tempel, W, Babault, N, Ma, A, Butler, K.V, Jin, J, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2016-08-30
Release date:2016-09-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Based Design of a Covalent Inhibitor of the SET Domain-Containing Protein 8 (SETD8) Lysine Methyltransferase.
J. Med. Chem., 59, 2016
5TH7
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BU of 5th7 by Molmil
Complex of SETD8 with MS453
Descriptor: 1,2-ETHANEDIOL, N-(3-{[6,7-dimethoxy-2-(pyrrolidin-1-yl)quinazolin-4-yl]amino}propyl)propanamide, N-lysine methyltransferase KMT5A, ...
Authors:Yu, W, Tempel, W, Babault, N, Ma, A, Butler, K.V, Jin, J, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2016-09-29
Release date:2016-11-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-Based Design of a Covalent Inhibitor of the SET Domain-Containing Protein 8 (SETD8) Lysine Methyltransferase.
J. Med. Chem., 59, 2016
2O3H
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BU of 2o3h by Molmil
Crystal structure of the human C65A Ape
Descriptor: ACETATE ION, DNA-(apurinic or apyrimidinic site) lyase, SAMARIUM (III) ION
Authors:Georgiadis, M.M, Gaur, R.K, Delaplane, S, Svenson, J.
Deposit date:2006-12-01
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolution of the redox function in mammalian apurinic/apyrimidinic endonuclease
Mutat.Res., 643, 2008
8K14
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BU of 8k14 by Molmil
X-ray crystal structure of 18a in BRD4(1)
Descriptor: 4-[8-methoxy-2-methyl-1-(1-phenylethyl)imidazo[4,5-c]quinolin-7-yl]-3,5-dimethyl-1,2-oxazole, Bromodomain-containing protein 4
Authors:Xu, H, Shen, H, Zhang, Y, Xu, Y, Li, R.
Deposit date:2023-07-10
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Discovery of (R)-4-(8-methoxy-2-methyl-1-(1-phenylethy)-1H-imidazo[4,5-c]quinnolin-7-yl)-3,5-dimethylisoxazole as a potent and selective BET inhibitor for treatment of acute myeloid leukemia (AML) guided by FEP calculation.
Eur.J.Med.Chem., 263, 2024
4I51
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BU of 4i51 by Molmil
Methyltransferase domain of HUMAN EUCHROMATIC HISTONE METHYLTRANSFERASE 1, mutant Y1211A
Descriptor: GLYCEROL, H3K9 NE-ALLYL PEPTIDE, Histone-lysine N-methyltransferase EHMT1, ...
Authors:Dong, A, Zeng, H, Walker, J.R, Islam, K, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Lou, M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2012-11-28
Release date:2012-12-19
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Defining efficient enzyme-cofactor pairs for bioorthogonal profiling of protein methylation.
Proc.Natl.Acad.Sci.USA, 110, 2013

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