Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5AGE
DownloadVisualize
BU of 5age by Molmil
CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A BENZOMORPHOLINONE LIGAND
Descriptor: 4-[(5-methyl-1,2-oxazol-3-yl)methyl]-7-[4-(1-methylpiperidin-4-yl)butyl]-2H-1,4-benzoxazin-3(4H)-one, GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, TETRADECANOYL-COA
Authors:Robinson, D.A, Spinks, D, Smith, V.C, Thompson, S, Smith, A, Torrie, L.S, McElroy, S.P, Brand, S, Brenk, R, Frearson, J.A, Read, K.D, Wyatt, P.G, Gilbert, I.H.
Deposit date:2015-01-29
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of Small-Molecule Trypanosoma Brucei N-Myristoyltransferase Inhibitors: Discovery and Optimisation of a Novel Binding Mode.
Chemmedchem, 10, 2015
3UC0
DownloadVisualize
BU of 3uc0 by Molmil
Crystal structure of domain I of the envelope glycoprotein ectodomain from dengue virus serotype 4 in complex with the fab fragment of the chimpanzee monoclonal antibody 5H2
Descriptor: GLYCEROL, Heavy chain, monoclonal antibody 5H2, ...
Authors:Cockburn, J.J.B, Stura, E.A, Navarro-Sanchez, M.E, Rey, F.A.
Deposit date:2011-10-25
Release date:2011-12-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural insights into the neutralization mechanism of a higher primate antibody against dengue virus.
Embo J., 31, 2012
7RF9
DownloadVisualize
BU of 7rf9 by Molmil
O2-, PLP-dependent desaturase Plu4 intermediate-bound enzyme
Descriptor: (2E)-5-carbamimidamido-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}pentanoic acid, 1,2-ETHANEDIOL, 2-(2-ETHOXYETHOXY)ETHANOL, ...
Authors:Hoffarth, E.R, Ryan, K.S.
Deposit date:2021-07-13
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.926 Å)
Cite:A shared mechanistic pathway for pyridoxal phosphate-dependent arginine oxidases.
Proc.Natl.Acad.Sci.USA, 118, 2021
7RGB
DownloadVisualize
BU of 7rgb by Molmil
O2-, PLP-dependent desaturase Plu4 product-bound enzyme
Descriptor: (2Z,4E)-5-carbamimidamido-2-iminopent-4-enoic acid, 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Hoffarth, E.R, Ryan, K.S.
Deposit date:2021-07-14
Release date:2021-10-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A shared mechanistic pathway for pyridoxal phosphate-dependent arginine oxidases.
Proc.Natl.Acad.Sci.USA, 118, 2021
5LOZ
DownloadVisualize
BU of 5loz by Molmil
STRUCTURE OF YEAST ENT1 ENTH DOMAIN
Descriptor: Epsin-1
Authors:Tanner, N, Prag, G.
Deposit date:2016-08-11
Release date:2016-10-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A bacterial genetic selection system for ubiquitylation cascade discovery.
Nat.Methods, 13, 2016
5LN1
DownloadVisualize
BU of 5ln1 by Molmil
STRUCTURE OF UBIQUITYLATED-RPN10 FROM YEAST;
Descriptor: 26S proteasome regulatory subunit RPN10, Polyubiquitin-B
Authors:Keren-Kaplan, T, Attali, I, Levin-Kravets, O, Prag, G.
Deposit date:2016-08-02
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structure of ubiquitylated-Rpn10 provides insight into its autoregulation mechanism.
Nat Commun, 7, 2016
5LP0
DownloadVisualize
BU of 5lp0 by Molmil
CRYSTAL STRUCTURE OF THE ZEBRA FISH ENTH DOMAIN FROM EPSIN1 IN 1.41 ANGSTROM RESOLUTION
Descriptor: Epsin 1, PHOSPHATE ION
Authors:Levin-Kravets, O, Prag, G.
Deposit date:2016-08-11
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:A bacterial genetic selection system for ubiquitylation cascade discovery.
Nat.Methods, 13, 2016
5N0A
DownloadVisualize
BU of 5n0a by Molmil
Crystal structure of A259C covalently linked dengue 2 virus envelope glycoprotein dimer in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 A11
Descriptor: BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11 HEAVY CHAIN, Envelope Glycoprotein E, ...
Authors:Vaney, M.C, Rouvinski, A, Guardado-Calvo, P, Sharma, A, Rey, F.A.
Deposit date:2017-02-02
Release date:2017-06-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Covalently linked dengue virus envelope glycoprotein dimers reduce exposure of the immunodominant fusion loop epitope.
Nat Commun, 8, 2017
6N44
DownloadVisualize
BU of 6n44 by Molmil
Sheep Galectin-11 (LGALS11) complex with glycerol
Descriptor: GLYCEROL, Galectin
Authors:Beddoe, T.C, Sakthivel, D.
Deposit date:2018-11-17
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:The oligomeric assembly of galectin-11 is critical for anti-parasitic activity in sheep (Ovis aries).
Commun Biol, 3, 2020
6UIN
DownloadVisualize
BU of 6uin by Molmil
Role of Beta-hairpin motifs in the DNA duplex opening by the Rad4/XPC nucleotide excision repair complex
Descriptor: DNA (5'-D(*AP*TP*TP*GP*TP*AP*GP*NP*NP*NP*NP*GP*GP*AP*TP*GP*TP*CP*GP*AP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*(G47)P*AP*CP*AP*TP*CP*CP*CP*CP*CP*CP*CP*TP*AP*CP*AP*A)-3'), DNA repair protein RAD4, ...
Authors:Paul, D, Min, J.-H.
Deposit date:2019-10-01
Release date:2020-10-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.348 Å)
Cite:Tethering-facilitated DNA 'opening' and complementary roles of beta-hairpin motifs in the Rad4/XPC DNA damage sensor protein
Nucleic Acids Res., 48, 2021
6UG1
DownloadVisualize
BU of 6ug1 by Molmil
Sequence impact in DNA duplex opening by the Rad4/XPC nucleotide excision repair complex
Descriptor: DNA (5'-D(*AP*TP*TP*GP*TP*AP*GP*GP*GP*AP*TP*GP*TP*CP*GP*AP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*(G47)P*AP*CP*AP*TP*CP*CP*CP*CP*TP*AP*CP*AP*A)-3'), DNA repair protein RAD4, ...
Authors:Paul, D, Min, J.-H.
Deposit date:2019-09-25
Release date:2021-03-31
Last modified:2021-09-08
Method:X-RAY DIFFRACTION (2.833 Å)
Cite:Impact of DNA sequences on DNA 'opening' by the Rad4/XPC nucleotide excision repair complex.
DNA Repair (Amst), 107, 2021
8OFN
DownloadVisualize
BU of 8ofn by Molmil
Structure of the yellow fever virus (Asibi strain) dimeric envelope protein
Descriptor: Envelope glycoprotein, SULFATE ION
Authors:Covernton, E, Vaney, M.C, Barba-Spaeth, G, Rey, F.A.
Deposit date:2023-03-16
Release date:2023-08-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:New insight into flavivirus maturation from structure/function studies of the yellow fever virus envelope protein complex.
Mbio, 14, 2023
6CG7
DownloadVisualize
BU of 6cg7 by Molmil
mouse cadherin-22 EC1-2 adhesive fragment
Descriptor: CALCIUM ION, Cadherin-22
Authors:Brasch, J, Harrison, O.J, Shapiro, L.
Deposit date:2018-02-19
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
6CGS
DownloadVisualize
BU of 6cgs by Molmil
mouse cadherin-7 EC1-2 adhesive fragment
Descriptor: CALCIUM ION, Cadherin-7, GLYCEROL
Authors:Brasch, J, Harrison, O.J, Kaczynska, A, Shapiro, L.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
6CG6
DownloadVisualize
BU of 6cg6 by Molmil
mouse cadherin-10 EC1-2 adhesive fragment
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cadherin-10, ...
Authors:Brasch, J, Harrison, O.J, Shapiro, L.
Deposit date:2018-02-19
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.707 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
6CGU
DownloadVisualize
BU of 6cgu by Molmil
mouse cadherin-6 EC1-2 adhesive fragment
Descriptor: CALCIUM ION, Cadherin-6
Authors:Brasch, J, Harrison, O.J, Shapiro, L.
Deposit date:2018-02-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
6CGB
DownloadVisualize
BU of 6cgb by Molmil
chimera of mouse cadherin-11 EC1 and mouse cadherin-6 EC2
Descriptor: ACETATE ION, CALCIUM ION, Cadherin-11, ...
Authors:Brasch, J, Harrison, O.J, Shapiro, L, Kaeser, B.
Deposit date:2018-02-19
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.994 Å)
Cite:Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
5LBS
DownloadVisualize
BU of 5lbs by Molmil
structural basis of Zika and Dengue virus potent antibody cross-neutralization
Descriptor: 1,2-ETHANEDIOL, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8, SULFATE ION, ...
Authors:Vaney, M.C, Rouvinski, A, Barba-Spaeth, G, Rey, F.A.
Deposit date:2016-06-17
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural basis of potent Zika-dengue virus antibody cross-neutralization.
Nature, 536, 2016
1URZ
DownloadVisualize
BU of 1urz by Molmil
Low pH induced, membrane fusion conformation of the envelope protein of tick-borne encephalitis virus
Descriptor: ENVELOPE PROTEIN
Authors:Bressanelli, S, Rey, F.A.
Deposit date:2003-11-16
Release date:2004-01-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of a Flavivirus Envelope Glycoprotein in its Low-Ph-Induced Membrane Fusion Conformation.
Embo J., 23, 2004
2WSA
DownloadVisualize
BU of 2wsa by Molmil
Crystal Structure of Leishmania major N-myristoyltransferase (NMT) with bound myristoyl-CoA and a pyrazole sulphonamide ligand (DDD85646)
Descriptor: 2,6-dichloro-4-(2-piperazin-1-ylpyridin-4-yl)-N-(1,3,5-trimethyl-1H-pyrazol-4-yl)benzenesulfonamide, GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, TETRADECANOYL-COA
Authors:Robinson, D.A, Brand, S, Fairlamb, A.H, Ferguson, M.A.J, Frearson, J.A, Wyatt, P.G, Structural Genomics Consortium (SGC)
Deposit date:2009-09-04
Release date:2010-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:N-Myristoyltransferase Inhibitors as New Leads to Treat Sleeping Sickness.
Nature, 464, 2010
3DS0
DownloadVisualize
BU of 3ds0 by Molmil
HIV-1 capsid C-terminal domain mutant (N183A) in complex with an inhibitor of particle assembly (CAI)
Descriptor: HIV-1 CAPSID PROTEIN, Peptide inhibitor of capsid assembly
Authors:Igonet, S, Vaney, M.C, Rey, F.A.
Deposit date:2008-07-11
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008
3DTJ
DownloadVisualize
BU of 3dtj by Molmil
HIV-1 capsid C-terminal domain mutant (E187A)
Descriptor: HIV-1 capsid protein
Authors:Igonet, S, Vaney, M.C, Rey, F.A.
Deposit date:2008-07-15
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (4 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008
3DS1
DownloadVisualize
BU of 3ds1 by Molmil
HIV-1 capsid C-terminal domain mutant (E187A) in complex with an inhibitor of particle assembly (CAI)
Descriptor: HIV-1 CAPSID PROTEIN, Peptide Inhibitor of capsid assembly
Authors:Vaney, M.-C, Igonet, S, Rey, F.A.
Deposit date:2008-07-11
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008
3DS2
DownloadVisualize
BU of 3ds2 by Molmil
HIV-1 capsid C-terminal domain mutant (Y169A)
Descriptor: HIV-1 CAPSID PROTEIN
Authors:Vaney, M.-C, Igonet, S, Rey, F.A.
Deposit date:2008-07-11
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008
3DS5
DownloadVisualize
BU of 3ds5 by Molmil
HIV-1 capsid C-terminal domain mutant (N183A)
Descriptor: HIV-1 CAPSID PROTEIN
Authors:Igonet, S, Vaney, M.C, Rey, F.A.
Deposit date:2008-07-11
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Residues in the HIV-1 Capsid Assembly Inhibitor Binding Site Are Essential for Maintaining the Assembly-competent Quaternary Structure of the Capsid Protein.
J.Biol.Chem., 283, 2008

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon