Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6V2D
DownloadVisualize
BU of 6v2d by Molmil
Crystal Structure of chromodomain of CDYL2 in complex with inhibitor UNC3866
Descriptor: Chromodomain Y-like protein 2, UNC3866, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2019-11-22
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for the Binding Selectivity of Human CDY Chromodomains.
Cell Chem Biol, 27, 2020
8CVZ
DownloadVisualize
BU of 8cvz by Molmil
Human glycogenin-1 and glycogen synthase-1 complex in the apo ordered state
Descriptor: Glycogen [starch] synthase, muscle, Glycogenin-1
Authors:Liu, Y, Fastman, N.M, Tzitzilonis, C.
Deposit date:2022-05-18
Release date:2022-07-13
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:The structural mechanism of human glycogen synthesis by the GYS1-GYG1 complex.
Cell Rep, 40, 2022
8CVY
DownloadVisualize
BU of 8cvy by Molmil
Human glycogenin-1 and glycogen synthase-1 complex in the apo mobile state
Descriptor: Glycogen [starch] synthase, muscle, Glycogenin-1
Authors:Liu, Y, Fastman, N.M, Tzitzilonis, C.
Deposit date:2022-05-18
Release date:2022-07-13
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The structural mechanism of human glycogen synthesis by the GYS1-GYG1 complex.
Cell Rep, 40, 2022
8CVX
DownloadVisualize
BU of 8cvx by Molmil
Human glycogenin-1 and glycogen synthase-1 complex in the presence of glucose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase, muscle, ...
Authors:Liu, Y, Fastman, N.M, Tzitzilonis, C.
Deposit date:2022-05-18
Release date:2022-07-13
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The structural mechanism of human glycogen synthesis by the GYS1-GYG1 complex.
Cell Rep, 40, 2022
4RZI
DownloadVisualize
BU of 4rzi by Molmil
Crystal structure of PhaB from Synechocystis sp. PCC 6803
Descriptor: 3-ketoacyl-acyl carrier protein reductase
Authors:Xue, S, Liu, Y.
Deposit date:2014-12-22
Release date:2015-09-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.891 Å)
Cite:Structure-directed construction of a high-performance version of the enzyme FabG from the photosynthetic microorganism Synechocystis sp. PCC 6803.
Febs Lett., 589, 2015
4XNR
DownloadVisualize
BU of 4xnr by Molmil
Vibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with Adenine
Descriptor: ADENINE, MAGNESIUM ION, Vibrio Vulnificus Adenine Riboswitch
Authors:Zhang, J, Liu, Y, Wang, Y.-X, Ferre-D'Amare, A.R.
Deposit date:2015-01-16
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Synthesis and applications of RNAs with position-selective labelling and mosaic composition.
Nature, 522, 2015
5T5A
DownloadVisualize
BU of 5t5a by Molmil
Crystal Structure of the Twister Sister (TS) Ribozyme at 2.0 Angstrom
Descriptor: DNA/RNA (71-MER), MAGNESIUM ION
Authors:Lilley, D.M.J, Liu, Y, Wilson, T.J.
Deposit date:2016-08-30
Release date:2017-03-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of a nucleolytic ribozyme that employs a catalytic metal ion.
Nat. Chem. Biol., 13, 2017
3PMG
DownloadVisualize
BU of 3pmg by Molmil
STRUCTURE OF RABBIT MUSCLE PHOSPHOGLUCOMUTASE AT 2.4 ANGSTROMS RESOLUTION. USE OF FREEZING POINT DEPRESSANT AND REDUCED TEMPERATURE TO ENHANCE DIFFRACTIVITY
Descriptor: MAGNESIUM ION, Phosphoglucomutase-1
Authors:Ray Junior, W.J, Liu, Y, Baranidharan, S.
Deposit date:1995-03-02
Release date:1995-12-07
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of rabbit muscle phosphoglucomutase refined at 2.4 A resolution.
Acta Crystallogr.,Sect.D, 53, 1997
6UPL
DownloadVisualize
BU of 6upl by Molmil
Structure of FACT_subnucleosome complex 2
Descriptor: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ...
Authors:Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K.
Deposit date:2019-10-17
Release date:2019-12-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:FACT caught in the act of manipulating the nucleosome.
Nature, 577, 2020
6UPK
DownloadVisualize
BU of 6upk by Molmil
Structure of FACT_subnucleosome complex 1
Descriptor: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ...
Authors:Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K.
Deposit date:2019-10-17
Release date:2019-12-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:FACT caught in the act of manipulating the nucleosome.
Nature, 577, 2020
6BPH
DownloadVisualize
BU of 6bph by Molmil
Crystal structure of the chromodomain of RBBP1
Descriptor: AT-rich interactive domain-containing protein 4A, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2017-11-23
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of chromo barrel domain of RBBP1.
Biochem. Biophys. Res. Commun., 496, 2018
2QAF
DownloadVisualize
BU of 2qaf by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-iodo-UMP
Descriptor: Orotidine 5' monophosphate decarboxylase, SULFATE ION, URIDINE-5'-MONOPHOSPHATE
Authors:Liu, Y, Lau, W, Bello, A.M, Kotra, L.P, Hui, R, Pai, E.F.
Deposit date:2007-06-15
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-activity relationships of C6-uridine derivatives targeting plasmodia orotidine monophosphate decarboxylase
J.Med.Chem., 51, 2008
2FYZ
DownloadVisualize
BU of 2fyz by Molmil
Structural of Mumps virus fusion protein core
Descriptor: Fusion glycoprotein F0
Authors:Lou, Z, Xu, Y, Liu, Y, Rao, Z.
Deposit date:2006-02-08
Release date:2007-04-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of mumps virus fusion protein core
Biochem.Biophys.Res.Commun., 348, 2006
3MI2
DownloadVisualize
BU of 3mi2 by Molmil
Crystal structure of human orotidine-5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
Descriptor: (1S)-1,4-anhydro-1-(5-carbamoyl-4-hydroxy-1H-pyrazol-3-yl)-5-O-phosphono-D-ribitol, Uridine 5'-monophosphate synthase
Authors:Liu, Y, To, T, Kotra, L.P, Pai, E.F.
Deposit date:2010-04-09
Release date:2010-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural determinants for the inhibitory ligands of orotidine-5'-monophosphate decarboxylase.
Bioorg.Med.Chem., 18, 2010
3MO7
DownloadVisualize
BU of 3mo7 by Molmil
Crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 2'-fluoro-6-iodo-UMP
Descriptor: 2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate), GLYCEROL, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2010-04-22
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Novel interactions of fluorinated nucleotide derivatives targeting orotidine 5'-monophosphate decarboxylase.
J.Med.Chem., 54, 2011
3G3D
DownloadVisualize
BU of 3g3d by Molmil
Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 5-fluoro-6-azido-UMP
Descriptor: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, GLYCEROL, SULFATE ION, ...
Authors:Liu, Y, Tang, H.L, Bello, A, Poduch, E, Kotra, L, Pai, E.
Deposit date:2009-02-02
Release date:2009-03-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-activity relationships of orotidine-5'-monophosphate decarboxylase inhibitors as anticancer agents.
J.Med.Chem., 52, 2009
3G3M
DownloadVisualize
BU of 3g3m by Molmil
Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 5-fluoro-6-iodo-UMP
Descriptor: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Tang, H.L, Bello, A.M, Poduch, E, Kotra, L.P, Pai, E.F.
Deposit date:2009-02-02
Release date:2009-03-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-activity relationships of orotidine-5'-monophosphate decarboxylase inhibitors as anticancer agents.
J.Med.Chem., 52, 2009
5IN1
DownloadVisualize
BU of 5in1 by Molmil
Crystal Structure of the MRG701 chromodomain
Descriptor: 1,2-ETHANEDIOL, MRG701, SULFATE ION
Authors:Huang, Y, Liu, Y.
Deposit date:2016-03-07
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural studies on MRG701 chromodomain reveal a novel dimerization interface of MRG proteins in green plants
Protein Cell, 7, 2016
5EG8
DownloadVisualize
BU of 5eg8 by Molmil
The cap binding site of influenza virus protein PB2 as a drug target
Descriptor: Polymerase basic protein 2, THIOCYANATE ION
Authors:Liu, Y, Zheng, X, Severin, C, Rocha de Moura, T, Li, K, Luo, M.
Deposit date:2015-10-26
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The cap-binding site of influenza virus protein PB2 as a drug target.
Acta Crystallogr D Struct Biol, 72, 2016
5EQ0
DownloadVisualize
BU of 5eq0 by Molmil
Crystal Structure of chromodomain of CBX8 in complex with inhibitor UNC3866
Descriptor: Chromobox protein homolog 8, UNKNOWN ATOM OR ION, unc3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-12
Release date:2015-12-23
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.
Nat.Chem.Biol., 12, 2016
5EPK
DownloadVisualize
BU of 5epk by Molmil
Crystal Structure of chromodomain of CBX2 in complex with inhibitor UNC3866
Descriptor: Chromobox protein homolog 2, UNKNOWN ATOM OR ION, unc3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-11
Release date:2015-12-23
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.
Nat.Chem.Biol., 12, 2016
5DF6
DownloadVisualize
BU of 5df6 by Molmil
Crystal structure of PTPN11 tandem SH2 domains in complex with a TXNIP peptide
Descriptor: Tyrosine-protein phosphatase non-receptor type 11, UNKNOWN ATOM OR ION, txnip
Authors:Dong, A, Li, W, Tempel, W, Liu, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-08-26
Release date:2015-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural basis for the regulatory role of the PPxY motifs in the thioredoxin-interacting protein TXNIP.
Biochem.J., 473, 2016
5EPL
DownloadVisualize
BU of 5epl by Molmil
Crystal Structure of chromodomain of CBX4 in complex with inhibitor UNC3866
Descriptor: E3 SUMO-protein ligase CBX4, UNKNOWN ATOM OR ION, unc3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-11
Release date:2015-12-23
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.
Nat.Chem.Biol., 12, 2016
4PLL
DownloadVisualize
BU of 4pll by Molmil
Structure of the chromodaomain of MRG2 in complex with H3K36me3
Descriptor: At1g02740, H3K36me3
Authors:Liu, Y, Huang, Y.
Deposit date:2014-05-18
Release date:2015-07-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression.
Plos Genet., 10, 2014
4PLI
DownloadVisualize
BU of 4pli by Molmil
Structure of the chromodomain of MRG2 in complex with H3K36me3
Descriptor: At1g02740, H3K36me3
Authors:Liu, Y, Huang, Y.
Deposit date:2014-05-18
Release date:2015-07-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression.
Plos Genet., 10, 2014

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon