Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7L5L
DownloadVisualize
BU of 7l5l by Molmil
Crystal structure of the DiB-RM protein
Descriptor: Lipocalin family protein, SULFATE ION
Authors:Bozhanova, N.G, Harp, J.M, Meiler, J.
Deposit date:2020-12-22
Release date:2021-10-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Computational redesign of a fluorogen activating protein with Rosetta.
Plos Comput.Biol., 17, 2021
7L5K
DownloadVisualize
BU of 7l5k by Molmil
Crystal structure of the DiB-RM protein
Descriptor: DODECYL-BETA-D-MALTOSIDE, ISOPROPYL ALCOHOL, Lipocalin family protein, ...
Authors:Bozhanova, N.G, Harp, J.M, Meiler, J.
Deposit date:2020-12-22
Release date:2021-10-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Computational redesign of a fluorogen activating protein with Rosetta.
Plos Comput.Biol., 17, 2021
7LG4
DownloadVisualize
BU of 7lg4 by Molmil
Green fluorescent protein from Aequorea macrodactyla - amacGFP
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Bozhanova, N.G, Meiler, J.
Deposit date:2021-01-19
Release date:2021-01-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Heterogeneity of the GFP fitness landscape and data-driven protein design.
Elife, 11, 2022
6P9H
DownloadVisualize
BU of 6p9h by Molmil
Crystal structure of human anti staphylococcus aureus antibody STAU-281 Fab in complex with IsdB NEAT2 domain
Descriptor: Human anti staphylococcus aureus antibody STAU-281 Fab heavy chain, Human anti staphylococcus aureus antibody STAU-281 Fab light chain, Iron-regulated heme-iron binding protein
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
5WEQ
DownloadVisualize
BU of 5weq by Molmil
The crystal structure of a MR78 mutant
Descriptor: MR78 mutant Fab heavy chain, MR78 mutant light chain
Authors:Dong, J, Williamson, L.E, Crowe, J.E.
Deposit date:2017-07-10
Release date:2018-04-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of Non-local Interactions between CDR Loops in Binding Affinity of MR78 Antibody to Marburg Virus Glycoprotein.
Structure, 25, 2017
6WC6
DownloadVisualize
BU of 6wc6 by Molmil
Crystal structure of a truncated LSD1:CoREST in the presence of an LSD1-NT peptide
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LSD1-NT peptide, Lysine-specific histone demethylase 1A, ...
Authors:Reiter, N.J, Zeng, D, Senanayaka, D.
Deposit date:2020-03-29
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Identification of structure and nucleosome binding within the N-terminus of lysine specific demethylase 1
To Be Published
4YAQ
DownloadVisualize
BU of 4yaq by Molmil
Crystal structure of a computationally optimized PG9 mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PG9_N100FY Fab heavy chain, ...
Authors:Murrell, S, Julien, J.P, Wilson, I.A.
Deposit date:2015-02-17
Release date:2015-06-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Redesigned HIV antibodies exhibit enhanced neutralizing potency and breadth.
J.Clin.Invest., 125, 2015
7U0C
DownloadVisualize
BU of 7u0c by Molmil
Crystal structure of broadly neutralizing antibody HEPC3.4
Descriptor: HEPC3.4 Fab Heavy Chain, HEPC3.4 Fab Light Chain
Authors:Flyak, A.I, Bjorkman, P.J.
Deposit date:2022-02-17
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Computational identification of HCV neutralizing antibodies with a common HCDR3 disulfide bond motif in the antibody repertoires of infected individuals.
Nat Commun, 13, 2022
7U0B
DownloadVisualize
BU of 7u0b by Molmil
Crystal structure of broadly neutralizing antibody HEPC3.1
Descriptor: HEPC3.1 Fab Heavy Chain, HEPC3.1 Fab Light Chain
Authors:Flyak, A.I, Bjorkman, P.J.
Deposit date:2022-02-17
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Computational identification of HCV neutralizing antibodies with a common HCDR3 disulfide bond motif in the antibody repertoires of infected individuals.
Nat Commun, 13, 2022
6P9J
DownloadVisualize
BU of 6p9j by Molmil
crystal structure of human anti staphylococcus aureus antibody STAU-229 Fab
Descriptor: TRIS(HYDROXYETHYL)AMINOMETHANE, human anti staphylococcus aureus antibody STAU-229 Fab heavy chain, human anti staphylococcus aureus antibody STAU-229 Fab light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
6P9I
DownloadVisualize
BU of 6p9i by Molmil
crystal structure of human anti staphylococcus aureus antibody STAU-399 Fab
Descriptor: human anti staphylococcus aureus antibody STAU-399 Fab heavy chain, human anti staphylococcus aureus antibody STAU-399 Fab light chain
Authors:Dong, J, Crowe, J.E.
Deposit date:2019-06-10
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human V H 1-69 Gene-Encoded Human Monoclonal Antibodies against Staphylococcus aureus IsdB Use at Least Three Distinct Modes of Binding To Inhibit Bacterial Growth and Pathogenesis.
Mbio, 10, 2019
5JRP
DownloadVisualize
BU of 5jrp by Molmil
crystal structure of monoclonal antibody MR78 Fab
Descriptor: SODIUM ION, marberg virus monoclonal antibody MR78 Fab heavy chain, marberg virus monoclonal antibody MR78 Fab light chain
Authors:Dong, J, Crowe, J.
Deposit date:2016-05-06
Release date:2017-11-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of Non-local Interactions between CDR Loops in Binding Affinity of MR78 Antibody to Marburg Virus Glycoprotein.
Structure, 25, 2017
3TDM
DownloadVisualize
BU of 3tdm by Molmil
Computationally designed TIM-barrel protein, HalfFLR
Descriptor: Computationally designed two-fold symmetric TIM-barrel protein, FLR (half molecule), PHOSPHATE ION
Authors:Harp, J.M, Fortenberry, C, Bowman, E, Profitt, W, Dorr, B, Mizoue, L.
Deposit date:2011-08-11
Release date:2011-11-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Exploring symmetry as an avenue to the computational design of large protein domains.
J.Am.Chem.Soc., 133, 2011
8DBZ
DownloadVisualize
BU of 8dbz by Molmil
CryoEM structure of Hantavirus ANDV Gn(H) protein complex with 2Fabs ANDV-5 and ANDV-34
Descriptor: COV44-79 heavy chain constant domain, Fab Fc (L) KappaC, Fv (H) ANDV-34, ...
Authors:Binshtein, E, Crowe, J.E.
Deposit date:2022-06-15
Release date:2023-04-05
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Antigenic mapping and functional characterization of human new world hantavirus neutralizing antibodies.
Elife, 12, 2023
7SC0
DownloadVisualize
BU of 7sc0 by Molmil
CryoEM structure of the Caveolin-1 8S complex
Descriptor: Caveolin-1
Authors:Porta, J.P, Ohi, M.D, Kenworthy, A.K, Karakas, E.
Deposit date:2021-09-26
Release date:2022-05-25
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular architecture of the human caveolin-1 complex.
Sci Adv, 8, 2022
4ZV6
DownloadVisualize
BU of 4zv6 by Molmil
Crystal structure of the artificial alpharep-7 octarellinV.1 complex
Descriptor: AlphaRep-7, Octarellin V.1
Authors:Figueroa, M, Sleutel, M, Urvoas, A, Valerio-Lepiniec, M, Minard, P, Martial, J.A, van de Weerdt, C.
Deposit date:2015-05-18
Release date:2016-05-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:The unexpected structure of the designed protein Octarellin V.1 forms a challenge for protein structure prediction tools.
J.Struct.Biol., 195, 2016
6NLE
DownloadVisualize
BU of 6nle by Molmil
X-ray structure of LeuT with V269 deletion
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Navratna, V, Yang, D, Gouaux, E.
Deposit date:2019-01-08
Release date:2020-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.615 Å)
Cite:Structural, functional, and behavioral insights of dopamine dysfunction revealed by a deletion inSLC6A3.
Proc.Natl.Acad.Sci.USA, 116, 2019
5BOP
DownloadVisualize
BU of 5bop by Molmil
Crystal structure of the artificial nanobody octarellinV.1 complex
Descriptor: Nanobody, Octarellin V.1
Authors:Figueroa, M, Sleutel, M, Pardon, E, Steyaert, J, Martial, J.A, van de Weerdt, C.
Deposit date:2015-05-27
Release date:2016-05-25
Last modified:2016-06-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The unexpected structure of the designed protein Octarellin V.1 forms a challenge for protein structure prediction tools.
J.Struct.Biol., 195, 2016
4HFW
DownloadVisualize
BU of 4hfw by Molmil
Anti Rotavirus Antibody
Descriptor: 6-26 Fab Heavy chain, 6-26 Fab Light chain, SULFATE ION
Authors:Spiller, B.W, Aiyegbo, M, Crowe, J.E.
Deposit date:2012-10-05
Release date:2013-05-29
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Human Rotavirus VP6-Specific Antibodies Mediate Intracellular Neutralization by Binding to a Quaternary Structure in the Transcriptional Pore.
Plos One, 8, 2013
4GSD
DownloadVisualize
BU of 4gsd by Molmil
H5.3 Fab Structure
Descriptor: H5.3 Fab Heavy Chain, H5.3 Fab Light Chain
Authors:Spiller, B.W, Winarski, K.L.
Deposit date:2012-08-27
Release date:2013-08-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Human antibodies that neutralize respiratory droplet transmissible H5N1 influenza viruses.
J.Clin.Invest., 123, 2013
5ITB
DownloadVisualize
BU of 5itb by Molmil
Crystal structure of the anti-RSV F Fab 14N4
Descriptor: anti-RSV F Fab 14N4 Heavy chain, anti-RSV F Fab 14N4 Light chain
Authors:Mousa, J.J, Crowe, J.E.
Deposit date:2016-03-16
Release date:2016-10-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for nonneutralizing antibody competition at antigenic site II of the respiratory syncytial virus fusion protein.
Proc.Natl.Acad.Sci.USA, 113, 2016
5J3D
DownloadVisualize
BU of 5j3d by Molmil
Crystal structure of human Fab 14N4 in complex with post-fusion RSV F
Descriptor: 14N4 heavy chain, 14N4 light chain, Fusion glycoprotein F0
Authors:Mousa, J.J, Crowe, J.E.
Deposit date:2016-03-30
Release date:2016-10-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.077 Å)
Cite:Structural basis for nonneutralizing antibody competition at antigenic site II of the respiratory syncytial virus fusion protein.
Proc.Natl.Acad.Sci.USA, 113, 2016
7LQK
DownloadVisualize
BU of 7lqk by Molmil
Crystal structure of the R375A mutant of LeuT
Descriptor: ALANINE, Na(+):neurotransmitter symporter (Snf family), SODIUM ION, ...
Authors:Font, J, Aguilar, J, Galli, A, Ryan, R.
Deposit date:2021-02-13
Release date:2021-05-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Psychomotor impairments and therapeutic implications revealed by a mutation associated with infantile Parkinsonism-Dystonia.
Elife, 10, 2021
7LQJ
DownloadVisualize
BU of 7lqj by Molmil
Crystal structure of LeuT bound to L-Alanine
Descriptor: ALANINE, Na(+):neurotransmitter symporter (Snf family), SODIUM ION, ...
Authors:Font, J, Aguilar, J, Galli, A, Ryan, R.
Deposit date:2021-02-13
Release date:2021-05-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.144 Å)
Cite:Psychomotor impairments and therapeutic implications revealed by a mutation associated with infantile Parkinsonism-Dystonia.
Elife, 10, 2021
7LQL
DownloadVisualize
BU of 7lql by Molmil
Crystal structure of the R375D mutant of LeuT
Descriptor: ALANINE, Na(+):neurotransmitter symporter (Snf family), SODIUM ION, ...
Authors:Font, J, Aguilar, J, Galli, A, Ryan, R.
Deposit date:2021-02-13
Release date:2021-05-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Psychomotor impairments and therapeutic implications revealed by a mutation associated with infantile Parkinsonism-Dystonia.
Elife, 10, 2021

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon