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6XBZ
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BU of 6xbz by Molmil
Structure of the human CDK-activating kinase
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Greber, B.J, Perez-Bertoldi, J.M, Lim, K, Iavarone, A.T, Toso, D.B, Nogales, E.
Deposit date:2020-06-07
Release date:2020-09-09
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:The cryoelectron microscopy structure of the human CDK-activating kinase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6XD3
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BU of 6xd3 by Molmil
Structure of the human CAK in complex with THZ1
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Greber, B.J, Perez-Bertoldi, J.M, Lim, K, Iavarone, A.T, Toso, D.B, Nogales, E.
Deposit date:2020-06-09
Release date:2020-09-09
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The cryoelectron microscopy structure of the human CDK-activating kinase.
Proc.Natl.Acad.Sci.USA, 117, 2020
4CMQ
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BU of 4cmq by Molmil
Crystal structure of Mn-bound S.pyogenes Cas9
Descriptor: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MANGANESE (II) ION, SULFATE ION
Authors:Jinek, M, Jiang, F, Taylor, D.W, Sternberg, S.H, Kaya, E, Ma, E, Anders, C, Hauer, M, Zhou, K, Lin, S, Kaplan, M, Iavarone, A.T, Charpentier, E, Nogales, E, Doudna, J.A.
Deposit date:2014-01-17
Release date:2014-02-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structures of Cas9 Endonucleases Reveal RNA- Mediated Conformational Activation
Science, 343, 2014
4CMP
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BU of 4cmp by Molmil
Crystal structure of S. pyogenes Cas9
Descriptor: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, SULFATE ION
Authors:Jinek, M, Jiang, F, Taylor, D.W, Sternberg, S.H, Kaya, E, Ma, E, Anders, C, Hauer, M, Zhou, K, Lin, S, Kaplan, M, Iavarone, A.T, Charpentier, E, Nogales, E, Doudna, J.A.
Deposit date:2014-01-16
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational Activation.
Science, 343, 2014
9MHF
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BU of 9mhf by Molmil
Cryo-EM reconstruction of PI3KC3-C1 in complex with Human RAB1A(Q70L)
Descriptor: Beclin 1-associated autophagy-related key regulator, Beclin-1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Cook, A.S.I, Hurley, J.H, Chen, M.
Deposit date:2024-12-11
Release date:2025-02-12
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Structural pathway for class III PI 3-kinase activation by the myristoylated GTPbinding pseudokinase VPS15
To Be Published
2XHY
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BU of 2xhy by Molmil
Crystal Structure of E.coli BglA
Descriptor: 6-PHOSPHO-BETA-GLUCOSIDASE BGLA, BROMIDE ION, SULFATE ION
Authors:Totir, M, Zubieta, C, Echols, N, May, A.P, Gee, C.L, nanao, M, alber, T.
Deposit date:2010-06-24
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Macro-to-Micro Structural Proteomics: Native Source Proteins for High-Throughput Crystallization.
Plos One, 7, 2012
8VIY
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BU of 8viy by Molmil
15-Lipoxygenase-2 V427L
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, FE (II) ION, ...
Authors:Gilbert, N.C, Offenbacher, A.R, Ohler, A.R.L.
Deposit date:2024-01-05
Release date:2024-12-11
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Identification of the Thermal Activation Network in Human 15-Lipoxygenase-2: Divergence from Plant Orthologs and Its Relationship to Hydrogen Tunneling Activation Barriers.
Acs Catalysis, 14, 2024
5T5V
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BU of 5t5v by Molmil
LIPOXYGENASE-1 (SOYBEAN) AT 293K
Descriptor: FE (III) ION, Seed linoleate 13S-lipoxygenase-1
Authors:Poss, E.M, Fraser, J.S.
Deposit date:2016-08-31
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hydrogen-Deuterium Exchange of Lipoxygenase Uncovers a Relationship between Distal, Solvent Exposed Protein Motions and the Thermal Activation Barrier for Catalytic Proton-Coupled Electron Tunneling.
ACS Cent Sci, 3, 2017
3SBO
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BU of 3sbo by Molmil
Structure of E.coli GDH from native source
Descriptor: CHLORIDE ION, NADP-specific glutamate dehydrogenase
Authors:Gee, C.L, Zubieta, C, Echols, N, Totir, M.
Deposit date:2011-06-06
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.204 Å)
Cite:Macro-to-Micro Structural Proteomics: Native Source Proteins for High-Throughput Crystallization.
Plos One, 7, 2012
7LAF
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BU of 7laf by Molmil
15-lipoxygenase-2 loop mutant bound to imidazole-based inhibitor
Descriptor: 3-{[(4-methylphenyl)methyl]sulfanyl}-1-phenyl-1H-1,2,4-triazole, MANGANESE (II) ION, Polyunsaturated fatty acid lipoxygenase ALOX15B
Authors:Newcomer, M.E, Gilbert, N.C, Neau, D.B.
Deposit date:2021-01-06
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Kinetic and structural investigations of novel inhibitors of human epithelial 15-lipoxygenase-2.
Bioorg.Med.Chem., 46, 2021
5TQP
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BU of 5tqp by Molmil
LIPOXYGENASE-1 (SOYBEAN) I553G MUTANT AT 300K
Descriptor: FE (III) ION, Seed linoleate 13S-lipoxygenase-1
Authors:Poss, E.M, Fraser, J.S.
Deposit date:2016-10-24
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hydrogen-Deuterium Exchange of Lipoxygenase Uncovers a Relationship between Distal, Solvent Exposed Protein Motions and the Thermal Activation Barrier for Catalytic Proton-Coupled Electron Tunneling.
ACS Cent Sci, 3, 2017
4OGC
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BU of 4ogc by Molmil
Crystal structure of the Type II-C Cas9 enzyme from Actinomyces naeslundii
Descriptor: ACETATE ION, HNH endonuclease domain protein, MAGNESIUM ION, ...
Authors:Jiang, F, Ma, E, Lin, S, Doudna, J.A.
Deposit date:2014-01-15
Release date:2014-02-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of Cas9 endonucleases reveal RNA-mediated conformational activation.
Science, 343, 2014
6E13
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BU of 6e13 by Molmil
Pseudomonas putida PqqB with a non-physiological zinc at the active site binds the substrate mimic, 5-cysteinyl-3,4-dihydroxyphenylalanine (5-Cys-DOPA), non-specifically but supports the proposed function of the enzyme in pyrroloquinoline quinone biosynthesis.
Descriptor: 3-{[(2S)-2-amino-2-carboxyethyl]sulfanyl}-5-hydroxy-L-tyrosine, CHLORIDE ION, Coenzyme PQQ synthesis protein B, ...
Authors:Evans III, R.L, Wilmot, C.M.
Deposit date:2018-07-09
Release date:2019-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.349 Å)
Cite:Discovery of Hydroxylase Activity for PqqB Provides a Missing Link in the Pyrroloquinoline Quinone Biosynthetic Pathway.
J.Am.Chem.Soc., 141, 2019
4OGE
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BU of 4oge by Molmil
Crystal structure of the Type II-C Cas9 enzyme from Actinomyces naeslundii
Descriptor: HNH endonuclease domain protein, MAGNESIUM ION, SPERMIDINE, ...
Authors:Jiang, F, Ma, E, Lin, S, Doudna, J.A.
Deposit date:2014-01-15
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structures of Cas9 endonucleases reveal RNA-mediated conformational activation.
Science, 343, 2014
9MHH
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BU of 9mhh by Molmil
PI3KC3-C1 in complex with RAB1A. VPS34 kinase domain active conformation
Descriptor: Beclin 1-associated autophagy-related key regulator, Beclin-1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Cook, A.S.I, Hurley, J.H, Chen, M.
Deposit date:2024-12-11
Release date:2025-02-12
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural pathway for class III PI 3-kinase activation by the myristoylated GTPbinding pseudokinase VPS15
To Be Published
9MHG
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BU of 9mhg by Molmil
Cryo EM reconstruction of PI3KC3-C1 in complex with Human RAB1A(Q70L), VPS34 kinase domain in the inactive conformation
Descriptor: Beclin 1-associated autophagy-related key regulator, Beclin-1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Cook, A.S.I, Hurley, J.H, Chen, M.
Deposit date:2024-12-11
Release date:2025-02-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural pathway for class III PI 3-kinase activation by the myristoylated GTPbinding pseudokinase VPS15
To Be Published
6MEM
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BU of 6mem by Molmil
A unique supramolecular organization of photosystem I in the moss Physcomitrella patens
Descriptor: Chlorophyll A/B binding protein 1, Chlorophyll A/B binding protein 10, Chlorophyll A/B binding protein 11, ...
Authors:Iwai, M, Grob, P.
Deposit date:2018-09-06
Release date:2018-11-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (11.6 Å)
Cite:A unique supramolecular organization of photosystem I in the moss Physcomitrella patens.
Nat Plants, 4, 2018
3NBU
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BU of 3nbu by Molmil
Crystal structure of pGI glucosephosphate isomerase
Descriptor: CHLORIDE ION, Glucose-6-phosphate isomerase
Authors:Alber, T, Zubieta, C, Totir, M, May, A, Echols, N.
Deposit date:2010-06-04
Release date:2011-06-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Macro-to-Micro Structural Proteomics: Native Source Proteins for High-Throughput Crystallization.
Plos One, 7, 2012
3N6Q
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BU of 3n6q by Molmil
Crystal structure of YghZ from E. coli
Descriptor: MAGNESIUM ION, YghZ aldo-keto reductase
Authors:Zubieta, C, Totir, M, Echols, N, May, A, Alber, T.
Deposit date:2010-05-26
Release date:2011-06-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Macro-to-Micro Structural Proteomics: Native Source Proteins for High-Throughput Crystallization.
Plos One, 7, 2012
4QSK
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BU of 4qsk by Molmil
Crystal Structure of L. monocytogenes Pyruvate Carboxylase in complex with Cyclic-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CITRATE ANION, MANGANESE (II) ION, ...
Authors:Choi, P.H, Tong, L.
Deposit date:2014-07-04
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Cyclic Dinucleotide c-di-AMP Is an Allosteric Regulator of Metabolic Enzyme Function.
Cell(Cambridge,Mass.), 158, 2014
4QSH
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BU of 4qsh by Molmil
Crystal Structure of L. monocytogenes Pyruvate Carboxylase in complex with Cyclic-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, CITRATE ANION, MANGANESE (II) ION, ...
Authors:Choi, P.H, Tong, L.
Deposit date:2014-07-04
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:The Cyclic Dinucleotide c-di-AMP Is an Allosteric Regulator of Metabolic Enzyme Function.
Cell(Cambridge,Mass.), 158, 2014
4QSL
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BU of 4qsl by Molmil
Crystal Structure of Listeria Monocytogenes Pyruvate Carboxylase
Descriptor: Pyruvate carboxylase
Authors:Choi, P.H, Tong, L.
Deposit date:2014-07-04
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:The Cyclic Dinucleotide c-di-AMP Is an Allosteric Regulator of Metabolic Enzyme Function.
Cell(Cambridge,Mass.), 158, 2014
3F61
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BU of 3f61 by Molmil
Crystal Structure of M. tuberculosis PknB Leu33Asp/Val222Asp double mutant in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Serine/threonine-protein kinase pknB
Authors:Mieczkowski, C.A, Alber, T, TB Structural Genomics Consortium (TBSGC)
Deposit date:2008-11-05
Release date:2008-12-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Auto-activation mechanism of the Mycobacterium tuberculosis PknB receptor Ser/Thr kinase.
Embo J., 27, 2008
3F69
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BU of 3f69 by Molmil
Crystal structure of the Mycobacterium tuberculosis PknB mutant kinase domain in complex with KT5720
Descriptor: SULFATE ION, Serine/threonine-protein kinase pknB, hexyl (5S,6R,8R)-6-hydroxy-5-methyl-13-oxo-5,6,7,8-tetrahydro-13H-5,8-epoxy-4b,8a,14-triazadibenzo[b,h]cycloocta[1,2,3,4-jkl]c yclopenta[e]-as-indacene-6-carboxylate
Authors:Alber, T, Mieczkowski, C.A, TB Structural Genomics Consortium (TBSGC)
Deposit date:2008-11-05
Release date:2008-12-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Auto-activation mechanism of the Mycobacterium tuberculosis PknB receptor Ser/Thr kinase.
Embo J., 27, 2008
7SOI
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BU of 7soi by Molmil
Structure of I552A Soybean Lipoxygenase at 277K
Descriptor: FE (III) ION, Lipoxygenase, SODIUM ION
Authors:Gee, C.L, Offenbacher, A.R, Hu, S.
Deposit date:2021-10-31
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Temporal and spatial resolution of distal protein motions that activate hydrogen tunneling in soybean lipoxygenase.
Proc.Natl.Acad.Sci.USA, 120, 2023

 

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