Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3EZV
DownloadVisualize
BU of 3ezv by Molmil
CDK-2 with indazole inhibitor 9 bound at its active site
Descriptor: 4-{3-[7-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl}aniline, Cell division protein kinase 2
Authors:Kiefer, J.R, Day, J.E, Caspers, N.L, Mathis, K.J, Kretzmer, K.K, Weinberg, R.A, Reitz, B.A, Stegeman, R.A, Trujillo, J.I, Huang, W, Thorarensen, A, Xing, L, Wrightstone, A, Christine, L, Compton, R, Li, X.
Deposit date:2008-10-23
Release date:2009-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: Design and synthesis of a potent and isoform selective PKC-zeta inhibitor
Bioorg.Med.Chem.Lett., 19, 2009
4LOG
DownloadVisualize
BU of 4log by Molmil
The crystal structure of the orphan nuclear receptor PNR ligand binding domain fused with MBP
Descriptor: Maltose ABC transporter periplasmic protein and NR2E3 protein chimeric construct
Authors:Tan, M.E, Zhou, X.E, Soon, F.-F, Li, X, Li, J, Yong, E.-L, Melcher, K, Xu, H.E.
Deposit date:2013-07-12
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Crystal Structure of the Orphan Nuclear Receptor NR2E3/PNR Ligand Binding Domain Reveals a Dimeric Auto-Repressed Conformation.
Plos One, 8, 2013
5AGT
DownloadVisualize
BU of 5agt by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct (S)-3-(Aminomethyl)-4-chloro-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 4-Chloro-3-aminomethyl-7-[ethoxy]-3H-benzo[C][1,2]oxaborol-1-ol modified adenosine, GLYCEROL, LEUCINE--TRNA LIGASE, ...
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5AGS
DownloadVisualize
BU of 5ags by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct 3-(Aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 3-(AMINOMETHYL)-4-BROMO-7-ETHOXYBENZO[C][1,2]OXABOROL-1(3H)-OL-MODIFIED ADENOSINE, LEUCYL-TRNA SYNTHETASE, METHIONINE
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5XWY
DownloadVisualize
BU of 5xwy by Molmil
Electron cryo-microscopy structure of LbuCas13a-crRNA binary complex
Descriptor: A type VI-A CRISPR-Cas RNA-guided RNA ribonuclease, Cas13a, RNA (59-MER)
Authors:Zhang, X, Wang, Y, Ma, J, Liu, L, Li, X, Li, Z, You, L, Wang, J, Wang, M.
Deposit date:2017-06-30
Release date:2017-09-13
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The Molecular Architecture for RNA-Guided RNA Cleavage by Cas13a.
Cell, 170, 2017
5XMI
DownloadVisualize
BU of 5xmi by Molmil
Cryo-EM Structure of the ATP-bound VPS4 mutant-E233Q hexamer (masked)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Vacuolar protein sorting-associated protein 4
Authors:Sun, S, Li, L, Yang, F, Wang, X, Fan, F, Li, X, Wang, H, Sui, S.
Deposit date:2017-05-15
Release date:2017-08-09
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of the ATP-bound Vps4(E233Q) hexamer and its complex with Vta1 at near-atomic resolution
Nat Commun, 8, 2017
5AGR
DownloadVisualize
BU of 5agr by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct (S)-3-(Aminomethyl)-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 1,2-ETHANEDIOL, 3-AMINOMETHYL-7-(ETHOXY)-3H-BENZO[C][1,2]OXABOROL-1-OL modified adenosine, LEUCINE, ...
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5CN1
DownloadVisualize
BU of 5cn1 by Molmil
Crystal structure of yeast GGA1_GAE domain-P21
Descriptor: ADP-ribosylation factor-binding protein GGA1
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis for the accessory protein recruitment by yeast GGA1_GAE domain
To Be Published
5CMY
DownloadVisualize
BU of 5cmy by Molmil
Crystal structure of yeast Ent5 N-terminal domain-native
Descriptor: Epsin-5, GLYCEROL
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural and functional insight into the N-terminal domain of the clathrin adaptor Ent5 from Saccharomyces cerevisiae
Biochem.Biophys.Res.Commun., 477, 2016
5CMW
DownloadVisualize
BU of 5cmw by Molmil
Crystal structure of yeast Ent5 N-terminal domain-soaked in KI
Descriptor: Epsin-5, GLYCEROL, IODIDE ION
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional insight into the N-terminal domain of the clathrin adaptor Ent5 from Saccharomyces cerevisiae
Biochem.Biophys.Res.Commun., 477, 2016
5CN2
DownloadVisualize
BU of 5cn2 by Molmil
Crystal structure of yeast GGA1_GAE domain-C2221
Descriptor: ADP-ribosylation factor-binding protein GGA1
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the accessory protein recruitment by yeast GGA1_GAE domain
To Be Published
5D68
DownloadVisualize
BU of 5d68 by Molmil
Crystal structure of KRIT1 ARD-FERM
Descriptor: Krev interaction trapped protein 1
Authors:Zhang, R, Li, X, Boggon, T.J.
Deposit date:2015-08-11
Release date:2015-10-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.908 Å)
Cite:Structural analysis of the KRIT1 ankyrin repeat and FERM domains reveals a conformationally stable ARD-FERM interface.
J.Struct.Biol., 192, 2015
6L4S
DownloadVisualize
BU of 6l4s by Molmil
cryo-em structure of alpha-synuclein fiber mutation type E46K
Descriptor: Alpha-synuclein
Authors:Li, Y.W, Zhao, K, Liu, C, Li, X.
Deposit date:2019-10-21
Release date:2020-04-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Parkinson's disease associated mutation E46K of alpha-synuclein triggers the formation of a distinct fibril structure.
Nat Commun, 11, 2020
8TZS
DownloadVisualize
BU of 8tzs by Molmil
Structure of human WLS
Descriptor: Protein wntless homolog
Authors:Qi, X, Hu, Q, Li, X.
Deposit date:2023-08-27
Release date:2023-10-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Molecular basis of Wnt biogenesis, secretion, and Wnt7-specific signaling.
Cell, 186, 2023
8TZP
DownloadVisualize
BU of 8tzp by Molmil
Structure of human Wnt7a bound to WLS and RECK
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, PALMITOLEIC ACID, Protein Wnt-7a, ...
Authors:Qi, X, Hu, Q, Li, X.
Deposit date:2023-08-27
Release date:2023-10-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Molecular basis of Wnt biogenesis, secretion, and Wnt7-specific signaling.
Cell, 186, 2023
8TZR
DownloadVisualize
BU of 8tzr by Molmil
Structure of human Wnt3a bound to WLS and CALR
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Calreticulin, PALMITOLEIC ACID, ...
Authors:Qi, X, Hu, Q, Li, X.
Deposit date:2023-08-27
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of human Wnt3a bound to WLS and CALR
To Be Published
8TZO
DownloadVisualize
BU of 8tzo by Molmil
Structure of human Wnt7a bound to WLS and CALR
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, Calreticulin, ...
Authors:Qi, X, Hu, Q, Li, X.
Deposit date:2023-08-27
Release date:2023-10-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular basis of Wnt biogenesis, secretion, and Wnt7-specific signaling.
Cell, 186, 2023
5EBG
DownloadVisualize
BU of 5ebg by Molmil
Crystal structure of bovine CD8aa homodimer
Descriptor: T-cell surface glycoprotein CD8 alpha chain
Authors:Liu, Y, Li, X, Zhang, N, Qi, J, Xia, C.
Deposit date:2015-10-19
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structural basis of chicken, swine and bovine CD8 alpha alpha dimers provides insight into the co-evolution with MHC I in endotherm species.
Sci Rep, 6, 2016
5XWP
DownloadVisualize
BU of 5xwp by Molmil
Crystal structure of LbuCas13a-crRNA-target RNA ternary complex
Descriptor: RNA (30-MER), RNA (59-MER), Uncharacterized protein
Authors:Liu, L, Li, X, Li, Z, Wang, Y.
Deposit date:2017-06-30
Release date:2017-09-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.086 Å)
Cite:The Molecular Architecture for RNA-Guided RNA Cleavage by Cas13a.
Cell, 170, 2017
5EG3
DownloadVisualize
BU of 5eg3 by Molmil
Crystal Structure of the Activated FGF Receptor 2 (FGFR2) Kinase Domain in complex with the cSH2 domain of Phospholipase C gamma (PLCgamma)
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1, Fibroblast growth factor receptor 2, MAGNESIUM ION, ...
Authors:Huang, Z, Li, X, Mohammadi, M.
Deposit date:2015-10-26
Release date:2016-02-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.606 Å)
Cite:Two FGF Receptor Kinase Molecules Act in Concert to Recruit and Transphosphorylate Phospholipase C gamma.
Mol.Cell, 61, 2016
5FO4
DownloadVisualize
BU of 5fo4 by Molmil
Crystal structure of the P.falciparum cytosolic leucyl-tRNA synthetase editing domain (space group P1)
Descriptor: LEUCYL TRNA SYNTHASE
Authors:Palencia, A, Sonoiki, E, Guo, D, Ahyong, V, Dong, C, Li, X, Hernandez, V.S, Gut, J, Legac, J, Cooper, R, Alley, M.R.K, Freund, Y.R, DeRisi, J, Cusack, S, Rosenthal, P.J.
Deposit date:2015-11-18
Release date:2016-06-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Anti-Malarial Benzoxaboroles Target P. Falciparum Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5FOD
DownloadVisualize
BU of 5fod by Molmil
Crystal structure of the P.falciparum cytosolic leucyl-tRNA synthetase editing domain (space group P1) containing deletions of insertions 1 and 3
Descriptor: 1,2-ETHANEDIOL, LEUCYL-TRNA SYNTHETASE
Authors:Palencia, A, Sonoiki, E, Guo, D, Ahyong, V, Dong, C, Li, X, Hernandez, V.S, Gut, J, Legac, J, Cooper, R, Alley, M.R.K, Freund, Y.R, DeRisi, J, Cusack, S, Rosenthal, P.J.
Deposit date:2015-11-19
Release date:2016-06-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Anti-Malarial Benzoxaboroles Target P. Falciparum Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5FOC
DownloadVisualize
BU of 5foc by Molmil
Crystal structure of the P.falciparum cytosolic leucyl-tRNA synthetase editing domain (space group P21)
Descriptor: LEUCYL-TRNA SYNTHETASE
Authors:Palencia, A, Sonoiki, E, Guo, D, Ahyong, V, Dong, C, Li, X, Hernandez, V.S, Gut, J, Legac, J, Cooper, R, Alley, M.R.K, Freund, Y.R, DeRisi, J, Cusack, S, Rosenthal, P.J.
Deposit date:2015-11-19
Release date:2016-06-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Anti-Malarial Benzoxaboroles Target P. Falciparum Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5FOF
DownloadVisualize
BU of 5fof by Molmil
Crystal structure of the P.knowlesi cytosolic leucyl-tRNA synthetase editing domain
Descriptor: LEUCYL-TRNA SYNTHETASE
Authors:Palencia, A, Sonoiki, E, Guo, D, Ahyong, V, Dong, C, Li, X, Hernandez, V.S, Gut, J, Legac, J, Cooper, R, Alley, M.R.K, Freund, Y.R, DeRisi, J, Cusack, S, Rosenthal, P.J.
Deposit date:2015-11-19
Release date:2016-06-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Anti-Malarial Benzoxaboroles Target P. Falciparum Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5ZV7
DownloadVisualize
BU of 5zv7 by Molmil
P domain of GII.17-2014/15 complexed with B-trisaccharide
Descriptor: VP1, alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
Authors:Chen, Y, Li, X.
Deposit date:2018-05-09
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019

222415

건을2024-07-10부터공개중

PDB statisticsPDBj update infoContact PDBjnumon