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4MYW
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BU of 4myw by Molmil
Structure of HSV-2 gD bound to nectin-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein D, ...
Authors:Lu, G, Zhang, N, Qi, J, Li, Y, Chen, Z, Zheng, C, Yan, J, Gao, G.F.
Deposit date:2013-09-28
Release date:2014-10-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.189 Å)
Cite:Crystal structure of herpes simplex virus 2 gD bound to nectin-1 reveals a conserved mode of receptor recognition.
J.Virol., 88, 2014
4O2C
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BU of 4o2c by Molmil
An Nt-acetylated peptide complexed with HLA-B*3901
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-39 alpha chain, ...
Authors:Sun, M, Liu, J, Qi, J, Tefsen, B, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2013-12-17
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:N alpha-terminal acetylation for T cell recognition: molecular basis of MHC class I-restricted n alpha-acetylpeptide presentation
J.Immunol., 192, 2014
7W8S
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BU of 7w8s by Molmil
Structure of SARS-CoV-2 spike receptor-binding domain Y453F mutation complexed with American mink ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
Authors:Su, C, Qi, J.X, Gao, G.F.
Deposit date:2021-12-08
Release date:2022-08-17
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Molecular Basis of Mink ACE2 Binding to SARS-CoV-2 and Its Mink-Derived Variants.
J.Virol., 96, 2022
7WA3
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BU of 7wa3 by Molmil
Structure of American mink ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
Authors:Su, C, Qi, J.X, Gao, G.F.
Deposit date:2021-12-11
Release date:2022-08-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:The molecular basis of SARS-CoV-2 variants binding to mink ACE2
To Be Published
7WA1
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BU of 7wa1 by Molmil
Structure of SARS-CoV-2 spike receptor-binding domain F486L mutation complexed with American mink ACE2
Descriptor: Angiotensin-converting enzyme 2, Spike protein S1, ZINC ION
Authors:Su, C, Qi, J.X, Gao, G.F.
Deposit date:2021-12-11
Release date:2022-08-17
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular Basis of Mink ACE2 Binding to SARS-CoV-2 and Its Mink-Derived Variants.
J.Virol., 96, 2022
7XNF
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BU of 7xnf by Molmil
Structure of SARS-CoV-2 antibody P2C-1F11 with GX/P2V/2017 RBD
Descriptor: P2C-1F11 Heavy Chain, P2C-1F11 Lambda chain, Spike protein S1
Authors:Jia, Y.F, Chai, Y, Wang, Q.H, Gao, G.F.
Deposit date:2022-04-28
Release date:2023-01-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Cross-reaction of current available SARS-CoV-2 MAbs against the pangolin-origin coronavirus GX/P2V/2017.
Cell Rep, 41, 2022
7WVD
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BU of 7wvd by Molmil
Crystal structure of H14 complexed with SIA28
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of SIA28, ...
Authors:Chen, Y, Qi, J, Gao, G.F.
Deposit date:2022-02-10
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes.
Nat Commun, 13, 2022
7WVI
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BU of 7wvi by Molmil
Crystal structure of SIA28
Descriptor: Heavy chain of SIA28, Light chain of SIA28
Authors:Chen, Y, Qi, J, Gao, G.F.
Deposit date:2022-02-10
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes.
Nat Commun, 13, 2022
7WVG
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BU of 7wvg by Molmil
Crystal structure of H18 complexed with SIA28
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of SIA28, ...
Authors:Chen, Y, Qi, J, Gao, G.F.
Deposit date:2022-02-10
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes.
Nat Commun, 13, 2022
7XAD
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BU of 7xad by Molmil
Crystal strucutre of PD-L1 and DBL2_02 designed protein binder
Descriptor: DBL2_02 binder, Programmed cell death 1 ligand 1
Authors:Liu, K.F, Xu, Z.P, Han, P, Pacesa, M, Gao, G.F, Chai, Y, Tan, S.G.
Deposit date:2022-03-17
Release date:2023-04-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:De novo design of protein interactions with learned surface fingerprints.
Nature, 617, 2023
7WKJ
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BU of 7wkj by Molmil
A COVID-19 T-cell response detection method based on a newly identified human CD8+ T cell epitope from SARS-CoV-2-Hubei Province, 2021.
Descriptor: Beta-2-microglobulin, LYS-THR-PHE-PRO-PRO-THR-GLU-PRO-LYS, MHC class I antigen
Authors:Zhang, J, Lu, D, Li, M, Liu, M.S, Yao, S.J, Zhan, J.B, Liu, J, Gao, G.F.
Deposit date:2022-01-10
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A COVID-19 T-Cell Response Detection Method Based on a Newly Identified Human CD8 + T Cell Epitope from SARS-CoV-2 - Hubei Province, China, 2021.
China CDC Wkly, 4, 2022
7WVM
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BU of 7wvm by Molmil
The complex structure of PD-1 and cemiplimab
Descriptor: Heavy Chain of Cemiplimab, Light Chain of Cemiplimab, Programmed cell death protein 1
Authors:Lu, D, Xu, Z.P, Liu, K.F, Tan, S.G, Gao, G.F, Chai, Y.
Deposit date:2022-02-10
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:PD-1 N58-Glycosylation-Dependent Binding of Monoclonal Antibody Cemiplimab for Immune Checkpoint Therapy.
Front Immunol, 13, 2022
7XF3
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BU of 7xf3 by Molmil
The structure of HLA-B*1501/BM58-66AF9
Descriptor: 9-mer peptide from Matrix protein 1, Beta-2-microglobulin, MHC class I antigen
Authors:Zhao, Y.Z, Xiao, W.L, Wu, Y.N, Fan, W.F, Yue, C, Zhang, Q.X, Zhang, D.N, Yuan, X.J, Yao, S.J, Liu, S, Li, M, Wang, P.Y, Zhang, H.J, Zhang, J, Zhao, M, Zheng, X.Q, Liu, W.J, Gao, G.F, Liu, W.L.
Deposit date:2022-03-31
Release date:2023-02-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Parallel T Cell Immunogenic Regions in Influenza B and A Viruses with Distinct Nuclear Export Signal Functions: The Balance between Viral Life Cycle and Immune Escape.
J Immunol., 210, 2023
7WD1
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BU of 7wd1 by Molmil
Crystal structure of R14 bound to SARS-CoV-2 RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, R14, Spike protein S1, ...
Authors:Wang, Q.H, Gao, G.F, Qi, J.X, Su, C, Liu, H.H, Wu, L.L.
Deposit date:2021-12-20
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Two pan-SARS-CoV-2 nanobodies and their multivalent derivatives effectively prevent Omicron infections in mice.
Cell Rep Med, 4, 2023
7WD2
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BU of 7wd2 by Molmil
Crystal structure of S43 bound to SARS-CoV-2 RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, Q.H, Gao, G.F, Qi, J.X, Su, C, Liu, H.H, Wu, L.L.
Deposit date:2021-12-20
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Two pan-SARS-CoV-2 nanobodies and their multivalent derivatives effectively prevent Omicron infections in mice.
Cell Rep Med, 4, 2023
8HIT
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BU of 8hit by Molmil
Crystal structure of anti-CTLA-4 humanized IgG1 MAb--JS007 in complex with human CTLA-4
Descriptor: Cytotoxic T-lymphocyte protein 4, JS007-VH, JS007-VL
Authors:Tan, S, Shi, Y, Wang, Q, Gao, G.F, Guan, J, Chai, Y, Qi, J.
Deposit date:2022-11-21
Release date:2023-02-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Characterization of the high-affinity anti-CTLA-4 monoclonal antibody JS007 for immune checkpoint therapy of cancer.
Mabs, 15, 2023
8H5C
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BU of 8h5c by Molmil
Structure of SARS-CoV-2 Omicron BA.2.75 RBD in complex with human ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Z.N, Bai, B, Liu, K.F, Qi, J.X, Gao, G.F.
Deposit date:2022-10-12
Release date:2023-07-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for receptor binding and broader interspecies receptor recognition of currently circulating Omicron sub-variants.
Nat Commun, 14, 2023
8I5D
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BU of 8i5d by Molmil
Crystal structure of a TCR in complex with HLA-A*11:01 bound to KRAS peptide (VVGAVGVGK)
Descriptor: Beta-2-microglobulin, MHC class I antigen (Fragment), TCR alpha chain, ...
Authors:Lu, D, Chen, Y, Jiang, M, Tan, S.G, Chai, Y, Gao, G.F.
Deposit date:2023-01-25
Release date:2023-08-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of a TCR in complex with HLA-A*11:01 bound to KRAS peptide (VVGAVGVGK)
Nat Commun, 2023
8I5C
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BU of 8i5c by Molmil
Crystal structure of a TCR in complex with HLA-A*11:01 bound to KRAS peptide (VVGAVGVGK)
Descriptor: Beta-2-microglobulin, MHC class I antigen (Fragment), TCR alpha chain, ...
Authors:Lu, D, Chen, Y, Jiang, M, Tan, S.G, Chai, Y, Gao, G.F.
Deposit date:2023-01-24
Release date:2023-08-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Crystal structure of a TCR in complex with HLA-A*11:01 bound to KRAS peptide (VVGAVGVGK)
Nat Commun, 2023
8I5E
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BU of 8i5e by Molmil
Crystal structure of HLA-A*11:01 in complex with KRAS peptide (VVGAGGVGK)
Descriptor: Beta-2-microglobulin, KRAS-G12wt-9, MHC class I antigen (Fragment)
Authors:Lu, D, Chen, Y, Jiang, M, Tan, S.G, Chai, Y, Gao, G.F.
Deposit date:2023-01-25
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a TCR in complex with HLA-A*11:01 bound to KRAS peptide (VVGAVGVGK)
Nat Commun, 2023
7C4Z
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BU of 7c4z by Molmil
Cryo-EM structure of empty Coxsackievirus A10 at pH 5.5
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
Authors:Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J.
Deposit date:2020-05-18
Release date:2020-07-22
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1.
Proc.Natl.Acad.Sci.USA, 117, 2020
7C4Y
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BU of 7c4y by Molmil
Cryo-EM structure of empty Coxsackievirus A10 at pH 7.4
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
Authors:Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J.
Deposit date:2020-05-18
Release date:2020-07-22
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1.
Proc.Natl.Acad.Sci.USA, 117, 2020
7C8J
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BU of 7c8j by Molmil
Structural basis for cross-species recognition of COVID-19 virus spike receptor binding domain to bat ACE2
Descriptor: Angiotensin-converting enzyme, SARS-CoV-2 Receptor binding domain, ZINC ION
Authors:Liu, K.F, Wang, J, Tan, S.G, Niu, S, Wu, L.L, Zhang, Y.F, Pan, X.Q, Meng, Y.M, Chen, Q, Wang, Q.H, Wang, H.W, Qi, J.X, Gao, G.F.
Deposit date:2020-06-01
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Cross-species recognition of SARS-CoV-2 to bat ACE2.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CDZ
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BU of 7cdz by Molmil
Crystal structure of 2019-nCoV nucleocapsid N-terminal domain (NTD) protein
Descriptor: Nucleoprotein
Authors:Peng, Y, Song, H, Qi, J, Gao, G.F.
Deposit date:2020-06-21
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of the SARS-CoV-2 nucleocapsid and their perspectives for drug design.
Embo J., 39, 2020
7C8K
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BU of 7c8k by Molmil
Structural basis for cross-species recognition of COVID-19 virus spike receptor binding domain to bat ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
Authors:Liu, K.F, Wang, J, Tan, S.G, Niu, S, Wu, L.L, Zhang, Y.F, Pan, X.Q, Meng, Y.M, Chen, Q, Wang, Q.H, Wang, H.W, Qi, J.X, Gao, G.F.
Deposit date:2020-06-02
Release date:2021-01-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cross-species recognition of SARS-CoV-2 to bat ACE2.
Proc.Natl.Acad.Sci.USA, 118, 2021

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