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1IUP
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BU of 1iup by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with isobutyrates
Descriptor: 2-METHYL-PROPIONIC ACID, meta-Cleavage product hydrolase
Authors:Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
Deposit date:2002-03-06
Release date:2002-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
6GK9
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BU of 6gk9 by Molmil
Inhibited structure of IMPDH from Pseudomonas aeruginosa
Descriptor: (5~{S})-7-azanyl-5-(4-chlorophenyl)-2,4-bis(oxidanylidene)-1,5-dihydropyrano[2,3-d]pyrimidine-6-carbonitrile, Inosine-5'-monophosphate dehydrogenase, SULFATE ION
Authors:Labesse, G, Alexandre, T, Haouz, A, Munier-Lehmann, H.
Deposit date:2018-05-18
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:First-in-class allosteric inhibitors of bacterial IMPDHs.
Eur J Med Chem, 167, 2019
2CY5
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BU of 2cy5 by Molmil
Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-2 crystal)
Descriptor: CALCIUM ION, epidermal growth factor receptor pathway substrate 8-like protein 1
Authors:Mizohata, E, Hamana, H, Morita, S, Kinoshita, Y, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-04
Release date:2006-01-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-2 crystal)
To be Published
6RBE
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BU of 6rbe by Molmil
State 2 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Shayan, R, Mitterer, V, Ferreira-Cerca, S, Murat, G, Enne, T, Rinaldi, D, Weigl, S, Omanic, H, Gleizes, P.E, Kressler, D, Pertschy, B, Plisson-Chastang, C.
Deposit date:2019-04-10
Release date:2019-06-26
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Conformational proofreading of distant 40S ribosomal subunit maturation events by a long-range communication mechanism.
Nat Commun, 10, 2019
6I2Z
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BU of 6i2z by Molmil
Isolated globin domain of the Bordetella pertussis globin-coupled sensor
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Uncharacterized protein
Authors:Germani, F, De Schutter, A, Cuypers, B, Berghmans, H, Van Hauwaert, M.-L, Bruno, S, Mozzarelli, A, Moens, L, Van Doorslaer, S, Bolognesi, M, Pesce, A, Dewilde, S.
Deposit date:2018-11-02
Release date:2019-10-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and Functional Characterization of the Globin-Coupled Sensors ofAzotobacter vinelandiiandBordetella pertussis.
Antioxid.Redox Signal., 32, 2020
3PZ2
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BU of 3pz2 by Molmil
Crystal structure of RabGGTase(DELTA LRR; DELTA IG) in Complex with BMS3 and lipid substrate GGPP
Descriptor: (3R)-3-benzyl-4-[(4-methoxyphenyl)sulfonyl]-1-[(1-methyl-1H-imidazol-5-yl)methyl]-2,3,4,5-tetrahydro-1H-1,4-benzodiazepine-7-carbonitrile, CALCIUM ION, GERANYLGERANYL DIPHOSPHATE, ...
Authors:Guo, Z, Bon, R.S, Stigter, E.A, Waldmann, H, Alexandrov, K, Blankenfeldt, W, Goody, R.S.
Deposit date:2010-12-14
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure-Guided Development of Selective RabGGTase Inhibitors.
Angew.Chem.Int.Ed.Engl., 50, 2011
3Q5D
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BU of 3q5d by Molmil
crystal structure of human Atlastin-1 (residues 1-447) bound to GDP, crystal form 1
Descriptor: Atlastin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Byrnes, L.J, Sondermann, H.
Deposit date:2010-12-28
Release date:2011-01-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structural basis for the nucleotide-dependent dimerization of the large G protein atlastin-1/SPG3A.
Proc.Natl.Acad.Sci.USA, 108, 2011
3SVN
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BU of 3svn by Molmil
Crystal structure of mKate S158A mutant at pH 7.5
Descriptor: mKate
Authors:Wang, Q, Byrnes, L, Sondermann, H.
Deposit date:2011-07-12
Release date:2011-09-14
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVU
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BU of 3svu by Molmil
Crystal structure of mKate mutant S143C
Descriptor: mkate S143C
Authors:Wang, Q, Byrnes, L, Sondermann, H.
Deposit date:2011-07-12
Release date:2011-09-14
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVO
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BU of 3svo by Molmil
Crystal structure of mKate mutant S158A/S143C at pH 10.0
Descriptor: mKate S158A/S143C
Authors:Wang, Q, Byrnes, L, Sondermann, H.
Deposit date:2011-07-12
Release date:2011-09-14
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
6S9A
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BU of 6s9a by Molmil
Artificial GTPase-BSE dimer of human Dynamin1
Descriptor: CHLORIDE ION, Dynamin-1,Dynamin-1, ZINC ION
Authors:Ganichkin, O.M, Vancraenenbroeck, R, Rosenblum, G, Hofmann, H, Daumke, O, Noel, J.K.
Deposit date:2019-07-11
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Quantification and demonstration of the collective constriction-by-ratchet mechanism in the dynamin molecular motor.
Proc.Natl.Acad.Sci.USA, 118, 2021
6GJV
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BU of 6gjv by Molmil
apo-structure of IMPDH from Pseudomonas aeruginosa
Descriptor: Inosine-5'-monophosphate dehydrogenase
Authors:Labesse, G, Haouz, A, Alexandre, T, Munier-Lehmann, H.
Deposit date:2018-05-17
Release date:2019-02-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:First-in-class allosteric inhibitors of bacterial IMPDHs.
Eur J Med Chem, 167, 2019
3RWA
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BU of 3rwa by Molmil
Crystal structure of circular-permutated mKate
Descriptor: Fluorescent protein FP480
Authors:Wang, Q, Byrnes, L, Sondermann, H.
Deposit date:2011-05-08
Release date:2011-06-15
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Circular permutation of red fluorescent proteins.
Plos One, 6, 2011
3RWT
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BU of 3rwt by Molmil
Crystal structure of circular permutated Red Fluorescent Protein mKate(cp 154-153)
Descriptor: Fluorescent protein FP480,Fluorescent protein FP480, MAGNESIUM ION
Authors:Wang, Q, Sondermann, H.
Deposit date:2011-05-09
Release date:2011-06-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Circular permutation of red fluorescent proteins.
Plos One, 6, 2011
1GK7
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BU of 1gk7 by Molmil
HUMAN VIMENTIN COIL 1A FRAGMENT (1A)
Descriptor: SULFATE ION, VIMENTIN
Authors:Strelkov, S.V, Herrmann, H, Geisler, N, Zimbelmann, R, Aebi, U, Burkhard, P.
Deposit date:2001-08-08
Release date:2002-03-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Conserved Segments 1A and 2B of the Intermediate Filament Dimer: Their Atomic Structures and Role in Filament Assembly.
Embo J., 21, 2002
6RBD
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BU of 6rbd by Molmil
State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles
Descriptor: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Shayan, R, Mitterer, V, Ferreira-Cerca, S, Murat, G, Enne, T, Rinaldi, D, Weigl, S, Omanic, H, Gleizes, P.E, Kressler, D, Pertschy, B, Plisson-Chastang, C.
Deposit date:2019-04-10
Release date:2019-06-26
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Conformational proofreading of distant 40S ribosomal subunit maturation events by a long-range communication mechanism.
Nat Commun, 10, 2019
2CDN
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BU of 2cdn by Molmil
Crystal structure of Mycobacterium tuberculosis adenylate kinase complexed with two molecules of ADP and Mg
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENYLATE KINASE, MAGNESIUM ION
Authors:Bellinzoni, M, Haouz, A, Grana, M, Munier-Lehmann, H, Alzari, P.M.
Deposit date:2006-01-25
Release date:2006-05-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal Structure of Mycobacterium Tuberculosis Adenylate Kinase in Complex with Two Molecules of Adp and Mg2+ Supports an Associative Mechanism for Phosphoryl Transfer.
Protein Sci., 15, 2006
3SVS
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BU of 3svs by Molmil
Crystal structure of mkate mutant S158A/S143C at pH 4.0
Descriptor: mKate S158A/S143C
Authors:Wang, Q, Bynres, L, Sondermann, H.
Deposit date:2011-07-12
Release date:2011-09-14
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVR
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BU of 3svr by Molmil
Crystal structure of mkate mutant S158A/S143C at pH 7.5
Descriptor: mkate S158A/S143C
Authors:Wang, Q, Byrnes, L, Sondermann, H.
Deposit date:2011-07-12
Release date:2011-09-14
Method:X-RAY DIFFRACTION (1.907 Å)
Cite:Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
2FEO
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BU of 2feo by Molmil
Mutant R188M of The Cytidine Monophosphate Kinase from E. coli complexed with dCMP
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase, SULFATE ION
Authors:Ofiteru, A, Bucurenci, N, Alexov, E, Bertrand, T, Briozzo, P, Munier-Lehmann, H, Tourneux, L, Barzu, O, Gilles, A.M.
Deposit date:2005-12-16
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase.
Febs J., 274, 2007
2FEM
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BU of 2fem by Molmil
Mutant R188M of the Cytidine Monophosphate Kinase From E. Coli
Descriptor: Cytidylate kinase
Authors:Ofiteru, A, Bucurenci, N, Alexov, E, Bertrand, T, Briozzo, P, Munier-Lehmann, H, Tourneux, L, Barzu, O, Gilles, A.M.
Deposit date:2005-12-16
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase.
Febs J., 274, 2007
6GTH
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BU of 6gth by Molmil
Serial Femtosecond Crystallography at Megahertz pulse rates
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase
Authors:Wiedorn, M, Oberthuer, D, Werner, N, Schubert, R, White, T.A, Mancuso, A, Perbandt, M, Betzel, C, Barty, A, Chapman, H.
Deposit date:2018-06-18
Release date:2018-10-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Megahertz serial crystallography.
Nat Commun, 9, 2018
2CY4
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BU of 2cy4 by Molmil
Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)
Descriptor: CALCIUM ION, epidermal growth factor receptor pathway substrate 8-like protein 1
Authors:Mizohata, E, Hamana, H, Morita, S, Kinoshita, Y, Nagano, K, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-04
Release date:2006-01-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)
To be Published
3DC0
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BU of 3dc0 by Molmil
Crystal structure of native alpha-amylase from Bacillus sp. KR-8104
Descriptor: CALCIUM ION, alpha-amylase
Authors:Alikhajeh, J, Khajeh, K, Ranjbar, B, Naderi-Manesh, M, Naderi-Manesh, H, Chen, C.J.
Deposit date:2008-06-03
Release date:2008-06-17
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal structure of native alpha-amylase from Bacillus sp. KR-8104.
to be published
4GTT
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BU of 4gtt by Molmil
Engineered RabGGTase in complex with BMS analogue 12
Descriptor: 4-({(3R)-7-cyano-4-[(4-methoxyphenyl)sulfonyl]-1-[(1-methyl-1H-imidazol-5-yl)methyl]-2,3,4,5-tetrahydro-1H-1,4-benzodiazepin-3-yl}methyl)phenyl benzylcarbamate, CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, ...
Authors:Guo, Z, Stigter, E.A, Bon, R.S, Waldmann, H, Blankenfeldt, W, Goody, R.S.
Deposit date:2012-08-29
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Development of Selective, Potent RabGGTase Inhibitors
J.Med.Chem., 55, 2012

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