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8JOZ
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BU of 8joz by Molmil
Crystal structure of CmoM from E. coli complexed with sinefungin and cellularly expressed tRNA Ser
分子名称: MAGNESIUM ION, SINEFUNGIN, tRNA 5-carboxymethoxyuridine methyltransferase, ...
著者Yoo, J, Kim, J.
登録日2023-06-09
公開日2023-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structural basis for the selective methylation of 5-carboxymethoxyuridine in tRNA modification.
Nucleic Acids Res., 51, 2023
6DT0
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BU of 6dt0 by Molmil
Cryo-EM structure of a mitochondrial calcium uniporter
分子名称: CALCIUM ION, Mitochondrial calcium uniporter
著者Yoo, J, Wu, M, Yin, Y, Herzik, M.A.J, Lander, G.C, Lee, S.-Y.
登録日2018-06-14
公開日2018-07-11
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of a mitochondrial calcium uniporter.
Science, 361, 2018
6BW5
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BU of 6bw5 by Molmil
Human GPT (DPAGT1) in complex with tunicamycin
分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Tunicamycin, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
著者Yoo, J, Kuk, A.C.Y, Mashalidis, E.H, Lee, S.-Y.
登録日2017-12-14
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献GlcNAc-1-P-transferase-tunicamycin complex structure reveals basis for inhibition of N-glycosylation.
Nat. Struct. Mol. Biol., 25, 2018
6BW6
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BU of 6bw6 by Molmil
Human GPT (DPAGT1) H129 variant in complex with tunicamycin
分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Tunicamycin, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
著者Yoo, J, Kuk, A.C.Y, Mashalidis, E.H, Lee, S.-Y.
登録日2017-12-14
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献GlcNAc-1-P-transferase-tunicamycin complex structure reveals basis for inhibition of N-glycosylation.
Nat. Struct. Mol. Biol., 25, 2018
8TWR
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BU of 8twr by Molmil
Influenza A virus (A/Aichi/2/1968(H3N2) nucleoprotein mutant - 2-7 deleted, P283S, R416A
分子名称: Nucleoprotein, SODIUM ION
著者Yoon, J, Zhang, Y.M, Grant, R.A, Shoulders, M.D.
登録日2023-08-21
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure.
Sci Adv, 10, 2024
8TWP
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BU of 8twp by Molmil
Influenza A virus (A/Aichi/2/1968(H3N2) nucleoprotein mutant - 2-7 deleted, R416A
分子名称: Nucleoprotein
著者Yoon, J, Zhang, Y.M, Grant, R.A, Shoulders, M.D.
登録日2023-08-21
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure.
Sci Adv, 10, 2024
3MVC
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BU of 3mvc by Molmil
High resolution crystal structure of the heme domain of GLB-6 from C. elegans
分子名称: Globin protein 6, NITRATE ION, PRASEODYMIUM ION, ...
著者Yoon, J, Herzik Jr, M.A, Winter, M.B, Tran, R, Olea Jr, C, Marletta, M.A.
登録日2010-05-03
公開日2010-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Structure and properties of a bis-histidyl ligated globin from Caenorhabditis elegans.
Biochemistry, 49, 2010
5XBK
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BU of 5xbk by Molmil
Crystal structure of human Importin4
分子名称: Importin-4, histone H3
著者Song, J.J, Yoon, J.
登録日2017-03-20
公開日2018-02-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.223 Å)
主引用文献Integrative Structural Investigation on the Architecture of Human Importin4_Histone H3/H4_Asf1a Complex and Its Histone H3 Tail Binding
J. Mol. Biol., 430, 2018
5XAH
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BU of 5xah by Molmil
Crystal structure of human Importin4
分子名称: Importin-4
著者Song, J.J, Yoon, J.
登録日2017-03-13
公開日2018-02-14
最終更新日2018-04-11
実験手法X-RAY DIFFRACTION (3.004 Å)
主引用文献Integrative Structural Investigation on the Architecture of Human Importin4_Histone H3/H4_Asf1a Complex and Its Histone H3 Tail Binding
J. Mol. Biol., 430, 2018
4ZG0
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BU of 4zg0 by Molmil
Crystal structure of Mouse Syndesmos protein
分子名称: Protein syndesmos
著者Lee, I, Kim, H, Yoo, J, Cho, H, Lee, W.
登録日2015-04-22
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Crystal structure of syndesmos and its interaction with Syndecan-4 proteoglycan
Biochem.Biophys.Res.Commun., 463, 2015
7EKR
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BU of 7ekr by Molmil
The crystal structure of Orange carotenoid binding protein 1 (OCP1)
分子名称: Orange carotenoid protein, beta,beta-carotene-4,4'-dione
著者Song, J.J, Yoon, J.
登録日2021-04-06
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Color-Tuning Mechanism of the Lit Form of Orange Carotenoid Protein.
Mol.Cells, 46, 2023
5VE8
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BU of 5ve8 by Molmil
Crystal structure of full-length Kluyveromyces lactis Kap123 with histone H3 1-28
分子名称: Histone H3, Kap123
著者An, S, Yoon, J, Song, J.-J, Cho, U.-S.
登録日2017-04-04
公開日2017-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-based nuclear import mechanism of histones H3 and H4 mediated by Kap123.
Elife, 6, 2017
5W0V
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BU of 5w0v by Molmil
Crystal structure of full-length Kluyveromyces lactis Kap123 with histone H4 1-34
分子名称: Histone H4 1-34, Kap123
著者An, S, Yoon, J, Song, J.-J, Cho, U.-S.
登録日2017-05-31
公開日2017-11-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.821 Å)
主引用文献Structure-based nuclear import mechanism of histones H3 and H4 mediated by Kap123.
Elife, 6, 2017
5VCH
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BU of 5vch by Molmil
Crystal structure of full-length Kluyveromyces lactis Kap123
分子名称: Kap123
著者An, S, Yoon, J, Song, J.-J, Cho, U.-S.
登録日2017-03-31
公開日2017-11-01
最終更新日2022-03-16
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure-based nuclear import mechanism of histones H3 and H4 mediated by Kap123.
Elife, 6, 2017
2XHS
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BU of 2xhs by Molmil
Crystal structure of the ligand binding domain of Fushi tarazu factor 1 of Drosophila melanogaster.
分子名称: NUCLEAR HORMONE RECEPTOR FTZ-F1, SEGMENTATION PROTEIN FUSHI TARAZU
著者Yoo, J.H, Cho, H.S.
登録日2010-06-21
公開日2011-07-20
最終更新日2018-06-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Fushi Tarazu Factor 1 Ligand Binding Domain/Fushi Tarazu Peptide Complex Identifies New Class of Nuclear Receptors.
J.Biol.Chem., 286, 2011
4UV7
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BU of 4uv7 by Molmil
The complex structure of extracellular domain of EGFR and GC1118A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, EPIDERMAL GROWTH FACTOR RECEPTOR, ...
著者Yoo, J.H, Cho, H.S.
登録日2014-08-05
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Gc1118, an Anti-Egfr Antibody with a Distinct Binding Epitope and Superior Inhibitory Activity Against High-Affinity Egfr Ligands.
Mol.Cancer Ther., 15, 2016
4XZZ
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BU of 4xzz by Molmil
Structure of Helicobacter pylori Csd6 in the ligand-free state
分子名称: Conserved hypothetical secreted protein, GLYCEROL
著者Kim, H.S, Im, H.N, Yoon, H.J, Suh, S.W.
登録日2015-02-05
公開日2015-09-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献The Cell Shape-determining Csd6 Protein from Helicobacter pylori Constitutes a New Family of l,d-Carboxypeptidase
J.Biol.Chem., 290, 2015
4Y4V
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BU of 4y4v by Molmil
Structure of Helicobacter pylori Csd6 in the D-Ala-bound state
分子名称: Conserved hypothetical secreted protein, D-ALANINE, GLYCEROL
著者Kim, H.S, Im, H.N, Yoon, H.J, Suh, S.W.
登録日2015-02-11
公開日2015-09-02
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献The Cell Shape-determining Csd6 Protein from Helicobacter pylori Constitutes a New Family of l,d-Carboxypeptidase
J.Biol.Chem., 290, 2015
4BFM
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BU of 4bfm by Molmil
The crystal structure of mouse PK38
分子名称: MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION
著者Yoo, J.H, Cho, Y.S, Park, S.M, Cho, H.S.
登録日2013-03-21
公開日2014-02-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The Structures of the Kinase Domain and Uba Domain of Mpk38 Suggest the Activation Mechanism for Kinase Activity.
Acta Crystallogr.,Sect.D, 70, 2014
2RL2
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BU of 2rl2 by Molmil
Crystal structure of UDP-N-acetylglucosamine enolpyruvyl transferase from Haemophilus influenzae in complex with UDP-N-acetylglucosamine and fosfomycin
分子名称: SULFATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE, ...
著者Yoon, H.J, Suh, S.W.
登録日2007-10-18
公開日2008-03-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of UDP-N-acetylglucosamine enolpyruvyl transferase from Haemophilus influenzae in complex with UDP-N-acetylglucosamine and fosfomycin
Proteins, 71, 2008
2RL1
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BU of 2rl1 by Molmil
Crystal structure of UDP-N-acetylglucosamine enolpyruvyl transferase from Haemophilus influenzae in complex with UDP-N-acetylglucosamine
分子名称: SULFATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Yoon, H.J, Suh, S.W.
登録日2007-10-18
公開日2008-03-25
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of UDP-N-acetylglucosamine enolpyruvyl transferase from Haemophilus influenzae in complex with UDP-N-acetylglucosamine and fosfomycin
Proteins, 71, 2008
7TX7
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BU of 7tx7 by Molmil
Cryo-EM structure of the human reduced folate carrier
分子名称: Digitonin, Reduced folate transporter,Soluble cytochrome b562
著者Wright, N.J, Fedor, J.G, Lee, S.-Y.
登録日2022-02-07
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Methotrexate recognition by the human reduced folate carrier SLC19A1.
Nature, 609, 2022
7TX6
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BU of 7tx6 by Molmil
Cryo-EM structure of the human reduced folate carrier in complex with methotrexate
分子名称: Digitonin, METHOTREXATE, Reduced folate transporter,Soluble cytochrome b562
著者Wright, N.J, Fedor, J.G, Lee, S.-Y.
登録日2022-02-07
公開日2022-09-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Methotrexate recognition by the human reduced folate carrier SLC19A1.
Nature, 609, 2022
8DEP
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BU of 8dep by Molmil
Cryo-EM structure of the human reduced folate carrier, apo condition
分子名称: Digitonin, Reduced folate transporter,Soluble cytochrome b562
著者Wright, N.J, Fedor, J.G, Lee, S.-Y.
登録日2022-06-21
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Methotrexate recognition by the human reduced folate carrier SLC19A1.
Nature, 609, 2022
5G1D
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BU of 5g1d by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
分子名称: SYNDECAN-4, SYNTENIN-1
著者Lee, I, Kim, H, Yun, J.H, Lee, W.
登録日2016-03-25
公開日2016-11-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016

 

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