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3C9C
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BU of 3c9c by Molmil
Structural Basis of Histone H4 Recognition by p55
分子名称: CADMIUM ION, Chromatin assembly factor 1 p55 subunit, Histone H4, ...
著者Song, J.J, Garlick, J.D, Kingston, R.E.
登録日2008-02-15
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008
3EMH
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BU of 3emh by Molmil
Structural basis of WDR5-MLL interaction
分子名称: Mixed-lineage leukemia protein 1, SULFATE ION, WD repeat-containing protein 5
著者Song, J.J, Kingston, R.E.
登録日2008-09-24
公開日2008-10-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献WDR5 Interacts with Mixed Lineage Leukemia (MLL) Protein via the Histone H3-binding Pocket.
J.Biol.Chem., 283, 2008
3C99
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BU of 3c99 by Molmil
Structural Basis of Histone H4 Recognition by p55
分子名称: CADMIUM ION, Chromatin assembly factor 1 p55 subunit
著者Song, J.J, Garlick, J.D, Kingston, R.E.
登録日2008-02-15
公開日2008-05-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008
1R6Z
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BU of 1r6z by Molmil
The Crystal Structure of the Argonaute2 PAZ domain (as a MBP fusion)
分子名称: Chimera of Maltose-binding periplasmic protein and Argonaute 2, NICKEL (II) ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Song, J.J, Liu, J, Tolia, N.H, Schneiderman, J, Smith, S.K, Martienssen, R.A, Hannon, G.J, Joshua-Tor, L.
登録日2003-10-17
公開日2004-01-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes.
Nat.Struct.Biol., 10, 2003
1U04
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BU of 1u04 by Molmil
Crystal structure of full length Argonaute from Pyrococcus furiosus
分子名称: hypothetical protein PF0537
著者Song, J.J, Smith, S.K, Hannon, G.J, Joshua-Tor, L.
登録日2004-07-12
公開日2004-08-17
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Argonaute and Its Implications for RISC Slicer Activity
Science, 305, 2004
5XBK
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BU of 5xbk by Molmil
Crystal structure of human Importin4
分子名称: Importin-4, histone H3
著者Song, J.J, Yoon, J.
登録日2017-03-20
公開日2018-02-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.223 Å)
主引用文献Integrative Structural Investigation on the Architecture of Human Importin4_Histone H3/H4_Asf1a Complex and Its Histone H3 Tail Binding
J. Mol. Biol., 430, 2018
5XAH
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BU of 5xah by Molmil
Crystal structure of human Importin4
分子名称: Importin-4
著者Song, J.J, Yoon, J.
登録日2017-03-13
公開日2018-02-14
最終更新日2018-04-11
実験手法X-RAY DIFFRACTION (3.004 Å)
主引用文献Integrative Structural Investigation on the Architecture of Human Importin4_Histone H3/H4_Asf1a Complex and Its Histone H3 Tail Binding
J. Mol. Biol., 430, 2018
7EKR
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BU of 7ekr by Molmil
The crystal structure of Orange carotenoid binding protein 1 (OCP1)
分子名称: Orange carotenoid protein, beta,beta-carotene-4,4'-dione
著者Song, J.J, Yoon, J.
登録日2021-04-06
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Color-Tuning Mechanism of the Lit Form of Orange Carotenoid Protein.
Mol.Cells, 46, 2023
6JRP
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BU of 6jrp by Molmil
Crystal structure of CIC-HMG-ETV5-DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*AP*AP*TP*GP*AP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*CP*AP*TP*TP*CP*AP*T)-3'), Protein capicua homolog
著者Song, J.J, Lee, H.
登録日2019-04-05
公開日2019-07-31
最終更新日2020-01-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The crystal structure of Capicua HMG-box domain complexed with the ETV5-DNA and its implications for Capicua-mediated cancers.
Febs J., 286, 2019
1G4B
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BU of 1g4b by Molmil
CRYSTAL STRUCTURES OF THE HSLVU PEPTIDASE-ATPASE COMPLEX REVEAL AN ATP-DEPENDENT PROTEOLYSIS MECHANISM
分子名称: ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU, ATP-DEPENDENT PROTEASE HSLV
著者Wang, J, Song, J.J, Franklin, M.C, Kamtekar, S, Im, Y.J, Rho, S.H, Seong, I.S, Lee, C.S, Chung, C.H, Eom, S.H.
登録日2000-10-26
公開日2001-02-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (7 Å)
主引用文献Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism.
Structure, 9, 2001
1G4A
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BU of 1g4a by Molmil
CRYSTAL STRUCTURES OF THE HSLVU PEPTIDASE-ATPASE COMPLEX REVEAL AN ATP-DEPENDENT PROTEOLYSIS MECHANISM
分子名称: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU, ATP-DEPENDENT PROTEASE HSLV
著者Wang, J, Song, J.J, Franklin, M.C, Kamtekar, S, Im, Y.J, Rho, S.H, Seong, I.S, Lee, C.S, Chung, C.H, Eom, S.H.
登録日2000-10-26
公開日2001-02-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism.
Structure, 9, 2001
1HT1
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BU of 1ht1 by Molmil
Nucleotide-Dependent Conformational Changes in a Protease-Associated ATPase HslU
分子名称: ADENOSINE-5'-DIPHOSPHATE, HEAT SHOCK LOCUS HSLU, HEAT SHOCK LOCUS HSLV
著者Wang, J, Song, J.J, Seong, I.S, Franklin, M.C, Kamtekar, S, Eom, S.H, Chung, C.H.
登録日2000-12-27
公開日2001-11-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Nucleotide-dependent conformational changes in a protease-associated ATPase HsIU.
Structure, 9, 2001
1HT2
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BU of 1ht2 by Molmil
Nucleotide-Dependent Conformational Changes in a Protease-Associated ATPase HslU
分子名称: ADENOSINE-5'-DIPHOSPHATE, HEAT SHOCK LOCUS HSLU, HEAT SHOCK LOCUS HSLV
著者Wang, J, Song, J.J, Seong, I.S, Franklin, M.C, Kamtekar, S, Eom, S.H, Chung, C.H.
登録日2000-12-27
公開日2001-11-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Nucleotide-dependent conformational changes in a protease-associated ATPase HsIU.
Structure, 9, 2001
1HQY
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BU of 1hqy by Molmil
Nucleotide-Dependent Conformational Changes in a Protease-Associated ATPase HslU
分子名称: ADENOSINE-5'-DIPHOSPHATE, HEAT SHOCK LOCUS HSLU, HEAT SHOCK LOCUS HSLV
著者Wang, J, Song, J.J, Seong, I.S, Franklin, M.C, Kamtekar, S, Eom, S.H, Chung, C.H.
登録日2000-12-20
公開日2001-11-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Nucleotide-dependent conformational changes in a protease-associated ATPase HsIU.
Structure, 9, 2001
8GN5
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BU of 8gn5 by Molmil
Designed pH-responsive P22 VLP
分子名称: Major capsid protein
著者Kim, K.J, Kim, G, Bae, J.H, Song, J.J, Kim, H.S.
登録日2022-08-23
公開日2024-01-31
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (4.02 Å)
主引用文献A pH-Responsive Virus-Like Particle as a Protein Cage for a Targeted Delivery.
Adv Healthc Mater, 13, 2024
8I4O
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BU of 8i4o by Molmil
Design of a split green fluorescent protein for sensing and tracking an beta-amyloid
分子名称: Beta-amyloid, Split Green flourescent protein
著者Taegeun, Y, Jinsu, L, Jungmin, Y, Jungmin, C, Wondo, H, Song, J.J, Haksung, K.
登録日2023-01-20
公開日2023-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Engineering of a Fluorescent Protein for a Sensing of an Intrinsically Disordered Protein through Transition in the Chromophore State.
Jacs Au, 3, 2023
6AHC
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BU of 6ahc by Molmil
Cryo-EM structure of aldehyde-alcohol dehydrogenase reveals a high-order helical architecture critical for its activity
分子名称: Aldehyde-alcohol dehydrogenase
著者Kim, G, Song, J.J.
登録日2018-08-17
公開日2019-08-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Aldehyde-alcohol dehydrogenase forms a high-order spirosome architecture critical for its activity.
Nat Commun, 10, 2019
1Z26
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BU of 1z26 by Molmil
Structure of Pyrococcus furiosus Argonaute with bound tungstate
分子名称: Argonaute, TUNGSTATE(VI)ION
著者Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
登録日2005-03-07
公開日2005-04-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005
1Z25
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BU of 1z25 by Molmil
Structure of P.furiosus Argonaute with bound Mn2+
分子名称: Argonaute, MANGANESE (II) ION
著者Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
登録日2005-03-07
公開日2005-04-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005
7BVP
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BU of 7bvp by Molmil
AdhE spirosome in extended conformation
分子名称: Aldehyde-alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Kim, G.J, Song, J.J.
登録日2020-04-11
公開日2020-06-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Aldehyde-alcohol dehydrogenase undergoes structural transition to form extended spirosomes for substrate channeling.
Commun Biol, 3, 2020
6JPU
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BU of 6jpu by Molmil
CryoEM structure of Abo1 hexamer - apo complex
分子名称: Uncharacterized AAA domain-containing protein C31G5.19
著者Cho, C, Jang, J, Song, J.J.
登録日2019-03-28
公開日2019-12-25
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019
6JM9
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cryo-EM structure of DOT1L bound to unmodified nucleosome
分子名称: DNA strand I, DNA strand J, Histone H2A, ...
著者Jang, S, Song, J.J.
登録日2019-03-07
公開日2019-05-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Structural basis of recognition and destabilization of the histone H2B ubiquitinated nucleosome by the DOT1L histone H3 Lys79 methyltransferase.
Genes Dev., 33, 2019
6JQ0
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CryoEM structure of Abo1 Walker B (E372Q) mutant hexamer - ATP complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Uncharacterized AAA domain-containing protein C31G5.19, ...
著者Cho, C, Jang, J, Song, J.J.
登録日2019-03-28
公開日2019-12-25
最終更新日2020-01-01
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019
6JMA
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BU of 6jma by Molmil
cryo-EM structure of DOT1L bound to H2B ubiquitinated nucleosome
分子名称: DNA I&J, Histone H2A, Histone H2B 1.1, ...
著者Jang, S, Song, J.J.
登録日2019-03-07
公開日2019-05-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Structural basis of recognition and destabilization of the histone H2B ubiquitinated nucleosome by the DOT1L histone H3 Lys79 methyltransferase.
Genes Dev., 33, 2019
6JPQ
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CryoEM structure of Abo1 hexamer - ADP complex
分子名称: Uncharacterized AAA domain-containing protein C31G5.19
著者Cho, C, Jang, J, Song, J.J.
登録日2019-03-27
公開日2020-08-19
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.44 Å)
主引用文献Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019

 

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