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7VSG
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BU of 7vsg by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase reconstituted in the Nanodisc in PtdSer-occluded E2-Pi state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, O-[(S)-({(2R)-2,3-bis[(9Z)-octadec-9-enoyloxy]propyl}oxy)(hydroxy)phosphoryl]-L-serine, ...
著者Nakanishii, H, Abe, K.
登録日2021-10-26
公開日2021-12-29
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM of the ATP11C flippase reconstituted in Nanodiscs shows a distended phospholipid bilayer inner membrane around transmembrane helix 2.
J.Biol.Chem., 298, 2022
7VSH
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BU of 7vsh by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase reconstituted in the Nanodisc in E1P state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, MAGNESIUM ION, ...
著者Nakanishii, H, Abe, K.
登録日2021-10-26
公開日2021-12-29
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM of the ATP11C flippase reconstituted in Nanodiscs shows a distended phospholipid bilayer inner membrane around transmembrane helix 2.
J.Biol.Chem., 298, 2022
7BSS
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BU of 7bss by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase in E1AlF state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ATP11C, CDC50A, ...
著者Abe, K, Nishizawa, T, Nakanishi, H.
登録日2020-03-31
公開日2020-09-30
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Transport Cycle of Plasma Membrane Flippase ATP11C by Cryo-EM.
Cell Rep, 32, 2020
7BSP
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BU of 7bsp by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase in E1-AMPPCP state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ATP11C, ...
著者Abe, K, Nishizawa, T, Nakanishi, H.
登録日2020-03-31
公開日2020-09-30
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Transport Cycle of Plasma Membrane Flippase ATP11C by Cryo-EM.
Cell Rep, 32, 2020
7BSV
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BU of 7bsv by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase in PtdSer-occluded E2-AlF state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ATP11C, CDC50A, ...
著者Abe, K, Nishizawa, T, Nakanishi, H.
登録日2020-03-31
公開日2020-09-30
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Transport Cycle of Plasma Membrane Flippase ATP11C by Cryo-EM.
Cell Rep, 32, 2020
7BSW
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BU of 7bsw by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase in PtdEtn-occluded E2-AlF state
分子名称: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ATP11C, ...
著者Abe, K, Nishizawa, T, Nakanishi, H.
登録日2020-03-31
公開日2020-09-30
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Transport Cycle of Plasma Membrane Flippase ATP11C by Cryo-EM.
Cell Rep, 32, 2020
7BSQ
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BU of 7bsq by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase in E1AlF-ADP state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ATP11C, ...
著者Abe, K, Nishizawa, T, Nakanishi, H.
登録日2020-03-31
公開日2020-09-30
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Transport Cycle of Plasma Membrane Flippase ATP11C by Cryo-EM.
Cell Rep, 32, 2020
7BSU
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BU of 7bsu by Molmil
Cryo-EM structure of a human ATP11C-CDC50A flippase in PtdSer-bound E2BeF state
分子名称: 1-deoxy-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ATP11C, ...
著者Abe, K, Nishizawa, T, Nakanishi, H.
登録日2020-03-31
公開日2020-09-30
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Transport Cycle of Plasma Membrane Flippase ATP11C by Cryo-EM.
Cell Rep, 32, 2020
6LKN
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BU of 6lkn by Molmil
Crystal structure of ATP11C-CDC50A in PtdSer-bound E2P state
分子名称: 1-deoxy-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, ...
著者Abe, K, Irie, K, Nakanishi, H, Hasegawa, K.
登録日2019-12-19
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Crystal structure of a human plasma membrane phospholipid flippase.
J.Biol.Chem., 295, 2020
7X22
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BU of 7x22 by Molmil
Cryo-EM structure of non gastric H,K-ATPase alpha2 K794S in (2K+)E2-AlF state
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Nakanishi, H, Abe, K.
登録日2022-02-25
公開日2022-10-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure and function of H + /K + pump mutants reveal Na + /K + pump mechanisms.
Nat Commun, 13, 2022
7X20
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BU of 7x20 by Molmil
Crystal structure of non gastric H,K-ATPase alpha2 in (K+)E2-AlF state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, POTASSIUM ION, Potassium-transporting ATPase alpha chain 2, ...
著者Nakanishi, H, Abe, K.
登録日2022-02-25
公開日2022-10-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure and function of H + /K + pump mutants reveal Na + /K + pump mechanisms.
Nat Commun, 13, 2022
7X21
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BU of 7x21 by Molmil
Cryo-EM structure of non gastric H,K-ATPase alpha2 K794A in (K+)E2-AlF state
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Nakanishi, H, Abe, K.
登録日2022-02-25
公開日2022-10-05
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure and function of H + /K + pump mutants reveal Na + /K + pump mechanisms.
Nat Commun, 13, 2022
5YLU
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BU of 5ylu by Molmil
Crystal structure of the gastric proton pump complexed with vonoprazan
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[5-(2-fluorophenyl)-1-pyridin-3-ylsulfonyl-pyrrol-3-yl]-~{N}-methyl-methanamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abe, K, Irie, K, Nakanishi, H, Fujiyoshi, Y.
登録日2017-10-19
公開日2018-04-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.79988956 Å)
主引用文献Crystal structures of the gastric proton pump
Nature, 556, 2018
5YLV
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BU of 5ylv by Molmil
Crystal structure of the gastric proton pump complexed with SCH28080
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-(2-methyl-8-phenylmethoxy-imidazo[1,2-a]pyridin-3-yl)ethanenitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abe, K, Irie, K, Nakanishi, H, Fujiyoshi, Y.
登録日2017-10-19
公開日2018-04-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.79977775 Å)
主引用文献Crystal structures of the gastric proton pump
Nature, 556, 2018
7X24
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BU of 7x24 by Molmil
Cryo-EM structure of non gastric H,K-ATPase alpha2 SPWC mutant in (2K+)E2-AlF state
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K, Nakanishi, H, Young, V, Artigas, P.
登録日2022-02-25
公開日2022-10-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure and function of H + /K + pump mutants reveal Na + /K + pump mechanisms.
Nat Commun, 13, 2022
7X23
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BU of 7x23 by Molmil
Cryo-EM structure of non gastric H,K-ATPase alpha2 SPWC mutant in 3Na+E1-AMPPCPF state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Potassium-transporting ATPase alpha chain 2, ...
著者Abe, K, Nakanishi, H, Young, V, Artigas, P.
登録日2022-02-25
公開日2022-10-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure and function of H + /K + pump mutants reveal Na + /K + pump mechanisms.
Nat Commun, 13, 2022
8K1L
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BU of 8k1l by Molmil
Cryo-EM structure of Na+,K+-ATPase alpha2 from Artemia salina in cation-free E2P form
分子名称: Na+,K+-ATPase alpha2KK, Na+,K+-ATPase beta2, TETRAFLUOROALUMINATE ION
著者Abe, K, Artigas, P.
登録日2023-07-11
公開日2023-11-29
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献A Na pump with reduced stoichiometry is up-regulated by brine shrimp in extreme salinities.
Proc.Natl.Acad.Sci.USA, 120, 2023
1RKR
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BU of 1rkr by Molmil
CRYSTAL STRUCTURE OF AZURIN-I FROM ALCALIGENES XYLOSOXIDANS NCIMB 11015
分子名称: AZURIN-I, COPPER (II) ION
著者Li, C, Inoue, T, Gotowda, M, Suzuki, S, Yamaguchi, K, Kataoka, K, Kai, Y.
登録日1997-05-17
公開日1998-05-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of azurin I from the denitrifying bacterium Alcaligenes xylosoxidans NCIMB 11015 at 2.45 A resolution.
Acta Crystallogr.,Sect.D, 54, 1998
3HAT
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BU of 3hat by Molmil
ACTIVE SITE MIMETIC INHIBITION OF THROMBIN
分子名称: FPAM (FIBRINOPEPTIDE A MIMIC), Hirudin variant-2, Thrombin heavy chain, ...
著者Tulinsky, A, Mathews, I.I.
登録日1994-10-16
公開日1995-02-27
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Active-site mimetic inhibition of thrombin.
Acta Crystallogr.,Sect.D, 51, 1995
6JXK
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BU of 6jxk by Molmil
Rb+-bound E2-MgF state of the gastric proton pump (Wild-type)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, MAGNESIUM ION, ...
著者Abe, K, Irie, K, Yamamoto, K.
登録日2019-04-23
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
6JXI
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BU of 6jxi by Molmil
Rb+-bound E2-MgF state of the gastric proton pump (Tyr799Trp)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K, Irie, K.
登録日2019-04-23
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
6JXH
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BU of 6jxh by Molmil
K+-bound E2-MgF state of the gastric proton pump (Tyr799Trp)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K, Irie, K.
登録日2019-04-23
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
6JXJ
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BU of 6jxj by Molmil
Rb+-bound E2-AlF state of the gastric proton pump (Tyr799Trp)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K, Irie, K.
登録日2019-04-23
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
1FPC
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BU of 1fpc by Molmil
ACTIVE SITE MIMETIC INHIBITION OF THROMBIN
分子名称: Hirudin, amino{[(4S)-4-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)-5-(4-ethylpiperidin-1-yl)-5-oxopentyl]amino}methaniminium, thrombin
著者Tulinsky, A, Mathews, I.I.
登録日1994-10-16
公開日1995-02-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Active-site mimetic inhibition of thrombin.
Acta Crystallogr.,Sect.D, 51, 1995
1A61
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BU of 1a61 by Molmil
THROMBIN COMPLEXED WITH A BETA-MIMETIC THIAZOLE-CONTAINING INHIBITOR
分子名称: (1S,7S)-7-amino-7-benzyl-N-{(1S)-4-carbamimidamido-1-[(S)-hydroxy(1,3-thiazol-2-yl)methyl]butyl}-8-oxohexahydro-1H-pyra zolo[1,2-a]pyridazine-1-carboxamide, ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), ...
著者St Charles, R, Matthews, J.H, Zhang, E, Tulinsky, A, Kahn, M.
登録日1998-03-05
公開日1998-06-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Bound structures of novel P3-P1' beta-strand mimetic inhibitors of thrombin.
J.Med.Chem., 42, 1999

 

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