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5FLM
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BU of 5flm by Molmil
Structure of transcribing mammalian RNA polymerase II
分子名称: DNA, DNA-RNA ELONGATION SCAFFOLD, DNA-DIRECTED RNA POLYMERASE, ...
著者Bernecky, C, Herzog, F, Baumeister, W, Plitzko, J.M, Cramer, P.
登録日2015-10-26
公開日2016-01-20
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of Transcribing Mammalian RNA Polymerase II
Nature, 529, 2016
3J0K
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BU of 3j0k by Molmil
Orientation of RNA polymerase II within the human VP16-Mediator-pol II-TFIIF assembly
分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, DNA-directed RNA polymerase II 19 kDa polypeptide, ...
著者Bernecky, C, Grob, P, Ebmeier, C.C, Nogales, E, Taatjes, D.J.
登録日2011-10-04
公開日2011-10-19
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (36 Å)
主引用文献Molecular architecture of the human Mediator-RNA polymerase II-TFIIF assembly.
Plos Biol., 9, 2011
5OHQ
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BU of 5ohq by Molmil
Crystal structure of the KOW6-KOW7 domain of human DSIF
分子名称: CHLORIDE ION, SODIUM ION, Transcription elongation factor SPT5
著者Bernecky, C, Plitzko, J.M, Cramer, P.
登録日2017-07-17
公開日2017-09-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.098 Å)
主引用文献Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
5OIK
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BU of 5oik by Molmil
Structure of an RNA polymerase II-DSIF transcription elongation complex
分子名称: DNA (43-MER), DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Bernecky, C, Plitzko, J.M, Cramer, P.
登録日2017-07-18
公開日2017-09-13
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
5OHO
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BU of 5oho by Molmil
Crystal structure of the KOWx-KOW4 domain of human DSIF
分子名称: CHLORIDE ION, GLYCEROL, Transcription elongation factor SPT5
著者Bernecky, C, Plitzko, J.M, Cramer, P.
登録日2017-07-17
公開日2017-09-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
8A43
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BU of 8a43 by Molmil
Human RNA polymerase I
分子名称: DNA-directed RNA polymerase I subunit RPA1, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA2, ...
著者Daiss, J.L, Pilsl, M, Straub, K, Bleckmann, A, Hoecherl, M, Heiss, F.B, Abascal-Palacios, G, Ramsay, E, Tluckova, K, Mars, J.C, Fuertges, T, Bruckmann, A, Rudack, T, Bernecky, C, Lamour, V, Panov, K, Vannini, A, Moss, T, Engel, C.
登録日2022-06-10
公開日2022-08-31
最終更新日2022-11-02
実験手法ELECTRON MICROSCOPY (4.09 Å)
主引用文献The human RNA polymerase I structure reveals an HMG-like docking domain specific to metazoans.
Life Sci Alliance, 5, 2022
5N61
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BU of 5n61 by Molmil
RNA polymerase I initially transcribing complex
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-02-14
公開日2017-04-05
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5O7X
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BU of 5o7x by Molmil
CRYSTAL STRUCTURE OF S. CEREVISIAE CORE FACTOR AT 3.2A RESOLUTION
分子名称: MAGNESIUM ION, RNA polymerase I-specific transcription initiation factor RRN11, RNA polymerase I-specific transcription initiation factor RRN6, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-06-09
公開日2017-08-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5N60
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BU of 5n60 by Molmil
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation I)
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-02-14
公開日2017-04-05
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5N5Z
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BU of 5n5z by Molmil
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation II)
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-02-14
公開日2017-04-05
最終更新日2018-10-03
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5N5Y
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BU of 5n5y by Molmil
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation III)
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-02-14
公開日2017-04-05
最終更新日2018-10-03
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
6Q2V
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BU of 6q2v by Molmil
Crystal structure of SPOC domain of human PHD-finger protein 3 (PHF3)
分子名称: GLYCEROL, PHD finger protein 3
著者Grishkovskaya, I, Slade, D, Djinovic-Carugo, K.
登録日2018-12-03
公開日2020-07-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.594 Å)
主引用文献PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
6Q5Y
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BU of 6q5y by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2Ser5
分子名称: PHD finger protein 3, pSer2pSer5
著者Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
登録日2018-12-09
公開日2020-07-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
6IC9
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BU of 6ic9 by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2Ser7
分子名称: PHD finger protein 3, TYR-SEP-PRO-THR-SER-PRO-SEP-TYR-SEP-PRO-THR-SER-PRO
著者Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
登録日2018-12-03
公開日2020-07-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.748 Å)
主引用文献PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
6IC8
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BU of 6ic8 by Molmil
Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2
分子名称: PHD finger protein 3, TYR-SEP-PRO-THR-SER-PRO-SER-TYR-SEP-PRO-THR
著者Grishkovskaya, I, Djinovic-Carugo, K, Slade, D.
登録日2018-12-02
公開日2020-07-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.929 Å)
主引用文献PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC
Nat Commun, 12, 2021
7YZ4
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BU of 7yz4 by Molmil
Mouse endoribonuclease Dicer (composite structure)
分子名称: Endoribonuclease Dicer
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-02-18
公開日2022-11-16
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7YYM
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BU of 7yym by Molmil
Mammalian Dicer in the "pre-dicing state" with pre-miR-15a substrate
分子名称: 59-nt precursor of miR-15a, Endoribonuclease Dicer
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-02-18
公開日2022-11-16
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.19 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7YYN
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BU of 7yyn by Molmil
Mammalian Dicer in the dicing state with pre-miR-15a substrate
分子名称: 59-nt precursor of miR-15a, Isoform 2 of Endoribonuclease Dicer
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-02-18
公開日2022-11-16
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (6.21 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7ZPJ
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BU of 7zpj by Molmil
Mammalian Dicer in the "pre-dicing state" with pre-miR-15a substrate and TARBP2 subunit
分子名称: 59-nt precursor of miR-15a, Endoribonuclease Dicer, RISC-loading complex subunit TARBP2 isoform 1
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-04-27
公開日2022-12-28
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7ZPK
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BU of 7zpk by Molmil
Mammalian Dicer in the "pre-dicing state" with pre-miR-15a substrate and TARBP2 subunit
分子名称: 59-nt precursor of miR-15a, Endoribonuclease Dicer, RISC-loading complex subunit TARBP2
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-04-27
公開日2022-11-16
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022
7ZPI
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BU of 7zpi by Molmil
Mammalian Dicer in the "dicing state" with pre-miR-15a substrate
分子名称: 59-nt precursor of miR-15a, Endoribonuclease Dicer
著者Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J.
登録日2022-04-27
公開日2022-11-16
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (5.91 Å)
主引用文献Structural and functional basis of mammalian microRNA biogenesis by Dicer.
Mol.Cell, 82, 2022

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