Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4WQR
DownloadVisualize
BU of 4wqr by Molmil
Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G.
登録日2014-10-22
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural insights into the translational infidelity mechanism.
Nat Commun, 6, 2015
6IGQ
DownloadVisualize
BU of 6igq by Molmil
Crystal structure of inactive state of S9 peptidase from Deinococcus radiodurans R1 (PMSF treated)
分子名称: Acyl-peptide hydrolase, putative, GLYCEROL, ...
著者Yadav, P, Goyal, V.D, Kumar, A, Makde, R.D.
登録日2018-09-25
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Carboxypeptidase in prolyl oligopeptidase family: Unique enzyme activation and substrate-screening mechanisms.
J.Biol.Chem., 294, 2019
4X3F
DownloadVisualize
BU of 4x3f by Molmil
Crystal structure of the intracellular domain of the M. tuberculosis Ser/Thr kinase PknA
分子名称: Serine/threonine-protein kinase PknA
著者Wagner, T, Wehenkel, A, Alzari, P.M, Bellinzoni, M.
登録日2014-11-28
公開日2015-01-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of the catalytic domain of the ser/thr kinase PknA from M. tuberculosis shows an Src-like autoinhibited conformation.
Proteins, 83, 2015
6IP7
DownloadVisualize
BU of 6ip7 by Molmil
Structure of human telomeric DNA with 5-Selenophene-modified deoxyuridine at residue 11
分子名称: DNA (22-MER), POTASSIUM ION
著者Saikrishnan, K, Nuthanakanti, A, Srivatsan, S.G, Ahmad, I.
登録日2018-11-02
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe.
Nucleic Acids Res., 47, 2019
6D0A
DownloadVisualize
BU of 6d0a by Molmil
Crystal structure of Kynurenine Aminotransferase-II in apo-form, at 1.47 A resolution
分子名称: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial
著者Jayawickrama, G.S, Sun, G, Nematollahi, A, Church, W.B.
登録日2018-04-10
公開日2018-05-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.46809423 Å)
主引用文献Crystal structure of Kynurenine Aminotransferase-II in apo-form
To Be Published
6D0P
DownloadVisualize
BU of 6d0p by Molmil
1.88 Angstrom Resolution Crystal Structure of Quercetin 2,3-dioxygenase from Acinetobacter baumannii
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Minasov, G, Shuvalova, L, Brunzelle, J.S, Dubrovska, I, Kiryukhina, O, Endres, M, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2018-04-10
公開日2018-04-25
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献1.88 Angstrom Resolution Crystal Structure of Quercetin 2,3-dioxygenase from Acinetobacter baumannii
To be Published
3SK0
DownloadVisualize
BU of 3sk0 by Molmil
structure of Rhodococcus rhodochrous haloalkane dehalogenase DhaA mutant DhaA12
分子名称: CHLORIDE ION, Haloalkane dehalogenase
著者Lahoda, M, Stsiapanava, A, Mesters, J, Koudelakova, T, Damborsky, J, Kuta-Smatanova, I.
登録日2011-06-22
公開日2012-06-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Dynamics and hydration explain failed functional transformation in dehalogenase design.
Nat.Chem.Biol., 10, 2014
6I8O
DownloadVisualize
BU of 6i8o by Molmil
Dye type peroxidase Aa from Streptomyces lividans: 39.2kGy structure
分子名称: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L.
登録日2018-11-20
公開日2019-07-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
Iucrj, 6, 2019
4WXK
DownloadVisualize
BU of 4wxk by Molmil
Crystal structure of a peptide deformylase from Haemophilus influenzae
分子名称: GLYCEROL, NICKEL (II) ION, Peptide deformylase
著者Kishor, C, Addlagatta, A.
登録日2014-11-14
公開日2015-11-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of a peptide deformylase from Haemophilus influenzae
To Be Published
4X1U
DownloadVisualize
BU of 4x1u by Molmil
The structure of AhpE from Mycobacterium tuberculosis revisited
分子名称: GLYCEROL, Putative peroxiredoxin MT2298
著者Pallo, A, Messens, J.
登録日2014-11-25
公開日2016-07-27
最終更新日2016-08-10
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Revisiting sulfur H-bonds in proteins: The example of peroxiredoxin AhpE.
Sci Rep, 6, 2016
1UCG
DownloadVisualize
BU of 1ucg by Molmil
Crystal structure of Ribonuclease MC1 N71T mutant
分子名称: MANGANESE (II) ION, Ribonuclease MC
著者Suzuki, A, Numata, T, Yao, M, Tanaka, I, Kimura, M.
登録日2003-04-14
公開日2003-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of the ribonuclease MC1 mutants N71T and N71S in complex with 5'-GMP: structural basis for alterations in substrate specificity
Biochemistry, 42, 2003
4X8K
DownloadVisualize
BU of 4x8k by Molmil
Mycobacterium tuberculosis RbpA-SID in complex with SigmaA domain 2
分子名称: 1,2-ETHANEDIOL, RNA polymerase sigma factor SigA, RNA polymerase-binding protein RbpA, ...
著者Hubin, E.A, Flack, J.E, Tabib-Salazar, A, Paget, M.S, Darst, S.A, Campbell, E.A.
登録日2014-12-10
公開日2015-06-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Structural, functional, and genetic analyses of the actinobacterial transcription factor RbpA.
Proc.Natl.Acad.Sci.USA, 112, 2015
6D0N
DownloadVisualize
BU of 6d0n by Molmil
Crystal structure of a CLC-type fluoride/proton antiporter, V319G mutant
分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, CLC-type fluoride/proton antiporter, DECYL-BETA-D-MALTOPYRANOSIDE, ...
著者Last, N.B, Stockbridge, R.B, Wilson, A.E, Shane, T, Kolmakova-Partensky, L, Koide, A, Koide, S, Miller, C.
登録日2018-04-10
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献A CLC-type F-/H+antiporter in ion-swapped conformations.
Nat. Struct. Mol. Biol., 25, 2018
4X8P
DownloadVisualize
BU of 4x8p by Molmil
Crystal structure of Ash2L SPRY domain in complex with RbBP5
分子名称: GLYCEROL, Retinoblastoma-binding protein 5, Set1/Ash2 histone methyltransferase complex subunit ASH2,Set1/Ash2 histone methyltransferase complex subunit ASH2
著者Zhang, P, Chaturvedi, C.P, Brunzelle, J.S, Skiniotis, G, Brand, M, Shilatifard, A, Couture, J.-F.
登録日2014-12-10
公開日2015-01-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A phosphorylation switch on RbBP5 regulates histone H3 Lys4 methylation.
Genes Dev., 29, 2015
4X8T
DownloadVisualize
BU of 4x8t by Molmil
FACTOR VIIA IN COMPLEX WITH THE INHIBITOR 7-chloro-3,4-dihydroisoquinolin-1(2H)-one
分子名称: 7-chloro-3,4-dihydroisoquinolin-1(2H)-one, CALCIUM ION, Factor VIIa (Heavy Chain), ...
著者Wei, A.
登録日2014-12-10
公開日2015-03-25
最終更新日2015-04-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of Novel P1 Groups for Coagulation Factor VIIa Inhibition Using Fragment-Based Screening.
J.Med.Chem., 58, 2015
6D1L
DownloadVisualize
BU of 6d1l by Molmil
Design, synthesis, and X-ray of selenides bearing benzenesulfonamide moiety with neuropathic pain modulating effects
分子名称: 4-[(but-2-yn-1-yl)selanyl]benzene-1-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
著者Peat, T.S, Angeli, A, di Cesare Mannelli, L, Micheli, L, Ghelardini, C, Supuran, C.T.
登録日2018-04-12
公開日2018-06-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Design, synthesis and X-ray crystallography of selenides bearing benzenesulfonamide moiety with neuropathic pain modulating effects.
Eur J Med Chem, 154, 2018
4WZD
DownloadVisualize
BU of 4wzd by Molmil
Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G.
登録日2014-11-19
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural insights into the translational infidelity mechanism.
Nat Commun, 6, 2015
6IOK
DownloadVisualize
BU of 6iok by Molmil
Cryo-EM structure of multidrug efflux pump MexAB-OprM (0 degree state)
分子名称: Multidrug resistance protein MexA, Multidrug resistance protein MexB, Outer membrane protein OprM
著者Tsutsumi, K, Yonehara, R, Nakagawa, A, Yamashita, E.
登録日2018-10-30
公開日2019-04-03
最終更新日2019-04-17
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Structures of the wild-type MexAB-OprM tripartite pump reveal its complex formation and drug efflux mechanism.
Nat Commun, 10, 2019
4X5K
DownloadVisualize
BU of 4x5k by Molmil
Human NAA50 complex with coenzyme A and an acetylated peptide
分子名称: ACE-MMAS, COENZYME A, N-alpha-acetyltransferase 50
著者Reddi, R, Addlagatta, A.
登録日2014-12-05
公開日2015-12-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.494 Å)
主引用文献Human NAA50 with coenzymeA and a peptide
To Be Published
2WHP
DownloadVisualize
BU of 2whp by Molmil
Crystal structure of acetylcholinesterase, phosphonylated by sarin and in complex with HI-6
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(AMINOCARBONYL)-1-[({2-[(E)-(HYDROXYIMINO)METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYRIDINIUM, ACETYLCHOLINESTERASE, ...
著者Ekstrom, F, Hornberg, A, Artursson, E, Hammarstrom, L.G, Schneider, G, Pang, Y.P.
登録日2009-05-06
公開日2009-06-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Hi-6Sarin-Acetylcholinesterase Determined by X-Ray Crystallography and Molecular Dynamics Simulation: Reactivator Mechanism and Design.
Plos One, 4, 2009
6CJJ
DownloadVisualize
BU of 6cjj by Molmil
Candida albicans Hsp90 nucleotide binding domain in complex with ADP
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Heat shock protein 90 homolog, ...
著者Hutchinson, A, Loppnau, P, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Hui, R, STRUCTURAL GENOMICS CONSORTIUM, S.G.C, Pizarro, J.C, Structural Genomics Consortium (SGC)
登録日2018-02-26
公開日2019-01-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural basis for species-selective targeting of Hsp90 in a pathogenic fungus.
Nat Commun, 10, 2019
6CJN
DownloadVisualize
BU of 6cjn by Molmil
Crystal Structure of Chalcone Isomerase from Medicago Sativa with the G95T mutation
分子名称: Chalcone--flavonone isomerase 1, SULFATE ION
著者Burke, J.R, La Clair, J.J, Philippe, R.N, Pabis, A, Jez, J.M, Cortina, G, Kaltenbach, M, Bowman, M.E, Woods, K.B, Nelson, A.T, Tawfik, D.S, Kamerlin, S.C.L, Noel, J.P.
登録日2018-02-26
公開日2019-03-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Bifunctional Substrate Activation via an Arginine Residue Drives Catalysis in Chalcone Isomerases
Acs Catalysis, 2019
4N7Y
DownloadVisualize
BU of 4n7y by Molmil
Crystal structure of 14-3-3zeta in complex with a 8-carbon-linker cyclic peptide derived from ExoS
分子名称: 14-3-3 protein zeta/delta, Exoenzyme S
著者Bier, D, Glas, A, Hahne, G, Grossmann, T, Ottmann, C.
登録日2013-10-16
公開日2014-02-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Constrained peptides with target-adapted cross-links as inhibitors of a pathogenic protein-protein interaction.
Angew.Chem.Int.Ed.Engl., 53, 2014
6IUE
DownloadVisualize
BU of 6iue by Molmil
DNA helical wire containing Hg(II)
分子名称: DNA (5'-D(*TP*TP*TP*GP*C)-3'), MERCURY (II) ION
著者Ono, A, Kanazawa, H, Ito, H, Goto, M, Nakamura, K, Saneyoshi, H, Kondo, J.
登録日2018-11-28
公開日2019-10-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献A Novel DNA Helical Wire Containing HgII-Mediated T:T and T:G Pairs.
Angew.Chem.Int.Ed.Engl., 58, 2019
4X8B
DownloadVisualize
BU of 4x8b by Molmil
Ergothioneine-biosynthetic sulfoxide synthase EgtB, apo form
分子名称: CALCIUM ION, CHLORIDE ION, FE (III) ION, ...
著者Vit, A, Goncharenko, K.V, Blankenfeldt, W, Seebeck, F.P.
登録日2014-12-10
公開日2015-01-28
最終更新日2017-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the Sulfoxide Synthase EgtB from the Ergothioneine Biosynthetic Pathway.
Angew.Chem.Int.Ed.Engl., 54, 2015

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon