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7OKN
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BU of 7okn by Molmil
Structure of the outer-membrane core complex (inner ring) from a conjugative type IV secretion system
分子名称: TraB, Type IV conjugative transfer system lipoprotein TraV
著者Amin, H, Ilangovan, A, Costa, T.R.D.
登録日2021-05-18
公開日2021-12-01
最終更新日2021-12-08
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Architecture of the outer-membrane core complex from a conjugative type IV secretion system.
Nat Commun, 12, 2021
2JLU
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BU of 2jlu by Molmil
Dengue virus 4 NS3 helicase in complex with ssRNA
分子名称: 5'-R(*AP*GP*AP*CP*UP*AP*AP*CP*AP*AP*CP*U)-3', GLYCEROL, SERINE PROTEASE SUBUNIT NS3
著者Luo, D.H, Xu, T, Watson, R.P, Becker, D.S, Sampath, A, Jahnke, W, Yeong, S.S, Wang, C.H, Lim, S.P, Vasudevan, S.G, Lescar, J.
登録日2008-09-15
公開日2008-11-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Insights Into RNA Unwinding and ATP Hydrolysis by the Flavivirus Ns3 Protein.
Embo J., 27, 2008
7ONP
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BU of 7onp by Molmil
Wild type carbonic anhydrase II with bound IrCp* complex to generate an artificial transfer hydrogenase (ATHase)
分子名称: 4-[2-(9-chloranyl-2',3',4',5',6'-pentamethyl-4-nitro-7-oxidanylidene-spiro[1$l^{4},8-diaza-9$l^{8}-iridabicyclo[4.3.0]nona-1,3,5-triene-9,1'-1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane]-8-yl)ethyl]benzenesulfonamide, ACETATE ION, Carbonic anhydrase 2, ...
著者Stein, A, Dongping, C, Cotelle, Y, Rebelein, J.G, Ward, T.R.
登録日2021-05-25
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.408 Å)
主引用文献A Dual Anchoring Strategy for the Directed Evolution of Improved Artificial Transfer Hydrogenases Based on Carbonic Anhydrase.
Acs Cent.Sci., 7, 2021
4RBS
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BU of 4rbs by Molmil
Crystal Structure of New Delhi Metallo-beta-Lactamase-1 in the Complex with Hydrolyzed Meropenem
分子名称: (2S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-3-methyl-2H-pyrro le-5-carboxylic acid, ACETIC ACID, Beta-lactamase NDM-1, ...
著者Kim, Y, Tesar, C, Jedrzejczak, R, Babnigg, G, Sacchettini, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2014-09-12
公開日2014-11-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.405 Å)
主引用文献Crystal Structure of New Delhi Metallo-beta-Lactamase-1 in the Complex with Hydrolyzed Meropenem
To be Published
7OVB
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BU of 7ovb by Molmil
L. pneumophila Type IV Coupling Complex (T4CC) with density for DotY N-terminal and middle domains
分子名称: DotY, DotZ, IcmJ (DotN), ...
著者Mace, K, Meir, A, Lukoyanova, N, Waksman, G.
登録日2021-06-14
公開日2021-12-01
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献Proteins DotY and DotZ modulate the dynamics and localization of the type IVB coupling complex of Legionella pneumophila.
Mol.Microbiol., 117, 2022
3RKK
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BU of 3rkk by Molmil
Crystal Structure of New Delhi Metallo-Beta-Lactamase-1 from Klebsiella pneumoniae
分子名称: ACETIC ACID, Beta-lactamase NDM-1, GLYCEROL, ...
著者Kim, Y, Tesar, C, Jedrzejczak, R, Binkowski, T.A, Babnigg, G, Sacchettini, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2011-04-18
公開日2011-05-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of Apo- and Monometalated Forms of NDM-1 A Highly Potent Carbapenem-Hydrolyzing Metallo-beta-Lactamase
Plos One, 6, 2011
4RCT
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BU of 4rct by Molmil
Crystal structure of R-protein of NgoAVII restriction endonuclease
分子名称: Restriction endonuclease R.NgoVII
著者Tamulaitiene, G, Silanskas, A, Grazulis, S, Zaremba, M, Siksnys, V.
登録日2014-09-17
公開日2014-12-24
最終更新日2014-12-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
Nucleic Acids Res., 42, 2014
5K3K
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BU of 5k3k by Molmil
Crystal structure of laccase from Thermus thermophilus HB27 (CuSO4, 20 min)
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ...
著者Diaz-Vilchis, A, Ruiz-Arellano, R.R, Rosas-Benitez, E, Rudino-Pinera, E.
登録日2016-05-19
公開日2017-05-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.644 Å)
主引用文献Preserving metallic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase
To be Published
3JCA
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BU of 3jca by Molmil
Core model of the Mouse Mammary Tumor Virus intasome
分子名称: 5'-D(*AP*AP*TP*GP*CP*CP*GP*CP*AP*GP*TP*CP*GP*GP*CP*CP*GP*AP*CP*CP*TP*G)-3', 5'-D(*CP*AP*GP*GP*TP*CP*GP*GP*CP*CP*GP*AP*CP*TP*GP*CP*GP*GP*CP*A)-3', Integrase, ...
著者Lyumkis, D.L, Ballandras-Colas, A, Brown, M, Cook, N.J, Dewdney, T.G, Demeler, B, Cherepanov, P, Engelman, A.N.
登録日2015-11-24
公開日2016-02-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Cryo-EM reveals a novel octameric integrase structure for betaretroviral intasome function.
Nature, 530, 2016
4R1H
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BU of 4r1h by Molmil
GntR family transcriptional regulator from Listeria monocytogenes
分子名称: ACETATE ION, Lmo0741 protein
著者Osipiuk, J, Mack, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-08-05
公開日2014-08-20
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献GntR family transcriptional regulator from Listeria monocytogenes
To be Published
4R2B
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BU of 4r2b by Molmil
Crystal structure of sugar transporter Oant_3817 from Ochrobactrum anthropi, target EFI-510528, with bound glucose
分子名称: Extracellular solute-binding protein family 1, alpha-D-glucopyranose
著者Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-08-11
公開日2014-08-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal Structure of Glucose Transporter Oant_3817 from Ochrobactrum Anthropi, Target EFI-510528
To be Published
2JK9
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BU of 2jk9 by Molmil
The structure of splA-ryanodine receptor domain and SOCS box containing 1 in complex with a PAR-4 peptide
分子名称: PRKC APOPTOSIS WT1 REGULATOR PROTEIN, SPRY DOMAIN-CONTAINING SOCS BOX PROTEIN 1
著者Filippakopoulos, P, Bullock, A, Keates, T, Savitsky, P, Murray, J.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Wickstroem, M, Bountra, C, Knapp, S.
登録日2008-08-22
公開日2008-09-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural Basis for Par-4 Recognition by the Spry Domain-and Socs Box-Containing Proteins Spsb1, Spsb2, and Spsb4.
J.Mol.Biol., 401, 2010
8TBV
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BU of 8tbv by Molmil
Human Class I MHC HLA-A2 in complex with sorting nexin 24 (127-135) neoantigen KLSHQLVLL
分子名称: Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Arbuiso, A, Weiss, L.I, Brambley, C.A, Ma, J, Keller, G.L.J, Ayres, C.M, Baker, B.M.
登録日2023-06-29
公開日2024-01-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Accurate modeling of peptide-MHC structures with AlphaFold.
Structure, 32, 2024
5K84
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BU of 5k84 by Molmil
Crystal structure of laccase from Thermus thermophilus HB27 (sodium nitrate 10 min)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Laccase
著者Diaz-Vilchis, A, Ruiz-Arellano, R.R, Rosas-Benitez, E, Rudino-Pinera, E.
登録日2016-05-27
公開日2017-06-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Preserving metallic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase
To be Published
7OTI
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BU of 7oti by Molmil
Structure of ABCB1/P-glycoprotein in apo state
分子名称: Multidrug resistance protein 1A
著者Ford, R.C, Barbieri, A, Thonghin, N, Shafi, T, Prince, S.M, Collins, R.F.
登録日2021-06-10
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of ABCB1/P-Glycoprotein in the Presence of the CFTR Potentiator Ivacaftor.
Membranes (Basel), 11, 2021
7P9K
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BU of 7p9k by Molmil
BrxU, GmrSD-family Type IV restriction enzyme
分子名称: CHLORIDE ION, DUF262 domain-containing protein, GLYCEROL, ...
著者Picton, D.M, Luyten, Y, Morgan, R.D, Nelson, A, Smith, D.L, Dryden, D.T.F, Hinton, J.C.D, Blower, T.R.
登録日2021-07-27
公開日2021-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献The phage defence island of a multidrug resistant plasmid uses both BREX and type IV restriction for complementary protection from viruses.
Nucleic Acids Res., 49, 2021
7P9M
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BU of 7p9m by Molmil
BrxU, GmrSD-family Type IV restriction enzyme
分子名称: CHLORIDE ION, DUF262 domain-containing protein, SULFATE ION
著者Picton, D.M, Luyten, Y, Morgan, R.D, Nelson, A, Smith, D.L, Dryden, D.T.F, Hinton, J.C.D, Blower, T.R.
登録日2021-07-27
公開日2021-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The phage defence island of a multidrug resistant plasmid uses both BREX and type IV restriction for complementary protection from viruses.
Nucleic Acids Res., 49, 2021
7OTG
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BU of 7otg by Molmil
Structure of ABCB1/P-glycoprotein in the presence of the CFTR potentiator ivacaftor
分子名称: Multidrug resistance protein 1A, N-(2,4-di-tert-butyl-5-hydroxyphenyl)-4-oxo-1,4-dihydroquinoline-3-carboxamide
著者Ford, R.C, Barbieri, A, Thonghin, N, Shafi, T, Prince, S.M, Collins, R.F.
登録日2021-06-10
公開日2021-12-08
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Structure of ABCB1/P-Glycoprotein in the Presence of the CFTR Potentiator Ivacaftor.
Membranes (Basel), 11, 2021
4R7J
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BU of 4r7j by Molmil
Crystal Structure of Inosine 5'-monophosphate Dehydrogenase with the Internal Deletion Containing CBS Domain from Campylobacter jejuni
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Kim, Y, Makowska-Grzyska, M, Gu, M, Hedstrom, L, Anderson, W.F, Joachimiak, A, CSGID, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-08-27
公開日2014-09-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1172 Å)
主引用文献Crystal Structure of Inosine 5'-monophosphate Dehydrogenase with the Internal Deletion Containing CBS Domain from Campylobacter jejuni
To be Published, 2014
7OSA
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BU of 7osa by Molmil
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0, ...
著者Djumagulov, M, Jenner, L, Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G.
登録日2021-06-08
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Accuracy mechanism of eukaryotic ribosome translocation.
Nature, 600, 2021
4QSR
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BU of 4qsr by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) with bound MPD
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ATPase family AAA domain-containing protein 2, GLYCEROL, ...
著者Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2014-07-06
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based approaches towards identification of fragments for the low-druggability ATAD2 bromodomain
MedChemComm, 5, 2014
8B7I
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BU of 8b7i by Molmil
Human HSP90 alpha ATP Binding Domain, ATP-lid open conformation, R60A
分子名称: HSP90AA1 protein
著者Rioual, E, Henot, F, Favier, A, Macek, P, Crublet, E, Josso, P, Brutscher, B, Frech, M, Gans, P, Loison, C, Boisbouvier, J.
登録日2022-09-30
公開日2022-11-16
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Visualizing the transiently populated closed-state of human HSP90 ATP binding domain.
Nat Commun, 13, 2022
4QSX
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BU of 4qsx by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) in complex with 3'-deoxy thymidine
分子名称: 1,2-ETHANEDIOL, 1-[(2R,5S)-5-(hydroxymethyl)tetrahydrofuran-2-yl]-5-methylpyrimidine-2,4(1H,3H)-dione, ATPase family AAA domain-containing protein 2, ...
著者Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2014-07-06
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structure-based approaches towards identification of fragments for the low-druggability ATAD2 bromodomain
MedChemComm, 5, 2014
7OKO
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BU of 7oko by Molmil
Structure of the outer-membrane core complex (outer ring) from a conjugative type IV secretion system
分子名称: TraB, Type IV conjugative transfer system lipoprotein TraV, Type-F conjugative transfer system secretin TraK
著者Amin, H, Ilangovan, A, Costa, T.R.D.
登録日2021-05-18
公開日2021-12-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Architecture of the outer-membrane core complex from a conjugative type IV secretion system.
Nat Commun, 12, 2021
8B7J
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BU of 8b7j by Molmil
Human HSP90 alpha ATP Binding Domain, ATP-lid closed conformation, R46A
分子名称: HSP90AA1 protein
著者Rioual, E, Henot, F, Favier, A, Macek, P, Crublet, E, Josso, P, Brustcher, B, Frech, M, Gans, P, Loison, C, Boisbouvier, J.
登録日2022-09-30
公開日2022-11-16
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Visualizing the transiently populated closed-state of human HSP90 ATP binding domain.
Nat Commun, 13, 2022

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