Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5TR7
DownloadVisualize
BU of 5tr7 by Molmil
Crystal structure of a putative D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae O1 biovar eltor str. N16961
分子名称: D-alanyl-D-alanine carboxypeptidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Shatsman, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-10-25
公開日2016-11-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of a putative D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae O1 biovar eltor str. N16961
To Be Published
5T7O
DownloadVisualize
BU of 5t7o by Molmil
Crystal structure of Trypanosoma cruzi Dihydrofolate Reductase-Thymidylate Synthase in complex with (6S)-5,6,7,8-TETRAHYDROFOLATE
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, ...
著者Di Pisa, F, Dello Iacono, L, Bonucci, A, Mangani, S.
登録日2016-09-05
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Trypanosoma cruzi Dihydrofolate Reductase-Thymidylate Synthase in complex with (6S)-5,6,7,8-TETRAHYDROFOLATE
To Be Published
5TK4
DownloadVisualize
BU of 5tk4 by Molmil
Crystal Structure of Uncharacterized Cupredoxin-like Domain Protein from Bacillus anthracis
分子名称: Cytochrome B
著者Kim, Y, Maltseva, N, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-10-06
公開日2016-11-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Crystal Structure of Uncharacterized Cupredoxin-like Domain Protein from Bacillus anthracis
To Be Published
5V9X
DownloadVisualize
BU of 5v9x by Molmil
Structure of Mycobacterium smegmatis helicase Lhr bound to ssDNA and AMP-PNP
分子名称: ATP-dependent DNA helicase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Ordonez, H, Jacewicz, A, Ferrao, R, Shuman, S.
登録日2017-03-23
公開日2017-12-06
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.797 Å)
主引用文献Structure of mycobacterial 3'-to-5' RNA:DNA helicase Lhr bound to a ssDNA tracking strand highlights distinctive features of a novel family of bacterial helicases.
Nucleic Acids Res., 46, 2018
5TK2
DownloadVisualize
BU of 5tk2 by Molmil
Crystal Structure of Uncharacterized Cupredoxin-like domain protein from Bacillus anthracis
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Cytochrome B, ...
著者Kim, Y, Maltseva, N, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-10-06
公開日2016-11-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of Uncharacterized Cupredoxin-like domain protein from Bacillus anthracis
To Be Published
5W3F
DownloadVisualize
BU of 5w3f by Molmil
Yeast tubulin polymerized with GTP in vitro
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Howes, S.C, Geyer, E.A, LaFrance, B, Zhang, R, Kellogg, E.H, Westermann, S, Rice, L.M, Nogales, E.
登録日2017-06-07
公開日2017-07-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural differences between yeast and mammalian microtubules revealed by cryo-EM.
J. Cell Biol., 216, 2017
5W3H
DownloadVisualize
BU of 5w3h by Molmil
Yeast microtubule stabilized with epothilone
分子名称: EPOTHILONE A, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Howes, S.C, Geyer, E.A, LaFrance, B, Zhang, R, Kellogg, E.H, Westermann, S, Rice, L.M, Nogales, E.
登録日2017-06-07
公開日2017-07-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural differences between yeast and mammalian microtubules revealed by cryo-EM.
J. Cell Biol., 216, 2017
4ZTD
DownloadVisualize
BU of 4ztd by Molmil
Crystal Structure of Human PCNA in complex with a TRAIP peptide
分子名称: ALA-GLY-ALA-GLY-ALA, ALA-PHE-GLN-ALA-LYS-LEU-ASP-THR-PHE-LEU-TRP-SER, Proliferating cell nuclear antigen
著者Montoya, G, Mortuza, G.B, Blanco, F.J, Ibanez de Opakua, A.
登録日2015-05-14
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献TRAIP is a PCNA-binding ubiquitin ligase that protects genome stability after replication stress.
J.Cell Biol., 212, 2016
7DPI
DownloadVisualize
BU of 7dpi by Molmil
Plasmodium falciparum cytoplasmic Phenylalanyl-tRNA synthetase in complex with BRD7929
分子名称: (8R,9S,10S)-10-[(dimethylamino)methyl]-N-(4-methoxyphenyl)-9-[4-(2-phenylethynyl)phenyl]-1,6-diazabicyclo[6.2.0]decane-6-carboxamide, MAGNESIUM ION, Phenylalanine--tRNA ligase, ...
著者Manmohan, S, Malhotra, N, Harlos, K, Manickam, Y, Sharma, A.
登録日2020-12-19
公開日2022-03-23
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.597 Å)
主引用文献Inhibition of Plasmodium falciparum phenylalanine tRNA synthetase provides opportunity for antimalarial drug development.
Structure, 30, 2022
2GU1
DownloadVisualize
BU of 2gu1 by Molmil
Crystal structure of a zinc containing peptidase from vibrio cholerae
分子名称: SODIUM ION, ZINC ION, Zinc peptidase
著者Sugadev, R, Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-04-28
公開日2006-07-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a putative lysostaphin peptidase from Vibrio cholerae.
Proteins, 72, 2008
9FCH
DownloadVisualize
BU of 9fch by Molmil
P116 dimer in the full state (PDB structure of the full-length ectodomain truncated to amino acids 246-818)
分子名称: Uncharacterized protein MG075 homolog
著者Mager, S.
登録日2024-05-15
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (6.52 Å)
主引用文献P116 from Mycoplasma is a self-sufficient lipid uptake and delivery machinery
To Be Published
1YYN
DownloadVisualize
BU of 1yyn by Molmil
A common binding site for disialyllactose and a tri-peptide in the C-fragment of tetanus neurotoxin
分子名称: N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-3)-alpha-D-galactopyranose-(1-4)-beta-D-glucopyranose, Tetanus toxin
著者Seetharaman, J, Eswaramoorthy, S, Kumaran, D, Swaminathan, S.
登録日2005-02-25
公開日2005-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Common binding site for disialyllactose and tri-peptide in C-fragment of tetanus neurotoxin
Proteins, 61, 2005
3C0K
DownloadVisualize
BU of 3c0k by Molmil
Crystal Structure of a ribosomal RNA methyltranferase
分子名称: UPF0064 protein yccW
著者Subramanian, S, Jayaraman, S, Bujnicki, J.
登録日2008-01-21
公開日2008-11-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes
J.Mol.Biol., 383, 2008
3QBN
DownloadVisualize
BU of 3qbn by Molmil
Structure of Human Aurora A in Complex with a diaminopyrimidine
分子名称: 5-chloro-N~4~-cyclopropyl-N~2~-[4-(2-methoxyethoxy)phenyl]pyrimidine-2,4-diamine, Serine/threonine-protein kinase 6
著者Gruetter, C, Simard, J.R, Rauh, D.
登録日2011-01-13
公開日2012-01-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Identification of Ustilago maydis Aurora kinase as a novel antifungal target.
Acs Chem.Biol., 6, 2011
2M59
DownloadVisualize
BU of 2m59 by Molmil
Spatial structure of dimeric VEGFR2 membrane domain in DPC micelles
分子名称: Vascular endothelial growth factor receptor 2
著者Mineev, K.S, Arseniev, A.S, Shulepko, M.A, Lyukmanova, E.N.
登録日2013-02-19
公開日2014-03-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and functional characterization of alternative transmembrane domain conformations in VEGF receptor 2 activation.
Structure, 22, 2014
2MET
DownloadVisualize
BU of 2met by Molmil
NMR spatial structure of the trimeric mutant TM domain of VEGFR2 receptor.
分子名称: Vascular endothelial growth factor receptor 2
著者Mineev, K.S, Arseniev, A.A, Shulepko, M, Lyukmanova, E.N, Kirpichnikov, M.P.
登録日2013-10-02
公開日2014-07-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and functional characterization of alternative transmembrane domain conformations in VEGF receptor 2 activation
Structure, 22, 2014
2MEU
DownloadVisualize
BU of 2meu by Molmil
NMR spatial structure of mutant dimeric TM domain of VEGFR2 receptor
分子名称: Vascular endothelial growth factor receptor 2
著者Mineev, K.S, Arseniev, A.S, Lyukmanova, E.N, Shulepko, M.A, Kirpichnikov, M.P.
登録日2013-10-02
公開日2014-07-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and functional characterization of alternative transmembrane domain conformations in VEGF receptor 2 activation
Structure, 22, 2014
6Z17
DownloadVisualize
BU of 6z17 by Molmil
PqsR (MvfR) in complex with antagonist 6
分子名称: 6-chloranyl-3-[(2-propan-2-yl-2,3-dihydro-1,3-thiazol-4-yl)methyl]quinazolin-4-one, Transcriptional regulator MvfR
著者Richardson, W.K, Emsley, J.
登録日2020-05-12
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Novel quinazolinone inhibitors of the Pseudomonas aeruginosa quorum sensing transcriptional regulator PqsR.
Eur.J.Med.Chem., 208, 2020
6YZ3
DownloadVisualize
BU of 6yz3 by Molmil
PqsR (MvfR) in complex with antagonist 19
分子名称: 1,2-ETHANEDIOL, 6-chloranyl-3-[(2-hexyl-2,3-dihydro-1,3-thiazol-4-yl)methyl]quinazolin-4-one, LysR family transcriptional regulator
著者Richardson, W.K, Emsley, J.
登録日2020-05-06
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Novel quinazolinone inhibitors of the Pseudomonas aeruginosa quorum sensing transcriptional regulator PqsR.
Eur.J.Med.Chem., 208, 2020
6Z07
DownloadVisualize
BU of 6z07 by Molmil
PqsR (MvfR) in complex with antagonist 12
分子名称: 3-[(2-~{tert}-butyl-1,3-thiazol-4-yl)methyl]-6-chloranyl-quinazolin-4-one, GLYCEROL, Transcriptional regulator MvfR
著者Richardson, W.K, Emsley, J.
登録日2020-05-07
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Novel quinazolinone inhibitors of the Pseudomonas aeruginosa quorum sensing transcriptional regulator PqsR.
Eur.J.Med.Chem., 208, 2020
6Z5K
DownloadVisualize
BU of 6z5k by Molmil
PqsR (MvfR) in complex with antagonist 18
分子名称: 6-chloranyl-3-[(2-pentyl-2,3-dihydro-1,3-thiazol-4-yl)methyl]quinazolin-4-one, Transcriptional regulator MvfR
著者Richardson, W.K, Emsley, J.
登録日2020-05-26
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献Novel quinazolinone inhibitors of the Pseudomonas aeruginosa quorum sensing transcriptional regulator PqsR.
Eur.J.Med.Chem., 208, 2020
6KJL
DownloadVisualize
BU of 6kjl by Molmil
Xylanase J from Bacillus sp. strain 41M-1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
著者Manami, S, Teisuke, T, Nakatani, K, Katano, K, Kojima, K, Saka, N, Mikami, B, Yatsunami, R, Nakamura, S, Yasukawa, K.
登録日2019-07-22
公開日2019-09-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Increase in the thermostability of GH11 xylanase XynJ from Bacillus sp. strain 41M-1 using site saturation mutagenesis.
Enzyme.Microb.Technol., 130, 2019
2OUX
DownloadVisualize
BU of 2oux by Molmil
Crystal structure of the soluble part of a magnesium transporter
分子名称: MAGNESIUM ION, Magnesium transporter
著者Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-02-12
公開日2007-03-20
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural studies on cytosolic domain of magnesium transporter MgtE from Enterococcus faecalis.
Proteins, 78, 2010
8GCY
DownloadVisualize
BU of 8gcy by Molmil
Co-crystal structure of CBL-B in complex with N-Aryl isoindolin-1-one inhibitor
分子名称: 1,2-ETHANEDIOL, 2-{3-[(1s,3R)-3-methyl-1-(4-methyl-4H-1,2,4-triazol-3-yl)cyclobutyl]phenyl}-6-{[(3S)-3-methylpiperidin-1-yl]methyl}-4-(trifluoromethyl)-2,3-dihydro-1H-isoindol-1-one, E3 ubiquitin-protein ligase CBL-B, ...
著者Kimani, S, Zeng, H, Dong, A, Li, Y, Santhakumar, V, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2023-03-03
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献The co-crystal structure of Cbl-b and a small-molecule inhibitor reveals the mechanism of Cbl-b inhibition.
Commun Biol, 6, 2023
2KS6
DownloadVisualize
BU of 2ks6 by Molmil
NMR solution structure of ALG13 --- obtained with iterative CS-Rosetta from backbone NMR data.
分子名称: UDP-N-acetylglucosamine transferase subunit ALG13
著者Lange, O.F, Wang, X, Prestegard, J.H, Baker, D.
登録日2009-12-29
公開日2011-01-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR structure determination for larger proteins using backbone-only data.
Science, 327, 2010

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon