Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2V64
DownloadVisualize
BU of 2v64 by Molmil
Crystallographic structure of the conformational dimer of the Spindle Assembly Checkpoint protein Mad2.
分子名称: MBP1, MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A
著者Mapelli, M, Massimiliano, L, Santaguida, S, Musacchio, A.
登録日2007-07-13
公開日2007-11-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The MAD2 Conformational Dimer: Structure and Implications for the Spindle Assembly Checkpoint
Cell(Cambridge,Mass.), 131, 2007
6H1Y
DownloadVisualize
BU of 6h1y by Molmil
CRYSTAL STRUCTURE OF A CHIMERIC VARIANT OF THIOREDOXIN FROM ESCHERICHIA COLI
分子名称: Thioredoxin 1,Thioredoxin (TrxA-1),Thioredoxin 1
著者Ruggiero, A, Smaldone, G, Esposito, L, Balasco, N, Vitagliano, L.
登録日2018-07-12
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Loop size optimization induces a strong thermal stabilization of the thioredoxin fold.
Febs J., 286, 2019
2PEG
DownloadVisualize
BU of 2peg by Molmil
Crystal structure of Trematomus bernacchii hemoglobin in a partial hemichrome state
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Vergara, A, Franzese, M, Merlino, A, Vitagliano, L, Mazzarella, L.
登録日2007-04-03
公開日2007-07-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural characterization of ferric hemoglobins from three antarctic fish species of the suborder notothenioidei.
Biophys.J., 93, 2007
2JQG
DownloadVisualize
BU of 2jqg by Molmil
Leader Protease
分子名称: Genome polyprotein
著者Cencic, R, Mayer, C, Juliano, M.A, Juliano, L, Konrat, R, Kontaxis, G, Skern, T.
登録日2007-06-01
公開日2007-07-24
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Investigating the Substrate Specificity and Oligomerisation of the Leader Protease of Foot and Mouth Disease Virus using NMR
J.Mol.Biol., 373, 2007
2JQF
DownloadVisualize
BU of 2jqf by Molmil
Full Length Leader Protease of Foot and Mouth Disease Virus C51A Mutant
分子名称: Genome polyprotein
著者Cencic, R, Mayer, C, Juliano, M.A, Juliano, L, Konrat, R, Kontaxis, G, Skern, T.
登録日2007-06-01
公開日2007-07-17
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Investigating the Substrate Specificity and Oligomerisation of the Leader Protease of Foot and Mouth Disease Virus using NMR
J.Mol.Biol., 373, 2007
8F8E
DownloadVisualize
BU of 8f8e by Molmil
Crystal structure of the WDR domain of human DCAF1 in complex with OICR-8268 compound
分子名称: (3P)-N-[(1S)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]-3-(4-chloro-2-fluorophenyl)-1H-pyrazole-4-carboxamide, CITRIC ACID, DDB1- and CUL4-associated factor 1
著者Kimani, S, Li, A, Dong, A, Li, Y, Hutchinson, A, Seitova, A, Wilson, B, Al-Awar, R, Vedadi, M, Brown, P, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2022-11-21
公開日2023-03-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the WDR domain of human DCAF1 in complex with OICR-8268 compound
To be published
8G5E
DownloadVisualize
BU of 8g5e by Molmil
Crystal Structure of SETDB1 Tudor domain in complex with UNC6535
分子名称: Histone-lysine N-methyltransferase SETDB1, N~4~-[6-(dimethylamino)hexyl]-N~2~-[5-(dimethylamino)pentyl]-6,7-dimethoxyquinazoline-2,4-diamine, UNKNOWN ATOM OR ION
著者Beldar, S, Dong, A, Brown, P.J, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2023-02-13
公開日2023-02-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal Structure of SETDB1 Tudor domain in complex with UNC6535
To be published
8GCY
DownloadVisualize
BU of 8gcy by Molmil
Co-crystal structure of CBL-B in complex with N-Aryl isoindolin-1-one inhibitor
分子名称: 1,2-ETHANEDIOL, 2-{3-[(1s,3R)-3-methyl-1-(4-methyl-4H-1,2,4-triazol-3-yl)cyclobutyl]phenyl}-6-{[(3S)-3-methylpiperidin-1-yl]methyl}-4-(trifluoromethyl)-2,3-dihydro-1H-isoindol-1-one, E3 ubiquitin-protein ligase CBL-B, ...
著者Kimani, S, Zeng, H, Dong, A, Li, Y, Santhakumar, V, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2023-03-03
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献The co-crystal structure of Cbl-b and a small-molecule inhibitor reveals the mechanism of Cbl-b inhibition.
Commun Biol, 6, 2023
6Q3U
DownloadVisualize
BU of 6q3u by Molmil
Gly52Ala mutant of arginine-bound ArgBP from T. maritima
分子名称: ARGININE, Amino acid ABC transporter, periplasmic amino acid-binding protein, ...
著者Balasco, N, Smaldone, G, Ruggiero, A, Vitagliano, L.
登録日2018-12-04
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献The characterization of Thermotoga maritima Arginine Binding Protein variants demonstrates that minimal local strains have an important impact on protein stability.
Sci Rep, 9, 2019
7MEQ
DownloadVisualize
BU of 7meq by Molmil
Crystal structure of human TMPRSS2 in complex with Nafamostat
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-carbamimidamidobenzoic acid, Transmembrane protease serine 2, ...
著者Fraser, B, Beldar, S, Hutchinson, A, Li, Y, Seitova, A, Edwards, A.M, Benard, F, Arrowsmith, C.H, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2021-04-07
公開日2021-04-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure and activity of human TMPRSS2 protease implicated in SARS-CoV-2 activation.
Nat.Chem.Biol., 18, 2022
5WAX
DownloadVisualize
BU of 5wax by Molmil
Crystal Structure of Sugarcane SAPK10 (serine/threonine-protein kinase 10)
分子名称: GLYCEROL, SAPK10 (serine/threonine-protein kinase 10)
著者Righetto, G.L, Counago, R.M, Halabelian, L, Santiago, A.S, Massirer, K.B, Arruda, P, Gileadi, O, Menossi, M, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2017-06-27
公開日2018-08-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Sugarcane SAPK10 (serine/threonine-protein kinase 10)
To Be Published
5YAW
DownloadVisualize
BU of 5yaw by Molmil
Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
分子名称: 3-[(4-methoxyphenyl)methylsulfanyl]-5-(2-methylpropyl)-4-(phenylmethyl)-1,2,4-triazole, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
著者Bing, X, Yanlian, L, Danyan, C.
登録日2017-09-01
公開日2018-09-05
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.027 Å)
主引用文献Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
To Be Published
5YAV
DownloadVisualize
BU of 5yav by Molmil
Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
分子名称: 1-phenyl-5-propan-2-ylsulfanyl-1,2,3,4-tetrazole, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
著者Bing, X, Yanlian, L, Danyan, C.
登録日2017-09-01
公開日2018-09-05
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.989 Å)
主引用文献Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
To Be Published
5YOU
DownloadVisualize
BU of 5you by Molmil
Crystal structure of BRD4-BD1 bound with hjp64
分子名称: (3~{R})-4-cyclopropyl-~{N},1,3-trimethyl-~{N}-(4-methylphenyl)-2-oxidanylidene-3~{H}-quinoxaline-6-carboxamide, Bromodomain-containing protein 4
著者Bing, X, Jianping, H, Yanlian, L, Danyan, C.
登録日2017-10-31
公開日2018-11-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.503 Å)
主引用文献Crystal structure of BRD4-BD1 bound with hjp64
To Be Published
6Y16
DownloadVisualize
BU of 6y16 by Molmil
CRYSTAL STRUCTURE OF TMARGBP DOMAIN 1 IN COMPLEX WITH THE GUANIDINIUM ION
分子名称: 1,2-ETHANEDIOL, Amino acid ABC transporter, periplasmic amino acid-binding protein,Amino acid ABC transporter, ...
著者Ruggiero, A, Balasco, N, Smaldone, G, Graziano, G, Vitagliano, L.
登録日2020-02-11
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Guanidinium binding to proteins: The intriguing effects on the D1 and D2 domains of Thermotoga maritima Arginine Binding Protein and a comprehensive analysis of the Protein Data Bank.
Int.J.Biol.Macromol., 163, 2020
2AA1
DownloadVisualize
BU of 2aa1 by Molmil
Crystal structure of the cathodic hemoglobin isolated from the Antarctic fish Trematomus Newnesi
分子名称: Hemoglobin alpha-1 chain, Hemoglobin beta-C chain, PROTOPORPHYRIN IX CONTAINING FE
著者Mazzarella, L, Bonomi, G, Lubrano, M.C, Merlino, A, Riccio, A, Vergara, A, Vitagliano, L, Verde, C, Di Prisco, G.
登録日2005-07-13
公開日2005-08-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Minimal structural requirements for root effect: crystal structure of the cathodic hemoglobin isolated from the antarctic fish Trematomus newnesi
Proteins, 62, 2006
8T9A
DownloadVisualize
BU of 8t9a by Molmil
CryoEM structure of human DDB1-DCAF12 in complex with MAGEA3
分子名称: DDB1- and CUL4-associated factor 12, DNA damage-binding protein 1, Melanoma-associated antigen 3
著者Duda, D, Righetto, G, Li, Y, Loppnau, P, Seitova, A, Santhakumar, V, Halabelian, L, Yin, Y.
登録日2023-06-23
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献CryoEM structure of human DDB1-DCAF12 in complex with MAGEA3
To Be Published
8UWP
DownloadVisualize
BU of 8uwp by Molmil
Crystal structure of SETDB1 Tudor domain in complex with MR46747
分子名称: (3S)-N-(4-chloro-3-{[2-(diethylamino)ethyl]carbamoyl}phenyl)-3-(diethylamino)pyrrolidine-1-carboxamide, 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, ...
著者Shrestha, S, Beldar, S, Dong, A, Ackloo, S, Brown, P.J, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2023-11-07
公開日2023-11-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of SETDB1 Tudor domain in complex with MR46747
To be published
8VL7
DownloadVisualize
BU of 8vl7 by Molmil
Co-crystal structure of human TREX1 in complex with an inhibitor
分子名称: (2P)-2-[3-bromo-2-(2-hydroxyethoxy)phenyl]-5-hydroxy-1-methyl-N-(1,2-oxazol-4-yl)-6-oxo-1,6-dihydropyrimidine-4-carboxamide, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Dehghani-Tafti, S, Dong, A, Li, Y, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L.
登録日2024-01-11
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Co-crystal structure of human TREX1 in complex with an inhibitor
To be published
8V1F
DownloadVisualize
BU of 8v1f by Molmil
TMPRSS2 complexed with the noncovalent inhibitor 6-amidino-2-napthol
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Fraser, B.J, Dong, A, Kutera, M, Seitova, A, Li, Y, Hutchinson, A, Edwards, A, Benard, F, Halabelian, L, Arrowsmith, C, Structural Genomics Consortium (SGC)
登録日2023-11-20
公開日2024-02-07
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献TMPRSS2 complexed with the noncovalent inhibitor 6-amidino-2-napthol
To Be Published
8W3V
DownloadVisualize
BU of 8w3v by Molmil
Crystal structure of human WDR41
分子名称: WD repeat-containing protein 41
著者Hutchinson, A, Dong, A, Li, Y, Seitova, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-02-22
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of human WDR41
To be published
6GPD
DownloadVisualize
BU of 6gpd by Molmil
Crystal structure of the ligand-free form of domain 1 from TmArgBP
分子名称: Amino acid ABC transporter, periplasmic amino acid-binding protein,Amino acid ABC transporter, periplasmic amino acid-binding protein
著者Smaldone, G, Balasco, N, Ruggiero, A, Berisio, R, Vitagliano, L.
登録日2018-06-05
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Domain communication in Thermotoga maritima Arginine Binding Protein unraveled through protein dissection.
Int. J. Biol. Macromol., 119, 2018
9AVA
DownloadVisualize
BU of 9ava by Molmil
Co-crystal structure of human TREX1 in complex with an inhibitor
分子名称: (2R)-2-[(5R,6S,8R,9aS)-8-amino-1-oxo-5-(2-phenylethyl)hexahydro-1H-pyrrolo[1,2-a][1,4]diazepin-2(3H)-yl]-N-[(3,4-dichlorophenyl)methyl]-4-methylpentanamide, POTASSIUM ION, Three-prime repair exonuclease 1, ...
著者Dehghani-Tafti, S, Dong, A, Li, Y, Xu, J, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-03-01
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Co-crystal structure of human TREX1 in complex with an inhibitor
To be published
6GGP
DownloadVisualize
BU of 6ggp by Molmil
Structure of the ligand-free form of truncated ArgBP (residues 20-233) from T. maritima
分子名称: Amino acid ABC transporter, periplasmic amino acid-binding protein
著者Smaldone, G, Berisio, R, Balasco, N, D'Auria, S, Vitagliano, L, Ruggiero, A.
登録日2018-05-03
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Domain swapping dissection in Thermotoga maritima arginine binding protein: How structural flexibility may compensate destabilization.
Biochim. Biophys. Acta, 1866, 2018
7UFV
DownloadVisualize
BU of 7ufv by Molmil
Crystal structure of the WDR domain of human DCAF1 in complex with OICR-6766
分子名称: (3P)-N-[(1S)-3-amino-1-(3-chlorophenyl)-3-oxopropyl]-3-(2-fluorophenyl)-1H-pyrazole-4-carboxamide, DDB1- and CUL4-associated factor 1, UNKNOWN ATOM OR ION
著者Kimani, S, Li, A, Li, Y, Dong, A, Hutchinson, A, Seitova, A, Wilson, B, Al-Awar, R, Vedadi, M, Brown, P, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2022-03-23
公開日2022-05-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of Nanomolar DCAF1 Small Molecule Ligands.
J.Med.Chem., 66, 2023

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon