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6O2L
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BU of 6o2l by Molmil
NMR structure of the 2:1 complex of a carbazole derivative BMVC bound to c-MYC G-quadruplex
分子名称: 3,6-bis[(E)-2-(1-methylpyridin-1-ium-4-yl)ethenyl]-9H-carbazole, DNA (5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*AP*A)-3')
著者Lin, C, Liu, W, Yang, D.
登録日2019-02-24
公開日2019-10-23
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structures of 1:1 and 2:1 complexes of BMVC and MYC promoter G-quadruplex reveal a mechanism of ligand conformation adjustment for G4-recognition.
Nucleic Acids Res., 47, 2019
3C90
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BU of 3c90 by Molmil
The 1.25 A Resolution Structure of Phosphoribosyl-ATP Pyrophosphohydrolase from Mycobacterium tuberculosis, crystal form II
分子名称: Phosphoribosyl-ATP pyrophosphatase
著者Javid-Majd, F, Yang, D, Ioerger, T.R, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2008-02-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The 1.25 A resolution structure of phosphoribosyl-ATP pyrophosphohydrolase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 64, 2008
1X95
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BU of 1x95 by Molmil
Solution structure of the DNA-hexamer ATGCAT complexed with DNA Bis-intercalating Anticancer Drug XR5944 (MLN944)
分子名称: 1-METHYL-9-[12-(9-METHYLPHENAZIN-10-IUM-1-YL)-12-OXO-2,11-DIAZA-5,8-DIAZONIADODEC-1-ANOYL]PHENAZIN-10-IUM, 5'-D(*AP*TP*GP*CP*AP*T)-3'
著者Dai, J, Punchihewa, C, Mistry, P, Ooi, A.T, Yang, D.
登録日2004-08-19
公開日2004-09-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Novel DNA bis-intercalation by MLN944, a potent clinical bisphenazine anticancer drug.
J.Biol.Chem., 279, 2004
2PY1
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BU of 2py1 by Molmil
Solution structure of human liver fatty acid binding protein
分子名称: Fatty acid-binding protein, liver
著者Long, D, Yang, D.
登録日2007-05-15
公開日2007-06-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Rapid data collection for protein structure determination by NMR spectroscopy.
J.Am.Chem.Soc., 129, 2007
2K3N
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BU of 2k3n by Molmil
Solution structure of the type 1 repetitive domain (TUSP1-RP1) of the egg case silk from Nephila Antipodiana
分子名称: TuSp1
著者Lin, Z, Huang, W, Fan, J, Yang, D.
登録日2008-05-14
公開日2009-06-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of eggcase silk protein and its implications for silk fiber formation
Proc.Natl.Acad.Sci.USA, 106, 2009
6V0L
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BU of 6v0l by Molmil
PDGFR-b Promoter Forms a G-Vacancy Quadruplex that Can be Complemented by dGMP: Molecular Structure and Recognition of Guanine Derivatives and Metabolites
分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, DNA (5'-D(*(3D1)P*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*AP*CP*A)-3')
著者Wang, K.B, Dickerhoff, J, Wu, G, Yang, D.
登録日2019-11-18
公開日2020-03-11
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献PDGFR-beta Promoter Forms a Vacancy G-Quadruplex that Can Be Filled in by dGMP: Solution Structure and Molecular Recognition of Guanine Metabolites and Drugs.
J.Am.Chem.Soc., 142, 2020
2K3O
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BU of 2k3o by Molmil
Solution structure of the type 2 repetitive domain (TUSP1-RP2) of the egg case silk from Nephila Antipodiana
分子名称: TuSp1
著者Lin, Z, Huang, W, Fan, J, Yang, D.
登録日2008-05-14
公開日2009-06-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of eggcase silk protein and its implications for silk fiber formation
Proc.Natl.Acad.Sci.USA, 106, 2009
5H3N
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BU of 5h3n by Molmil
Solution structure of human Gelsolin protein domain 1 at pH 7.3
分子名称: Gelsolin
著者Fan, J.S, Yang, D.
登録日2016-10-26
公開日2017-11-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis for pH-mediated Regulation of F-actin Severing by Gelsolin Domain 1.
Sci Rep, 7, 2017
5H3M
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BU of 5h3m by Molmil
Solution structure of human Gelsolin protein domain 1 at pH 5.0
分子名称: Gelsolin
著者Fan, J.S, Yang, D.
登録日2016-10-26
公開日2017-11-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis for pH-mediated Regulation of F-actin Severing by Gelsolin Domain 1.
Sci Rep, 7, 2017
2LUT
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BU of 2lut by Molmil
NMR solution structure of midkine-a
分子名称: Midkine-related growth factor
著者Lim, J, Yang, D, Meng, D.
登録日2012-06-21
公開日2013-05-01
実験手法SOLUTION NMR
主引用文献Structural and Functional Characterization of Two Zebrafish Midkine Proteins Reveals Importance of the Conserved Hinge for Heparin Binding and Embryogenesis
To be Published
2ML7
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BU of 2ml7 by Molmil
Ginsentides: Characterization, Structure and Application of a New Class of Highly Stable Cystine Knot Peptides in Ginseng
分子名称: Specific abundant protein 3
著者Wang, S, Nguyen, K, Luo, S, Tam, J, Yang, D.
登録日2014-02-20
公開日2015-03-04
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ginsentides: Characterization, Structure and Application of a New Class of Highly Stable Cystine Knot Peptides in Ginseng
To be Published
2LYI
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BU of 2lyi by Molmil
Repetitive domain (RP) of aciniform spidroin 1 from Nephila antipodiana
分子名称: PROTEIN (entity)
著者Wang, S, Huang, W, Yang, D.
登録日2012-09-18
公開日2013-01-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure note: repetitive domain of aciniform spidroin 1 from Nephila antipodiana
J.Biomol.Nmr, 54, 2012
2MAB
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BU of 2mab by Molmil
Untangling the Solution Structure of C-Terminal Domain of Aciniform Spidroin
分子名称: ACINIFORM SPIDROIN
著者Wang, S, Yang, D.
登録日2013-07-09
公開日2014-03-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and function of C-terminal domain of aciniform spidroin
Biomacromolecules, 15, 2014
1XJI
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BU of 1xji by Molmil
Bacteriorhodopsin crystallized in bicelles at room temperature
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Bacteriorhodopsin, DECANE, ...
著者Faham, S, Boulting, G.L, Massey, E.A, Yohannan, S, Yang, D, Bowie, J.U.
登録日2004-09-23
公開日2005-04-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystallization of bacteriorhodopsin from bicelle formulations at room temperature
Protein Sci., 14, 2005
3SQJ
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BU of 3sqj by Molmil
Recombinant human serum albumin from transgenic plant
分子名称: MYRISTIC ACID, Serum albumin
著者He, Y, Yang, D.
登録日2011-07-05
公開日2011-11-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Large-scale production of functional human serum albumin from transgenic rice seeds.
Proc.Natl.Acad.Sci.USA, 108, 2011
2HY9
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BU of 2hy9 by Molmil
Human telomere DNA quadruplex structure in K+ solution hybrid-1 form
分子名称: DNA (26-MER)
著者Dai, J, Punchihewa, C, Jones, R.A, Hurley, L, Yang, D.
登録日2006-08-04
公開日2007-04-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the intramolecular human telomeric G-quadruplex in potassium solution: a novel adenine triple formation.
Nucleic Acids Res., 35, 2007
5V54
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BU of 5v54 by Molmil
Crystal structure of 5-HT1B receptor in complex with methiothepin
分子名称: 1-methyl-4-[(5~{S})-3-methylsulfanyl-5,6-dihydrobenzo[b][1]benzothiepin-5-yl]piperazine, 5-hydroxytryptamine receptor 1B,OB-1 fused 5-HT1b receptor,5-hydroxytryptamine receptor 1B
著者Yin, W.C, Zhou, X.E, Yang, D, de Waal, P, Wang, M.T, Dai, A, Cai, X, Huang, C.Y, Liu, P, Yin, Y, Liu, B, Caffrey, M, Melcher, K, Xu, Y, Wang, M.W, Xu, H.E, Jiang, Y.
登録日2017-03-13
公開日2018-02-07
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献A common antagonistic mechanism for class A GPCRs revealed by the structure of the human 5-HT1B serotonin receptor bound to an antagonist
Cell Discov, 2018
4L6R
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BU of 4l6r by Molmil
Structure of the class B human glucagon G protein coupled receptor
分子名称: DI(HYDROXYETHYL)ETHER, Soluble cytochrome b562 and Glucagon receptor chimera
著者Siu, F.Y, He, M, de Graaf, C, Han, G.W, Yang, D, Zhang, Z, Zhou, C, Xu, Q, Wacker, D, Joseph, J.S, Liu, W, Lau, J, Cherezov, V, Katritch, V, Wang, M.W, Stevens, R.C, GPCR Network (GPCR)
登録日2013-06-12
公開日2013-07-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the human glucagon class B G-protein-coupled receptor.
Nature, 499, 2013
2M6Z
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BU of 2m6z by Molmil
Refined solution structure of Human Adult Hemoglobin in the Carbonmonoxy Form
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Fan, J.S, Yang, D, Choy, W.Y.
登録日2013-04-15
公開日2013-09-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of human hemoglobin in the carbonmonoxy form
Biochemistry, 52, 2013
2M27
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BU of 2m27 by Molmil
Major G-quadruplex structure formed in human VEGF promoter, a monomeric parallel-stranded quadruplex
分子名称: DNA_(5'-D(*CP*GP*GP*GP*GP*CP*GP*GP*GP*CP*CP*TP*TP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')_
著者Agrawal, P, Hatzakis, E, Guo, K, Carver, M, Yang, D.
登録日2012-12-14
公開日2013-09-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the major G-quadruplex formed in the human VEGF promoter in K+: insights into loop interactions of the parallel G-quadruplexes.
Nucleic Acids Res., 41, 2013
2JPZ
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BU of 2jpz by Molmil
Human telomere DNA quadruplex structure in K+ solution hybrid-2 form
分子名称: DNA (26-MER)
著者Dai, J, Carver, M, Punchihewa, C, Jones, R, Yang, D.
登録日2007-05-25
公開日2007-12-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the Hybrid-2 type intramolecular human telomeric G-quadruplex in K+ solution: insights into structure polymorphism of the human telomeric sequence
Nucleic Acids Res., 35, 2007
2KBE
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BU of 2kbe by Molmil
solution structure of amino-terminal domain of Dbp5p
分子名称: ATP-dependent RNA helicase DBP5
著者Fan, J.S, Zhang, J, Yang, D.
登録日2008-11-27
公開日2009-10-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides.
J.Mol.Biol., 388, 2009
2KKA
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BU of 2kka by Molmil
Human telomere DNA two-tetrad quadruplex structure in K+ solution
分子名称: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*IP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'
著者Zhang, Z, Dai, J, Yang, D.
登録日2009-06-16
公開日2009-12-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures.
Nucleic Acids Res., 38, 2010
2KBF
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BU of 2kbf by Molmil
solution structure of carboxyl-terminal domain of Dbp5p
分子名称: ATP-dependent RNA helicase DBP5
著者Fan, J.S, Zhang, J, Yang, D.
登録日2008-11-28
公開日2009-10-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides.
J.Mol.Biol., 388, 2009
2H35
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BU of 2h35 by Molmil
Solution structure of Human normal adult hemoglobin
分子名称: Hemoglobin alpha subunit, Hemoglobin beta subunit, PROTOPORPHYRIN IX CONTAINING FE
著者Fan, J.S, Yang, D.
登録日2006-05-22
公開日2006-11-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A new strategy for structure determination of large proteins in solution without deuteration
Nat.Methods, 3, 2006

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