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6CET
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BU of 6cet by Molmil
Cryo-EM structure of GATOR1
分子名称: GATOR complex protein DEPDC5, GATOR complex protein NPRL2, GATOR complex protein NPRL3
著者Shen, K, Huang, R.K, Brignole, E.J, Yu, Z, Sabatini, D.M.
登録日2018-02-12
公開日2018-03-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Architecture of the human GATOR1 and GATOR1-Rag GTPases complexes.
Nature, 556, 2018
6CES
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BU of 6ces by Molmil
Cryo-EM structure of GATOR1-RAG
分子名称: GATOR complex protein DEPDC5, GATOR complex protein NPRL2, GATOR complex protein NPRL3, ...
著者Shen, K, Huang, R.K, Brignole, E.J, Yu, Z, Sabatini, D.M.
登録日2018-02-12
公開日2018-03-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Architecture of the human GATOR1 and GATOR1-Rag GTPases complexes.
Nature, 556, 2018
6D03
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BU of 6d03 by Molmil
Cryo-EM structure of a Plasmodium vivax invasion complex essential for entry into human reticulocytes; one molecule of parasite ligand.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(2-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gruszczyk, J, Huang, R.K, Hong, C, Yu, Z, Tham, W.H.
登録日2018-04-10
公開日2018-06-20
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Cryo-EM structure of an essential Plasmodium vivax invasion complex.
Nature, 559, 2018
6D05
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BU of 6d05 by Molmil
Cryo-EM structure of a Plasmodium vivax invasion complex essential for entry into human reticulocytes; two molecules of parasite ligand, subclass 2.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Gruszczyk, J, Huang, R.K, Hong, C, Yu, Z, Tham, W.H.
登録日2018-04-10
公開日2018-06-20
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of an essential Plasmodium vivax invasion complex.
Nature, 559, 2018
6D04
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BU of 6d04 by Molmil
Cryo-EM structure of a Plasmodium vivax invasion complex essential for entry into human reticulocytes; two molecules of parasite ligand, subclass 1.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Gruszczyk, J, Huang, R.K, Hong, C, Yu, Z, Tham, W.H.
登録日2018-04-10
公開日2018-06-20
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Cryo-EM structure of an essential Plasmodium vivax invasion complex.
Nature, 559, 2018
6DWB
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BU of 6dwb by Molmil
Structure of the Salmonella SPI-1 type III secretion injectisome needle filament
分子名称: Protein PrgI
著者Hu, J, Hong, C, Worrall, L.J, Vuckovic, M, Yu, Z, Strynadka, N.C.J.
登録日2018-06-26
公開日2018-10-03
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM analysis of the T3S injectisome reveals the structure of the needle and open secretin.
Nat Commun, 9, 2018
5EX7
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BU of 5ex7 by Molmil
Crystal structure of Brat NHL domain in complex with an 8-nt hunchback mRNA
分子名称: Brain tumor protein, RNA (5'-R(P*UP*UP*UP*GP*UP*UP*GP*U)-3')
著者Wang, Y, Yu, Z, Wang, M, Liu, C.P, Yang, N, Xu, R.M.
登録日2015-11-23
公開日2015-12-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Brat NHL domain in complex with an 8-nt hunchback mRNA
To Be Published
5GRR
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BU of 5grr by Molmil
Crystal structure of MCR-1
分子名称: GLYCEROL, Probable phosphatidylethanolamine transferase Mcr-1, ZINC ION
著者Ma, G, Zhu, Y, Yu, Z, Zhang, H.
登録日2016-08-12
公開日2017-01-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献High resolution crystal structure of the catalytic domain of MCR-1
Sci Rep, 6, 2016
7XOG
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BU of 7xog by Molmil
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,peptide, ...
著者Wu, Z, Yu, Z, Tan, S, Lu, J, Lu, G, Lin, J.
登録日2022-05-01
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Preclinical evaluation of RQ3013, a broad-spectrum mRNA vaccine against SARS-CoV-2 variants.
Sci Bull (Beijing), 68, 2023
7XOE
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BU of 7xoe by Molmil
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,peptide
著者Wu, Z, Yu, Z, Tan, S, Lu, J, Lu, G, Lin, J.
登録日2022-05-01
公開日2024-02-14
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Preclinical evaluation of RQ3013, a broad-spectrum mRNA vaccine against SARS-CoV-2 variants.
Sci Bull (Beijing), 68, 2023
4PKM
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BU of 4pkm by Molmil
Crystal Structure of Bacillus thuringiensis Cry51Aa1 Protoxin at 1.65 Angstroms Resolution
分子名称: Cry51Aa1, GLYCEROL, GLYCINE, ...
著者Xu, C, Chinte, U, Chen, L, Yao, Q, Zhou, D, Meng, Y, Li, L, Rose, J, Bi, L.J, Yu, Z, Sun, M, Wang, B.C.
登録日2014-05-15
公開日2015-06-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of Cry51Aa1: A potential novel insecticidal aerolysin-type beta-pore-forming toxin from Bacillus thuringiensis.
Biochem.Biophys.Res.Commun., 462, 2015
4PVG
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BU of 4pvg by Molmil
Crystal structure of protein tyrosine phosphatase Shp2 catalytic domain complex with small molecular compound L88N79
分子名称: 2-[3-({4-[(1,3-benzodioxol-5-ylmethyl)amino]-4-oxobutanoyl}amino)phenyl]-6-hydroxy-3-iodo-1-methyl-1H-indole-5-carboxylic acid, Tyrosine-protein phosphatase non-receptor type 11
著者Zhang, Z.-Y, Zeng, L, Liu, D, Yu, Z.
登録日2014-03-17
公開日2015-04-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of protein tyrosine Shp2 catalytic domain complex with compound L88N79
To be Published
5WC3
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BU of 5wc3 by Molmil
SpoIIIAG
分子名称: SpoIIIAG, Stage III sporulation engulfment assemblyprotein
著者Zeytuni, N, Hong, C, Worrall, L.J, Huang, R.K, Yu, Z, Strynadka, N.C.J.
登録日2017-06-29
公開日2017-08-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Near-atomic resolution cryoelectron microscopy structure of the 30-fold homooligomeric SpoIIIAG channel essential to spore formation in Bacillus subtilis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8HMB
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BU of 8hmb by Molmil
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with benidipine (BEN)
分子名称: (3R)-1-benzylpiperidin-3-yl methyl (2R,3R,4R,5R,6S)-2,6-dimethyl-4-(3-nitrophenyl)piperidine-3,5-dicarboxylate, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wei, Y, Yu, Z, Zhao, Y.
登録日2022-12-02
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural bases of inhibitory mechanism of Ca V 1.2 channel inhibitors.
Nat Commun, 15, 2024
8HMA
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BU of 8hma by Molmil
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with tetrandrine (TET)
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6,6',7,12-tetramethoxy-2,2'-dimethyl-1beta-3,4-didehydroberbaman, ...
著者Wei, Y, Yu, Z, Zhao, Y.
登録日2022-12-02
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural bases of inhibitory mechanism of Ca V 1.2 channel inhibitors.
Nat Commun, 15, 2024
8HLP
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BU of 8hlp by Molmil
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 (apo)
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Wei, Y, Yu, Z, Zhao, Y.
登録日2022-11-30
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural bases of inhibitory mechanism of Ca V 1.2 channel inhibitors.
Nat Commun, 15, 2024
7E9F
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BU of 7e9f by Molmil
Cryo-EM structure of the 2:1 Orc1 BAH domain in complex with nucleosome
分子名称: DNA (147-mer), Histone H2A.2, Histone H2B.2, ...
著者Jiang, H, Yu, C, Liu, C.P, Han, X, Yu, Z, Xu, R.M.
登録日2021-03-04
公開日2022-09-07
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Nucleosome binding relinquishes the association of the BAH domain of Orc1 with Sir1
To Be Published
7E9C
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BU of 7e9c by Molmil
Cryo-EM structure of the 1:1 Orc1 BAH domain in complex with nucleosome
分子名称: DNA (147-mer), Histone H2A.2, Histone H2B.2, ...
著者Jiang, H, Yu, C, Liu, C.P, Han, X, Yu, Z, Xu, R.M.
登録日2021-03-04
公開日2022-09-07
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Nucleosome binding relinquishes the association of the BAH domain of Orc1 with Sir1
To Be Published
7Y8R
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BU of 7y8r by Molmil
The nucleosome-bound human PBAF complex
分子名称: ACTB protein (Fragment), ADENOSINE-5'-DIPHOSPHATE, AT-rich interactive domain-containing protein 2, ...
著者Wang, L, Yu, J, Yu, Z, Wang, Q, He, S, Xu, Y.
登録日2022-06-24
公開日2022-12-07
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structure of nucleosome-bound human PBAF complex.
Nat Commun, 13, 2022
7UBO
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BU of 7ubo by Molmil
Crystal Structure of the first bromodomain of human BRDT in complex with the inhibitor CCD-956
分子名称: Bromodomain testis-specific protein, DIMETHYL SULFOXIDE, N-[(2R)-1-(methylamino)-3-{1-[(4-methyl-2-oxo-1,2-dihydroquinolin-6-yl)acetyl]piperidin-4-yl}-1-oxopropan-2-yl]-5-phenylpyridine-2-carboxamide
著者Ta, H.M, Modukuri, R.K, Yu, Z, Tan, Z, Matzuk, M.M, Kim, C.
登録日2022-03-15
公開日2022-06-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Discovery of potent BET bromodomain 1 stereoselective inhibitors using DNA-encoded chemical library selections.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WLI
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BU of 7wli by Molmil
CryoEM structure of human low-voltage activated T-type calcium channel CaV3.3 (apo)
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者He, L, Yu, Z, Dong, Y, Chen, Q, Zhao, Y.
登録日2022-01-13
公開日2022-05-04
最終更新日2022-05-25
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure, gating, and pharmacology of human Ca V 3.3 channel.
Nat Commun, 13, 2022
7WLK
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CryoEM structure of human low-voltage activated T-type calcium channel Cav3.3 in complex with Otilonium Bromide(OB)
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-[diethyl(methyl)-$l^{4}-azanyl]ethyl 4-[(2-octoxyphenyl)carbonylamino]benzoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者He, L, Yu, Z, Dong, Y, Chen, Q, Zhao, Y.
登録日2022-01-13
公開日2022-05-04
最終更新日2022-05-25
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure, gating, and pharmacology of human Ca V 3.3 channel.
Nat Commun, 13, 2022
7WLJ
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CryoEM structure of human low-voltage activated T-type calcium channel Cav3.3 in complex with mibefradil (MIB)
分子名称: (1S,2S)-2-(2-{[3-(1H-benzimidazol-2-yl)propyl](methyl)amino}ethyl)-6-fluoro-1-(propan-2-yl)-1,2,3,4-tetrahydronaphthalen-2-yl methoxyacetate, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者He, L, Yu, Z, Dong, Y, Chen, Q, Zhao, Y.
登録日2022-01-13
公開日2022-05-04
最終更新日2022-05-25
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure, gating, and pharmacology of human Ca V 3.3 channel.
Nat Commun, 13, 2022
7WLL
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CryoEM structure of human low-voltage activated T-type calcium channel Cav3.3 in complex with pimozide(PMZ)
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[1-[4,4-bis(4-fluorophenyl)butyl]piperidin-4-yl]-1~{H}-benzimidazol-2-one, ...
著者He, L, Yu, Z, Dong, Y, Chen, Q, Zhao, Y.
登録日2022-01-13
公開日2022-05-04
最終更新日2022-05-25
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure, gating, and pharmacology of human Ca V 3.3 channel.
Nat Commun, 13, 2022
6K9L
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4.27 Angstrom resolution cryo-EM structure of human dimeric ATM kinase
分子名称: Serine-protein kinase ATM
著者Xiao, J, Liu, M, Qi, Y, Chaban, Y, Gao, C, Tian, Y, Yu, Z, Li, J, Zhang, P, Xu, Y.
登録日2019-06-16
公開日2019-12-25
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Structural insights into the activation of ATM kinase.
Cell Res., 29, 2019

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