Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4Z6S
DownloadVisualize
BU of 4z6s by Molmil
Structure of H200Q variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-sulfonyl catechol at 1.42 Ang resolution
分子名称: 3,4-dihydroxybenzenesulfonic acid, CALCIUM ION, CHLORIDE ION, ...
著者Kovaleva, E.G, Lipscomb, J.D.
登録日2015-04-06
公開日2015-08-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
4Z6U
DownloadVisualize
BU of 4z6u by Molmil
Structure of H200E variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-nitrocatechol at 1.48 Ang resolution
分子名称: 4-NITROCATECHOL, CALCIUM ION, CHLORIDE ION, ...
著者Kovaleva, E.G, Lipscomb, J.D.
登録日2015-04-06
公開日2015-08-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
4Z6W
DownloadVisualize
BU of 4z6w by Molmil
Structure of H200N variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-nitrocatechol at 1.57 Ang resolution
分子名称: 4-NITROCATECHOL, CALCIUM ION, CHLORIDE ION, ...
著者Kovaleva, E.G, Lipscomb, J.D.
登録日2015-04-06
公開日2015-08-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
4Z6P
DownloadVisualize
BU of 4z6p by Molmil
Structure of H200Q variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with HPCA at 1.75 Ang resolution
分子名称: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, CHLORIDE ION, FE (II) ION, ...
著者Kovaleva, E.G, Lipscomb, J.D.
登録日2015-04-06
公開日2015-08-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
5BWG
DownloadVisualize
BU of 5bwg by Molmil
Structure of H200C variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum at 1.75 Ang resolution
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Kovaleva, E.G, Lipscomb, J.D.
登録日2015-06-08
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A Long-Lived Fe(III)-(Hydroperoxo) Intermediate in the Active H200C Variant of Homoprotocatechuate 2,3-Dioxygenase: Characterization by Mossbauer, Electron Paramagnetic Resonance, and Density Functional Theory Methods.
Inorg.Chem., 54, 2015
5BWH
DownloadVisualize
BU of 5bwh by Molmil
Structure of H200C variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with HPCA at 1.46 Ang resolution
分子名称: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Kovaleva, E.G, Lipscomb, J.D.
登録日2015-06-08
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献A Long-Lived Fe(III)-(Hydroperoxo) Intermediate in the Active H200C Variant of Homoprotocatechuate 2,3-Dioxygenase: Characterization by Mossbauer, Electron Paramagnetic Resonance, and Density Functional Theory Methods.
Inorg.Chem., 54, 2015
1Q0C
DownloadVisualize
BU of 1q0c by Molmil
Anerobic Substrate Complex of Homoprotocatechuate 2,3-Dioxygenase from Brevibacterium fuscum. (Complex with 3,4-Dihydroxyphenylacetate)
分子名称: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, FE (III) ION, homoprotocatechuate 2,3-dioxygenase
著者Vetting, M.W, Wackett, L.P, Que, L, Lipscomb, J.D, Ohlendorf, D.H.
登録日2003-07-15
公開日2003-07-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
1Q0O
DownloadVisualize
BU of 1q0o by Molmil
CRYSTAL STRUCTURE OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM BREVIBACTERIUM FUSCUM (FULL LENGTH PROTEIN)
分子名称: FE (III) ION, homoprotocatechuate 2,3-dioxygenase
著者Vetting, M.W, Wackett, L.P, Que, L, Lipscomb, J.D, Ohlendorf, D.H.
登録日2003-07-16
公開日2003-07-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
1F1R
DownloadVisualize
BU of 1f1r by Molmil
CRYSTAL STRUCTURE OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM ARTHROBACTER GLOBIFORMIS (NATIVE, NON-CRYO)
分子名称: HOMOPROTOCATECHUATE 2,3-DIOXYGENASE, MANGANESE (II) ION
著者Vetting, M.W, Lipscomb, J.D, Wackett, L.P, Que Jr, L, Ohlendorf, D.H.
登録日2000-05-19
公開日2003-06-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
1F1V
DownloadVisualize
BU of 1f1v by Molmil
ANAEROBIC SUBSTRATE COMPLEX OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM ARTHROBACTER GLOBIFORMIS. (COMPLEX WITH 3,4-DIHYDROXYPHENYLACETATE)
分子名称: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, HOMOPROTOCATECHUATE 2,3-DIOXYGENASE, MANGANESE (II) ION
著者Vetting, M.W, Lipscomb, J.D, Wackett, L.P, Que Jr, L, Ohlendorf, D.H.
登録日2000-05-20
公開日2003-06-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
1F1U
DownloadVisualize
BU of 1f1u by Molmil
CRYSTAL STRUCTURE OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM ARTHROBACTER GLOBIFORMIS (NATIVE, LOW TEMPERATURE)
分子名称: HOMOPROTOCATECHUATE 2,3-DIOXYGENASE, MANGANESE (II) ION
著者Vetting, M.W, Lipscomb, J.D, Wackett, L.P, Que Jr, L, Ohlendorf, D.H.
登録日2000-05-19
公開日2003-06-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
7Q2U
DownloadVisualize
BU of 7q2u by Molmil
The crystal structure of the HINT1 Q62A mutant.
分子名称: CACODYLATE ION, HEXAETHYLENE GLYCOL, Histidine triad nucleotide-binding protein 1, ...
著者Dolot, R.M, Strom, A.M, Wagner, C.R.
登録日2021-10-26
公開日2021-11-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Dynamic Long-Range Interactions Influence Substrate Binding and Catalysis by Human Histidine Triad Nucleotide-Binding Proteins (HINTs), Key Regulators of Multiple Cellular Processes and Activators of Antiviral ProTides.
Biochemistry, 61, 2022
5MND
DownloadVisualize
BU of 5mnd by Molmil
SFX structure of Cydia pomonella granulovirus using a double flow-focusing nozzle
分子名称: Granulin
著者Oberthuer, D, Chapman, H, Doerner, K, Xavier, P.L.
登録日2016-12-13
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Double-flow focused liquid injector for efficient serial femtosecond crystallography.
Sci Rep, 7, 2017
6YD0
DownloadVisualize
BU of 6yd0 by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, diferric state
分子名称: FE (III) ION, GLYCEROL, Methane monooxygenase, ...
著者Srinivas, V, Hogbom, M.
登録日2020-03-19
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
6YDU
DownloadVisualize
BU of 6ydu by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, reoxidized diferric state, 10s O2 exposure.
分子名称: FE (III) ION, GLYCEROL, Methane monooxygenase, ...
著者Srinivas, V, Hogbom, M.
登録日2020-03-21
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
5G5J
DownloadVisualize
BU of 5g5j by Molmil
Crystal structure of human CYP3A4 bound to metformin
分子名称: CYTOCHROME P450 3A4, Metformin, PROTOPORPHYRIN IX CONTAINING FE
著者Sevrioukova, I.
登録日2016-05-25
公開日2017-06-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Heme Binding Biguanides Target Cytochrome P450-Dependent Cancer Cell Mitochondria.
Cell Chem Biol, 24, 2017
6YDI
DownloadVisualize
BU of 6ydi by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, diferrous state
分子名称: FE (II) ION, GLYCEROL, Methane monooxygenase, ...
著者Srinivas, V, Hogbom, M.
登録日2020-03-20
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
6YY3
DownloadVisualize
BU of 6yy3 by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, t=0 diferrous state prior to oxygen activation
分子名称: FE (II) ION, GLYCEROL, Methane monooxygenase, ...
著者Srinivas, V, Hogbom, M.
登録日2020-05-04
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
5TE2
DownloadVisualize
BU of 5te2 by Molmil
Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with a mechanism-based inhibitor
分子名称: 1,2-ETHANEDIOL, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, DI(HYDROXYETHYL)ETHER, ...
著者Maize, K.M, Eiden, C, Aldrich, C.C, Finzel, B.C.
登録日2016-09-20
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Rational Optimization of Mechanism-Based Inhibitors through Determination of the Microscopic Rate Constants of Inactivation.
J. Am. Chem. Soc., 139, 2017
5U5Q
DownloadVisualize
BU of 5u5q by Molmil
12 Subunit RNA Polymerase II at Room Temperature collected using SFX
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Bushnell, D.A, Oberthur, D, Mariani, V, Yefanov, O, Tolstikova, A, Barty, A.
登録日2016-12-07
公開日2017-03-29
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Double-flow focused liquid injector for efficient serial femtosecond crystallography.
Sci Rep, 7, 2017
5TRX
DownloadVisualize
BU of 5trx by Molmil
Room temperature structure of an extradiol ring-cleaving dioxygenase from B.fuscum determined using serial femtosecond crystallography
分子名称: CALCIUM ION, CHLORIDE ION, FE (II) ION, ...
著者Kovaleva, E.G, Oberthuer, D, Tolstikova, A, Mariani, V.
登録日2016-10-27
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Double-flow focused liquid injector for efficient serial femtosecond crystallography
Sci. Rep., 7, 2017
3V5Z
DownloadVisualize
BU of 3v5z by Molmil
Structure of FBXL5 hemerythrin domain, C2 cell, grown anaerobically
分子名称: F-box/LRR-repeat protein 5, MU-OXO-DIIRON
著者Tomchick, D.R, Bruick, R.K, Thompson, J.W, Brautigam, C.A.
登録日2011-12-17
公開日2012-01-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1847 Å)
主引用文献Structural and Molecular Characterization of Iron-sensing Hemerythrin-like Domain within F-box and Leucine-rich Repeat Protein 5 (FBXL5).
J.Biol.Chem., 287, 2012
3V5Y
DownloadVisualize
BU of 3v5y by Molmil
Structure of FBXL5 hemerythrin domain, P2(1) cell
分子名称: F-box/LRR-repeat protein 5, MU-OXO-DIIRON
著者Tomchick, D.R, Bruick, R.K, Thompson, J.W, Brautigam, C.A.
登録日2011-12-17
公開日2012-01-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Molecular Characterization of Iron-sensing Hemerythrin-like Domain within F-box and Leucine-rich Repeat Protein 5 (FBXL5).
J.Biol.Chem., 287, 2012
3V5X
DownloadVisualize
BU of 3v5x by Molmil
Structure of FBXL5 hemerythrin domain, C2 cell
分子名称: F-box/LRR-repeat protein 5, MU-OXO-DIIRON
著者Tomchick, D.R, Bruick, R.K, Thompson, J.W, Brautigam, C.A.
登録日2011-12-17
公開日2012-01-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and Molecular Characterization of Iron-sensing Hemerythrin-like Domain within F-box and Leucine-rich Repeat Protein 5 (FBXL5).
J.Biol.Chem., 287, 2012
4E37
DownloadVisualize
BU of 4e37 by Molmil
Crystal Structure of P. aeruginosa catalase, KatA tetramer
分子名称: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
著者VanderWielen, B.D, Wilson, J.J, Kovall, R.A.
登録日2012-03-09
公開日2013-03-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献KatA, the Major Catalase in Pseudomonas aeruginosa, Assists in Protecting Anaerobic Bacteria From Metabolic and Exogenous Nitric Oxide
To be Published

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon