Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6K4S
DownloadVisualize
BU of 6k4s by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (TGC PAM)
分子名称: CRISPR-associated endonuclease Cas9/Csn1, non-targeted DNA, sgRNA, ...
著者Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
登録日2019-05-26
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
6IUG
DownloadVisualize
BU of 6iug by Molmil
Cryo-EM structure of the plant actin filaments from Zea mays pollen
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, pollen F-actin
著者Ren, Z.H, Zhang, Y, Zhang, Y, He, Y.Q, Du, P.Z, Wang, Z.X, Sun, F, Ren, H.Y.
登録日2018-11-28
公開日2019-11-06
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM Structure of Actin Filaments fromZea maysPollen.
Plant Cell, 31, 2019
6K57
DownloadVisualize
BU of 6k57 by Molmil
Crystal structure of dCas9 in complex with sgRNA and DNA (CGA PAM)
分子名称: CRISPR-associated endonuclease Cas9, non-target DNA, sgRNA, ...
著者Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
登録日2019-05-28
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
6K4Q
DownloadVisualize
BU of 6k4q by Molmil
Crystal structure of xCas9 in complex with sgRNA and DNA (CGG PAM)
分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA (28-MER), DNA (5'-D(*AP*AP*AP*CP*GP*GP*TP*AP*TP*TP*G)-3'), ...
著者Chen, W, Zhang, H, Zhang, Y, Wang, Y, Gan, J, Ji, Q.
登録日2019-05-26
公開日2019-09-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease.
Plos Biol., 17, 2019
6K61
DownloadVisualize
BU of 6k61 by Molmil
Cryo-EM structure of the tetrameric photosystem I from a heterocyst-forming cyanobacterium Anabaena sp. PCC7120
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Zheng, L, Li, Y, Li, X, Zhong, Q, Li, N, Zhang, K, Zhang, Y, Chu, H, Ma, C, Li, G, Zhao, J, Gao, N.
登録日2019-05-31
公開日2019-10-09
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献Structural and functional insights into the tetrameric photosystem I from heterocyst-forming cyanobacteria.
Nat.Plants, 5, 2019
6LON
DownloadVisualize
BU of 6lon by Molmil
Crystal structure of HPSG
分子名称: (2~{S})-2,3-bis(oxidanyl)propane-1-sulfonic acid, GLYCEROL, PFL2/glycerol dehydratase family glycyl radical enzyme, ...
著者Liu, J, Zhang, Y, Yuchi, Z.
登録日2020-01-06
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Two radical-dependent mechanisms for anaerobic degradation of the globally abundant organosulfur compound dihydroxypropanesulfonate.
Proc.Natl.Acad.Sci.USA, 117, 2020
5XYU
DownloadVisualize
BU of 5xyu by Molmil
Small subunit of Mycobacterium smegmatis ribosome
分子名称: 16S RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Li, Z, Zhang, Y, Zheng, L, Ge, X, Sanyal, S, Gao, N.
登録日2017-07-10
公開日2017-09-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers.
Protein Cell, 9, 2018
5XYM
DownloadVisualize
BU of 5xym by Molmil
Large subunit of Mycobacterium smegmatis
分子名称: 23S RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Li, Z, Ge, X, Zhang, Y, Zheng, L, Sanyal, S, Gao, N.
登録日2017-07-09
公開日2017-09-27
最終更新日2018-04-11
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers.
Protein Cell, 9, 2018
5YIU
DownloadVisualize
BU of 5yiu by Molmil
Caulobacter crescentus GcrA DNA-binding domain (DBD)
分子名称: Cell cycle regulatory protein GcrA
著者Wu, X, Zhang, Y.
登録日2017-10-06
公開日2018-03-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018
5YIW
DownloadVisualize
BU of 5yiw by Molmil
Caulobacter crescentus GcrA DNA-binding domain (DBD) in complex with methylated dsDNA (crystal form 2)
分子名称: (R,R)-2,3-BUTANEDIOL, Cell cycle regulatory protein GcrA, DNA (5'-D(*CP*CP*CP*TP*GP*(6MA)P*TP*TP*CP*GP*C)-3'), ...
著者Wu, X, Zhang, Y.
登録日2017-10-06
公開日2018-03-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018
5YIV
DownloadVisualize
BU of 5yiv by Molmil
Caulobacter crescentus GcrA DNA-binding domain(DBD) in complex with methylated dsDNA(crystal form 1)
分子名称: Cell cycle regulatory protein GcrA, DNA (5'-D(*CP*CP*GP*(6MA)P*AP*TP*CP*AP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*(6MA)P*TP*TP*CP*G)-3')
著者Wu, X, Zhang, Y.
登録日2017-10-06
公開日2018-03-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.914 Å)
主引用文献Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018
8HDZ
DownloadVisualize
BU of 8hdz by Molmil
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex in an apo form
分子名称: A22 DNA replication processivity factor, E4 uracil-DNA glycosylase, F8 DNA polymerase
著者Xu, Y, Wu, Y, Zhang, Y, Fan, R, Yang, Y, Li, D, Yang, B, Zhang, Z, Dong, C.
登録日2022-11-07
公開日2023-11-15
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Cryo-EM structures of human monkeypox viral replication complexes with and without DNA duplex.
Cell Res., 33, 2023
8HOY
DownloadVisualize
BU of 8hoy by Molmil
Cryo-EM structure of monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex without DNA at 2.76 angostram
分子名称: DNA polymerase, DNA polymerase processivity factor component A20, E4R
著者Xu, Y, Wu, Y, Zhang, Y, Fan, R, Yang, Y, Li, D, Yang, B, Zhang, Z, Dong, C.
登録日2022-12-11
公開日2023-12-13
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Cryo-EM structures of human monkeypox viral replication complexes with and without DNA duplex.
Cell Res., 33, 2023
5YST
DownloadVisualize
BU of 5yst by Molmil
RanM189D in complex with RanBP1-CRM1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Exportin-1,Exportin-1, ...
著者Sun, Q, Zhang, Y.
登録日2017-11-15
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献RanM189D in complex with RanBP1-CRM1
To Be Published
8HPA
DownloadVisualize
BU of 8hpa by Molmil
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex in a DNA binding form
分子名称: DNA (5'-D(*CP*GP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*TP*AP*C)-3'), DNA (5'-D(P*AP*TP*GP*GP*TP*AP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*CP*G)-3'), DNA polymerase, ...
著者Xu, Y, Wu, Y, Zhang, Y, Fan, R, Yang, Y, Li, D, Yang, B, Zhang, Z, Dong, C.
登録日2022-12-12
公開日2024-01-31
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Cryo-EM structures of human monkeypox viral replication complexes with and without DNA duplex.
Cell Res., 33, 2023
5YSU
DownloadVisualize
BU of 5ysu by Molmil
Plumbagin in complex with CRM1-RanM189D-RanBP1
分子名称: (2~{R})-2-methyl-5-oxidanyl-2,3-dihydronaphthalene-1,4-dione, CHLORIDE ION, Exportin-1,Exportin-1, ...
著者Sun, Q, Zhang, Y.
登録日2017-11-15
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献RanL182A in complex with RanBP1-CRM1
To Be Published
5YIX
DownloadVisualize
BU of 5yix by Molmil
Caulobacter crescentus GcrA sigma-interacting domain (SID) in complex with domain 2 of sigma 70
分子名称: (R,R)-2,3-BUTANEDIOL, Cell cycle regulatory protein GcrA, RNA polymerase sigma factor RpoD, ...
著者Wu, X, Zhang, Y.
登録日2017-10-06
公開日2018-03-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018
5YRO
DownloadVisualize
BU of 5yro by Molmil
RanL182A in complex with RanBP1-CRM1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Exportin-1,Exportin-1, ...
著者Sun, Q, Zhang, Y.
登録日2017-11-09
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献RanL182A in complex with RanBP1-CRM1
To Be Published
5YTB
DownloadVisualize
BU of 5ytb by Molmil
RanY197A in complex with RanBP1-CRM1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Sun, Q, Zhang, Y.
登録日2017-11-17
公開日2018-11-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献RanY197A in complex with RanBP1-CRM1
To Be Published
5Z7I
DownloadVisualize
BU of 5z7i by Molmil
Caulobacter crescentus GcrA DNA-binding domain(DBD)in complex with unmethylated dsDNA
分子名称: (R,R)-2,3-BUTANEDIOL, Cell cycle regulatory protein GcrA, DNA (5'-D(*CP*CP*CP*TP*GP*AP*TP*TP*CP*GP*C*)-3'), ...
著者Wu, X, Zhang, Y.
登録日2018-01-29
公開日2018-03-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA.
Nucleic Acids Res., 46, 2018
5ZX3
DownloadVisualize
BU of 5zx3 by Molmil
Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Li, L, Zhang, Y.
登録日2018-05-17
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.751 Å)
主引用文献Structural basis for transcription initiation by bacterial ECF sigma factors.
Nat Commun, 10, 2019
5ZX2
DownloadVisualize
BU of 5zx2 by Molmil
Mycobacterium tuberculosis RNA polymerase transcription initiation complex with ECF sigma factor sigma H and 7nt RNA
分子名称: DNA (47-MER), DNA (48-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Li, L, Zhang, Y.
登録日2018-05-17
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for transcription initiation by bacterial ECF sigma factors.
Nat Commun, 10, 2019
7V9G
DownloadVisualize
BU of 7v9g by Molmil
Native BEN4 domain of protein Bend3 with DNA
分子名称: BEN domain-containing protein 3, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*TP*GP*C)-3')
著者Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
登録日2021-08-25
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9I
DownloadVisualize
BU of 7v9i by Molmil
The Monomer mutant of BEN4 domain of protein Bend3 with DNA
分子名称: BEN domain-containing protein 3, DNA (5'-D(*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*T)-3')
著者Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
登録日2021-08-25
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9H
DownloadVisualize
BU of 7v9h by Molmil
The BEN3 domain of protein Bend3
分子名称: BEN domain-containing protein 3
著者Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
登録日2021-08-25
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.692 Å)
主引用文献Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon