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6YPF
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BU of 6ypf by Molmil
NUDIX1 hydrolase from Rosa x hybrida in complex with geranyl pyrophosphate
分子名称: GERANYL DIPHOSPHATE, Geranyl diphosphate phosphohydrolase
著者Degut, C, Rety, S, Tisne, C, Baudino, S.
登録日2020-04-16
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Functional diversification in the Nudix hydrolase gene family drives sesquiterpene biosynthesis in Rosa × wichurana.
Plant J., 104, 2020
5ZUG
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BU of 5zug by Molmil
Structure of the bacterial acetate channel SatP
分子名称: Succinate-acetate/proton symporter SatP, nonyl beta-D-glucopyranoside
著者Sun, P.C, Li, J.L, Xiao, Q.J, Guan, Z.Y, Deng, D.
登録日2018-05-07
公開日2018-11-21
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Crystal structure of the bacterial acetate transporter SatP reveals that it forms a hexameric channel.
J. Biol. Chem., 293, 2018
7CE3
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BU of 7ce3 by Molmil
Crystal structure of human IDH3 holoenzyme in APO form.
分子名称: Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, Isocitrate dehydrogenase [NAD] subunit beta, ...
著者Sun, P.K, Ding, J.P.
登録日2020-06-21
公開日2021-01-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.472 Å)
主引用文献Structure and allosteric regulation of human NAD-dependent isocitrate dehydrogenase.
Cell Discov, 6, 2020
7W07
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BU of 7w07 by Molmil
Itaconate inducible LysR-Type Transcriptional regulator (ITCR) in complex with itaconate, Space group C121.
分子名称: 2-methylidenebutanedioic acid, SULFATE ION, Transcriptional regulator, ...
著者Sun, P.K, Wang, B, Li, X.J.
登録日2021-11-17
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献A genetically encoded fluorescent biosensor for detecting itaconate with subcellular resolution in living macrophages.
Nat Commun, 13, 2022
7W08
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BU of 7w08 by Molmil
Itaconate inducible LysR-Type Transcriptional regulator (ITCR) in APO form, Space group P1.
分子名称: Transcriptional regulator, LysR family
著者Sun, P.K, Wang, B, Li, X.J.
登録日2021-11-17
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献A genetically encoded fluorescent biosensor for detecting itaconate with subcellular resolution in living macrophages.
Nat Commun, 13, 2022
7W06
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BU of 7w06 by Molmil
Itaconate inducible LysR-Type Transcriptional regulator (ITCR) in complex with itaconate (SeMet labeled), Space group C121.
分子名称: 2-methylidenebutanedioic acid, CHLORIDE ION, SULFATE ION, ...
著者Sun, P.K, Wang, B, Wang, Z.X, Qi, S, Li, X.J.
登録日2021-11-17
公開日2022-10-26
最終更新日2022-11-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A genetically encoded fluorescent biosensor for detecting itaconate with subcellular resolution in living macrophages.
Nat Commun, 13, 2022
3MMG
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BU of 3mmg by Molmil
Crystal structure of tobacco vein mottling virus protease
分子名称: FORMIC ACID, Nuclear inclusion protein A, Nuclear inclusion protein B fragment
著者Ping, S, Austin, B.P, Tozser, J, Waugh, D.S.
登録日2010-04-19
公開日2010-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural determinants of tobacco vein mottling virus protease substrate specificity.
Protein Sci., 19, 2010
7D3M
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BU of 7d3m by Molmil
FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY R50
分子名称: O/TIBET/99 VP1, O/TIBET/99 VP2, O/TIBET/99 VP3, ...
著者He, Y, Lou, Z.
登録日2020-09-19
公開日2021-04-14
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (3.94 Å)
主引用文献Structures of Foot-and-mouth Disease Virus with neutralizing antibodies derived from recovered natural host reveal a mechanism for cross-serotype neutralization.
Plos Pathog., 17, 2021
7D3K
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BU of 7d3k by Molmil
FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY B77
分子名称: B77 VH, B77 VL, O/TIBET/99 VP1, ...
著者He, Y, Lou, Z.
登録日2020-09-19
公開日2021-04-14
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structures of Foot-and-mouth Disease Virus with neutralizing antibodies derived from recovered natural host reveal a mechanism for cross-serotype neutralization.
Plos Pathog., 17, 2021
7D3R
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BU of 7d3r by Molmil
FOOT AND MOUTH DISEASE VIRUS A/WH/CHA/09-BOUND THE SINGLE CHAIN FRAGME ANTIBODY R50
分子名称: A/WH/CHA/09 VP1, A/WH/CHA/09 VP2, A/WH/CHA/09 VP3, ...
著者He, Y, Lou, Z.
登録日2020-09-20
公開日2021-04-14
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Structures of Foot-and-mouth Disease Virus with neutralizing antibodies derived from recovered natural host reveal a mechanism for cross-serotype neutralization.
Plos Pathog., 17, 2021
7D3L
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BU of 7d3l by Molmil
FOOT AND MOUTH DISEASE VIRUS O/TIBET/99-BOUND THE SINGLE CHAIN FRAGMEN ANTIBODY F145
分子名称: F145 VH, F145 VL, O/TIBET/99 VP1, ...
著者He, Y, Lou, Z.
登録日2020-09-19
公開日2021-04-14
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Structures of Foot-and-mouth Disease Virus with neutralizing antibodies derived from recovered natural host reveal a mechanism for cross-serotype neutralization.
Plos Pathog., 17, 2021
8DT3
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BU of 8dt3 by Molmil
Cryo-EM structure of spike binding to Fab of neutralizing antibody (locally refined)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain Fab of SW186, Light chain Fab of SW186, ...
著者Sun, P.C, Fang, Y, Bai, X.C, Chen, Z.J.
登録日2022-07-25
公開日2022-08-03
最終更新日2022-11-09
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献An antibody that neutralizes SARS-CoV-1 and SARS-CoV-2 by binding to a conserved spike epitope outside the receptor binding motif.
Sci Immunol, 7, 2022
4Y2I
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BU of 4y2i by Molmil
Gold ion bound to GolB
分子名称: GOLD ION, Putative metal-binding transport protein
著者Wei, W, Wang, F, Ma, L, Zhao, J.
登録日2015-02-10
公開日2016-02-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Insights and the Surprisingly Low Mechanical Stability of the Au-S Bond in the Gold-Specific Protein GolB
J.Am.Chem.Soc., 137, 2015
4Y2K
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BU of 4y2k by Molmil
reduced form of apo-GolB
分子名称: Putative metal-binding transport protein
著者Wei, W, Wang, F, Ma, L, Zhao, J.
登録日2015-02-10
公開日2016-02-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Insights and the Surprisingly Low Mechanical Stability of the Au-S Bond in the Gold-Specific Protein GolB
J.Am.Chem.Soc., 137, 2015
4Y2M
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BU of 4y2m by Molmil
apo-GolB protein
分子名称: GOLD ION, Putative metal-binding transport protein
著者Wei, W, Zhao, J, Wang, F.
登録日2015-02-10
公開日2016-02-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Insights and the Surprisingly Low Mechanical Stability of the Au-S Bond in the Gold-Specific Protein GolB
J.Am.Chem.Soc., 137, 2015
6LIX
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BU of 6lix by Molmil
CRL Protein of Arabidopsis
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Chromophore lyase CRL, chloroplastic
著者Wang, F.F, Guan, K.L, Sun, P.K, Xing, W.M.
登録日2019-12-13
公開日2020-09-16
最終更新日2020-12-02
実験手法X-RAY DIFFRACTION (2.385 Å)
主引用文献The Arabidopsis CRUMPLED LEAF protein, a homolog of the cyanobacterial bilin lyase, retains the bilin-binding pocket for a yet unknown function.
Plant J., 104, 2020
6LIY
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BU of 6liy by Molmil
SeMet CRL Protein of Arabidopsis
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Chromophore lyase CRL, chloroplastic
著者Wang, F.F, Guan, K.L, Sun, P.K, Xing, W.M.
登録日2019-12-13
公開日2020-09-16
最終更新日2020-12-02
実験手法X-RAY DIFFRACTION (1.761 Å)
主引用文献The Arabidopsis CRUMPLED LEAF protein, a homolog of the cyanobacterial bilin lyase, retains the bilin-binding pocket for a yet unknown function.
Plant J., 104, 2020
1KCG
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BU of 1kcg by Molmil
NKG2D in complex with ULBP3
分子名称: GLUTATHIONE, NKG2-D type II integral membrane protein, ULBP3 protein
著者Radaev, S, Sun, P.
登録日2001-11-08
公開日2002-01-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Conformational plasticity revealed by the cocrystal structure of NKG2D and its class I MHC-like ligand ULBP3.
Immunity, 15, 2001
6LMS
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BU of 6lms by Molmil
Solution NMR structure cold shock domain of YB1 from Homo sapiens
分子名称: Y-box-binding protein 1
著者Li, S, Zhang, J, Yang, Y.
登録日2019-12-26
公開日2020-07-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of DNA binding to human YB-1 cold shock domain regulated by phosphorylation.
Nucleic Acids Res., 48, 2020
7CKG
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BU of 7ckg by Molmil
Crystal structure of TMSiPheRS complexed with TMSiPhe
分子名称: 4-(trimethylsilyl)-L-phenylalanine, Tyrosine--tRNA ligase
著者Sun, J.P, Wang, J.Y, Zhu, Z.L, He, Q.T, Xiao, P.
登録日2020-07-17
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.053 Å)
主引用文献DeSiphering receptor core-induced and ligand-dependent conformational changes in arrestin via genetic encoded trimethylsilyl 1 H-NMR probe.
Nat Commun, 11, 2020
7CKH
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BU of 7ckh by Molmil
Crystal structure of TMSiPheRS
分子名称: Tyrosine--tRNA ligase
著者Sun, J.P, Wang, J.Y, Zhu, Z.L, He, Q.T, Xiao, P.
登録日2020-07-17
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79492676 Å)
主引用文献DeSiphering receptor core-induced and ligand-dependent conformational changes in arrestin via genetic encoded trimethylsilyl 1 H-NMR probe.
Nat Commun, 11, 2020
6KRG
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BU of 6krg by Molmil
Crystal structure of sfGFP Y182TMSiPhe
分子名称: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
著者Sun, J.P, Wang, J.Y, Zhu, Z.L, He, Q.T, Xiao, P.
登録日2019-08-21
公開日2020-09-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献DeSiphering receptor core-induced and ligand-dependent conformational changes in arrestin via genetic encoded trimethylsilyl 1 H-NMR probe.
Nat Commun, 11, 2020
7LUB
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BU of 7lub by Molmil
Crystal structure of recombinant human fumarase in complex with D-2-amino-3-phosphono-propionic acid
分子名称: D-2-AMINO-3-PHOSPHONO-PROPIONIC ACID, Fumarate hydratase, mitochondrial, ...
著者Cardoso, I.A, Nonato, M.C.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase.
Science, 379, 2023
7MBH
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BU of 7mbh by Molmil
Structure of Human Enolase 2 in complex with phosphoserine
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Gamma-enolase, ...
著者Leonard, P.G, Hicks, K.G, Rutter, J.
登録日2021-03-31
公開日2022-11-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase.
Science, 379, 2023
8GOF
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BU of 8gof by Molmil
Structure of hSLC19A1+PMX
分子名称: 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, Reduced folate transporter
著者Zhang, Q.X, Zhang, X.Y, Zhu, Y.L, Sun, P.P, Gao, A, Zhang, L.G, Gao, P.
登録日2022-08-24
公開日2022-10-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Recognition of cyclic dinucleotides and folates by human SLC19A1.
Nature, 612, 2022

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