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9CMT
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BU of 9cmt by Molmil
The crystal structure of HP1alpha CSD-Agno complex
分子名称: 3',6'-DIHYDROXY-3-OXO-3H-SPIRO[2-BENZOFURAN-1,9'-XANTHENE]-5-CARBOXYLIC ACID, Agnoprotein, Chromobox protein homolog 5
著者Goldgur, Y, Xie, W, Schaefer, U, Tarakhovsky, A, Patel, D, Chen, S.
登録日2024-07-15
公開日2025-05-28
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Chromatin mimicry by human JC virus.
Biorxiv, 2024
6DBP
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BU of 6dbp by Molmil
RNA-recognition motif 1 of human MSI2
分子名称: RNA-binding protein Musashi homolog 2
著者Goldgur, Y, Kharas, M.G, Minuesa, G.
登録日2018-05-03
公開日2019-05-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Small-molecule targeting of MUSASHI RNA-binding activity in acute myeloid leukemia.
Nat Commun, 10, 2019
1SI2
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BU of 1si2 by Molmil
Crystal structure of the PAZ domain of human eIF2c1 in complex with a 9-mer siRNA-like duplex of deoxynucleotide overhang
分子名称: 5'-R(*CP*GP*UP*GP*AP*CP*U)-D(P*CP*T)-3', Eukaryotic translation initiation factor 2C 1
著者Ye, K, Ma, J.B, Patel, D.
登録日2004-02-26
公開日2004-05-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain.
Nature, 429, 2004
1SI3
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BU of 1si3 by Molmil
Crystal structure of the PAZ domain of human eIF2c1 in complex with a 9-mer siRNA-like duplex
分子名称: 5'-R(*CP*GP*UP*GP*AP*CP*UP*CP*U)-3', Eukaryotic translation initiation factor 2C 1
著者Ye, K, Ma, J.B, Patel, D.
登録日2004-02-27
公開日2004-05-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain.
Nature, 429, 2004
6J23
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BU of 6j23 by Molmil
Crystal structure of arabidopsis ADAL complexed with GMP
分子名称: Adenosine/AMP deaminase family protein, GUANOSINE-5'-MONOPHOSPHATE, ZINC ION
著者Wu, B.X, Zhang, D, Nie, H.B, Shen, S.L, Li, S.S, Patel, D.J.
登録日2018-12-30
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure ofArabidopsis thaliana N6-methyl-AMP deaminase ADAL with bound GMP and IMP and implications forN6-methyl-AMP recognition and processing.
Rna Biol., 16, 2019
6J4T
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BU of 6j4t by Molmil
Crystal structure of arabidopsis ADAL complexed with IMP
分子名称: Adenosine/AMP deaminase family protein, INOSINIC ACID, ZINC ION
著者Wu, B.X, Zhang, D, Nie, H.B, Shen, S.L, Li, S.S, Patel, D.J.
登録日2019-01-10
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structure ofArabidopsis thaliana N6-methyl-AMP deaminase ADAL with bound GMP and IMP and implications forN6-methyl-AMP recognition and processing.
Rna Biol., 16, 2019
6IV5
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BU of 6iv5 by Molmil
Crystal structure of arabidopsis N6-mAMP deaminase MAPDA
分子名称: Adenosine/AMP deaminase family protein, PHOSPHATE ION, ZINC ION
著者Wu, B.X, Zhang, D, Nie, H.B, Shen, S.L, Li, S.S, Patel, D.J.
登録日2018-12-02
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.749 Å)
主引用文献Structure ofArabidopsis thaliana N6-methyl-AMP deaminase ADAL with bound GMP and IMP and implications forN6-methyl-AMP recognition and processing.
Rna Biol., 16, 2019
4RGF
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BU of 4rgf by Molmil
Crystal structure of the in-line aligned env22 twister ribozyme soaked with Mn2+
分子名称: MAGNESIUM ION, MANGANESE (II) ION, POTASSIUM ION, ...
著者Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D.
登録日2014-09-30
公開日2014-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2008 Å)
主引用文献In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
4RGE
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BU of 4rge by Molmil
Crystal structure of the in-line aligned env22 twister ribozyme
分子名称: MAGNESIUM ION, env22 twister ribozyme
著者Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D.
登録日2014-09-30
公開日2014-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
7DUF
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BU of 7duf by Molmil
Crystal structure of VIM1 PHD finger.
分子名称: E3 ubiquitin-protein ligase ORTHRUS 2, ZINC ION
著者Abhishek, S, Deeksha, W, Patel, D.J, Rajakumara, E.
登録日2021-01-08
公開日2021-08-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Helical and beta-Turn Conformations in the Peptide Recognition Regions of the VIM1 PHD Finger Abrogate H3K4 Peptide Recognition.
Biochemistry, 60, 2021
5HH7
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BU of 5hh7 by Molmil
crystal structure of Arabidopsis ORC1b BAH-PHD cassette in complex with unmodified H3 peptide
分子名称: Histone H3 1-15 peptide, Origin of replication complex subunit 1B, ZINC ION
著者Li, S, Du, J.
登録日2016-01-10
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Structural Basis for the Unique Multivalent Readout of Unmodified H3 Tail by Arabidopsis ORC1b BAH-PHD Cassette
Structure, 24, 2016
9BI4
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BU of 9bi4 by Molmil
cryo EM structure of dsDNA bound Mre11-Rad50 complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA repair protein RAD50, Double-strand break repair protein MRE11, ...
著者Yu, Y, Patel, D.J.
登録日2024-04-22
公開日2025-01-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure guided functional analysis of the S. cerevisiae Mre11 complex.
Res Sq, 2024
2H1M
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BU of 2h1m by Molmil
Synthesis, Oxidation Behavior, Crystallization and Structure of 2'-Methylseleno Guanosine Containing RNAs
分子名称: 5'-R(*GP*CP*AP*(XUG)P*AP*GP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3', SULFATE ION
著者Serganov, A.A.
登録日2006-05-16
公開日2006-07-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Synthesis, Oxidation Behavior, Crystallization and Structure of 2'-Methylseleno Guanosine Containing RNAs.
J.Am.Chem.Soc., 128, 2006
5Y87
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BU of 5y87 by Molmil
Structure-based Insights into Self-Cleavage by a Four-way Junctional Twister-Sister Ribozyme
分子名称: DNA/RNA (50-MER), MANGANESE (II) ION, RNA (5'-R(P*AP*CP*CP*CP*GP*CP*AP*AP*GP*GP*CP*CP*GP*AP*CP*GP*GP*C)-3')
著者Zheng, L, Micura, R.L, Ren, A.
登録日2017-08-19
公開日2017-11-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.132 Å)
主引用文献Structure-based insights into self-cleavage by a four-way junctional twister-sister ribozyme
Nat Commun, 8, 2017
5Y85
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BU of 5y85 by Molmil
Structure-based Insights into Self-Cleavage by a Four-way Junctional Twister-Sister Ribozyme
分子名称: DNA/RNA (50-MER), MAGNESIUM ION, RNA (5'-R(P*AP*CP*CP*CP*GP*CP*AP*AP*GP*GP*CP*CP*GP*AP*CP*GP*GP*C)-3')
著者Zheng, L, Micura, R.L, Ren, A.
登録日2017-08-18
公開日2017-11-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structure-based insights into self-cleavage by a four-way junctional twister-sister ribozyme
Nat Commun, 8, 2017
6AF0
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BU of 6af0 by Molmil
Structure of Ctr9, Paf1 and Cdc73 ternary complex from Myceliophthora thermophila
分子名称: Cdc73 protein, Ctr9 protein, Paf1 protein
著者Wang, Z, Deng, P, Zhou, Y.
登録日2018-08-07
公開日2018-09-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Transcriptional elongation factor Paf1 core complex adopts a spirally wrapped solenoidal topology.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4KPY
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BU of 4kpy by Molmil
DNA binding protein and DNA complex structure
分子名称: DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*CP*C)-3'), DNA (5'-D(P*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3'), DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3'), ...
著者Sheng, G, Zhao, H, Wang, J, Rao, Y, Wang, Y.
登録日2013-05-14
公開日2014-01-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.406 Å)
主引用文献Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage.
Proc.Natl.Acad.Sci.USA, 111, 2014
4ASK
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BU of 4ask by Molmil
CRYSTAL STRUCTURE OF JMJD3 WITH GSK-J1
分子名称: 3-[[2-pyridin-2-yl-6-(1,2,4,5-tetrahydro-3-benzazepin-3-yl)pyrimidin-4-yl]amino]propanoic acid, COBALT (II) ION, LYSINE-SPECIFIC DEMETHYLASE 6B, ...
著者Chung, C, Mosley, J, Liddle, J.
登録日2012-05-01
公開日2012-07-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献A Selective Jumonji H3K27 Demethylase Inhibitor Modulates the Proinflammatory Macrophage Response
Nature, 488, 2012
3NCU
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BU of 3ncu by Molmil
Structural and functional insights into pattern recognition by the innate immune receptor RIG-I
分子名称: 5'-R(*(GDP)P*AP*CP*GP*CP*UP*AP*GP*CP*GP*UP*C)-3', RIG-I, ZINC ION
著者Sheng, G, Li, H.
登録日2010-06-05
公開日2010-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and functional insights into 5'-ppp RNA pattern recognition by the innate immune receptor RIG-I.
Nat.Struct.Mol.Biol., 17, 2010
3DIM
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BU of 3dim by Molmil
Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Cs+ Soak
分子名称: CESIUM ION, ISOPROPYL ALCOHOL, LYSINE, ...
著者Serganov, A.A.
登録日2008-06-20
公開日2008-09-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
3DJ2
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BU of 3dj2 by Molmil
Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Tl+ Soak
分子名称: ISOPROPYL ALCOHOL, LYSINE, RNA (174-MER), ...
著者Serganov, A.A.
登録日2008-06-21
公開日2008-09-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
3DIG
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BU of 3dig by Molmil
CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO S-(2-aminoethyl)-L-cysteine
分子名称: ISOPROPYL ALCOHOL, L-THIALYSINE, POTASSIUM ION, ...
著者Serganov, A.A.
登録日2008-06-20
公開日2008-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
3DIX
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BU of 3dix by Molmil
Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, K+ anomalous data
分子名称: LYSINE, POTASSIUM ION, RNA (174-MER), ...
著者Serganov, A.A.
登録日2008-06-21
公開日2008-09-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
3DIR
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BU of 3dir by Molmil
Crystallization of the Thermotoga maritima lysine riboswitch bound to N6-1-iminoethyl-L-Lysine
分子名称: N~6~-[(1Z)-ethanimidoyl]-L-lysine, POTASSIUM ION, RNA (174-MER), ...
著者Serganov, A.A.
登録日2008-06-20
公開日2008-09-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
3DIL
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BU of 3dil by Molmil
Crystal structure of the Thermotoga maritima lysine riboswitch bound to lysine
分子名称: ISOPROPYL ALCOHOL, LYSINE, MAGNESIUM ION, ...
著者Serganov, A.A.
登録日2008-06-20
公開日2008-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008

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