Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5WJ9
DownloadVisualize
BU of 5wj9 by Molmil
Human TRPML1 channel structure in agonist-bound open conformation
分子名称: 2-{2-oxo-2-[(4S)-2,2,4-trimethyl-3,4-dihydroquinolin-1(2H)-yl]ethyl}-1H-isoindole-1,3(2H)-dione, Mucolipin-1
著者Schmiege, P, Li, X.
登録日2017-07-21
公開日2017-10-18
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Human TRPML1 channel structures in open and closed conformations.
Nature, 550, 2017
5V93
DownloadVisualize
BU of 5v93 by Molmil
Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Yang, K, Chang, J.-Y, Cui, Z, Li, X, Meng, R, Duan, L, Thongchol, J, Jakana, J, Huwe, C, Sacchettini, J, Zhang, J.
登録日2017-03-22
公開日2017-09-20
最終更新日2020-08-12
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural insights into species-specific features of the ribosome from the human pathogen Mycobacterium tuberculosis.
Nucleic Acids Res., 45, 2017
5TRD
DownloadVisualize
BU of 5trd by Molmil
Structure of RbkR (Riboflavin Kinase) from Thermoplasma acidophilum determined in complex with CTP and its cognate DNA operator
分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*TP*TP*AP*CP*TP*AP*AP*TP*TP*CP*AP*CP*GP*AP*GP*TP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*AP*CP*TP*CP*GP*TP*GP*AP*AP*TP*TP*AP*GP*TP*AP*A)-3'), ...
著者Vetting, M.W, Rodionova, I.A, Li, X, Osterman, A.L, Rodionov, D.A, Almo, S.C.
登録日2016-10-26
公開日2016-11-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of RbkR (Riboflavin Kinase) from Thermoplasma acidophilum determined in complex with CTP and its cognate DNA operator
To be published
5WQ7
DownloadVisualize
BU of 5wq7 by Molmil
CryoEM structure of type II secretion system secretin GspD in E.coli K12
分子名称: Putative type II secretion system protein D
著者Yan, Z, Yin, M, Li, X.
登録日2016-11-23
公開日2016-12-28
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structural insights into the secretin translocation channel in the type II secretion system
Nat. Struct. Mol. Biol., 24, 2017
5WQ9
DownloadVisualize
BU of 5wq9 by Molmil
CryoEM structure of type II secretion system secretin GspD G453A mutant in Vibrio cholerae
分子名称: Type II secretion system protein D
著者Yan, Z, Yin, M, Li, X.
登録日2016-11-23
公開日2016-12-28
最終更新日2017-02-22
実験手法ELECTRON MICROSCOPY (4.22 Å)
主引用文献Structural insights into the secretin translocation channel in the type II secretion system
Nat. Struct. Mol. Biol., 24, 2017
5WJ5
DownloadVisualize
BU of 5wj5 by Molmil
Human TRPML1 channel structure in closed conformation
分子名称: Mucolipin-1
著者Schmiege, P, Li, X.
登録日2017-07-21
公開日2017-10-18
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Human TRPML1 channel structures in open and closed conformations.
Nature, 550, 2017
5WQ8
DownloadVisualize
BU of 5wq8 by Molmil
CryoEM structure of type II secretion system secretin GspD in Vibrio cholerae
分子名称: Type II secretion system protein D
著者Yan, Z, Yin, M, Li, X.
登録日2016-11-23
公開日2016-12-28
最終更新日2019-10-16
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structural insights into the secretin translocation channel in the type II secretion system
Nat. Struct. Mol. Biol., 24, 2017
8IHS
DownloadVisualize
BU of 8ihs by Molmil
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with ochratoxin A
分子名称: (2~{S})-2-[[(3~{R})-5-chloranyl-3-methyl-8-oxidanyl-1-oxidanylidene-3,4-dihydroisochromen-7-yl]carbonylamino]-3-phenyl-propanoic acid, Amidohydrolase family protein, ZINC ION
著者Dai, L.H, Niu, D, Huang, J.-W, Li, X, Shen, P.P, Li, H, Hu, Y.M, Yang, Y, Chen, C.-C, Guo, R.-T.
登録日2023-02-23
公開日2023-08-30
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM structure and rational engineering of a superefficient ochratoxin A-detoxifying amidohydrolase.
J Hazard Mater, 458, 2023
7CJF
DownloadVisualize
BU of 7cjf by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody heavy chain, ...
著者Guo, Y, Li, X, Zhang, G, Fu, D, Schweizer, L, Zhang, H, Rao, Z.
登録日2020-07-10
公開日2020-11-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.108 Å)
主引用文献A SARS-CoV-2 neutralizing antibody with extensive Spike binding coverage and modified for optimal therapeutic outcomes.
Nat Commun, 12, 2021
8J85
DownloadVisualize
BU of 8j85 by Molmil
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 mutant S88E in complex with ochratoxin A
分子名称: (2~{S})-2-[[(3~{R})-5-chloranyl-3-methyl-8-oxidanyl-1-oxidanylidene-3,4-dihydroisochromen-7-yl]carbonylamino]-3-phenyl-propanoic acid, Amidohydrolase family protein, ZINC ION
著者Dai, L.H, Niu, D, Huang, J.-W, Li, X, Shen, P.P, Li, H, Hu, Y.M, Yang, Y, Chen, C.-C, Guo, R.-T.
登録日2023-04-30
公開日2023-08-30
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo-EM structure and rational engineering of a superefficient ochratoxin A-detoxifying amidohydrolase.
J Hazard Mater, 458, 2023
6IZO
DownloadVisualize
BU of 6izo by Molmil
Crystal structure of DNA polymerase sliding clamp from Caulobacter crescentus
分子名称: 1,2-ETHANEDIOL, Beta sliding clamp, DI(HYDROXYETHYL)ETHER
著者Jiang, X, Zhang, L, Teng, M, Li, X.
登録日2018-12-20
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Caulobacter crescentus beta sliding clamp employs a noncanonical regulatory model of DNA replication.
Febs J., 287, 2020
8IZB
DownloadVisualize
BU of 8izb by Molmil
Lysophosphatidylserine receptor GPR174-Gs complex
分子名称: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Gong, W, Liu, G, Li, X, Zhang, X.
登録日2023-04-06
公開日2023-11-01
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural basis for ligand recognition and signaling of the lysophosphatidylserine receptors GPR34 and GPR174.
Plos Biol., 21, 2023
8IZ4
DownloadVisualize
BU of 8iz4 by Molmil
Lysophosphatidylserine receptor GPR34-Gi complex
分子名称: Antibody fragment scFv16, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Gong, W, Liu, G, Li, X, Zhang, X.
登録日2023-04-06
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structural mechanisms of ligand binding and signaling in lysophosphatidylserine receptors
To Be Published
8JC0
DownloadVisualize
BU of 8jc0 by Molmil
V gamma9 V delta2 TCR and CD3 complex in LMNG
分子名称: CHOLESTEROL, T cell receptor delta variable 2,T cell receptor delta constant, T cell receptor gamma variable 9,T cell receptor gamma constant 1, ...
著者Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
登録日2023-05-10
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 2024
8JCB
DownloadVisualize
BU of 8jcb by Molmil
Vgamma5 Vdelta1 T cell receptor complex
分子名称: T cell receptor delta variable 1,T cell receptor delta constant, T cell receptor gamma variable 5,T cell receptor gamma constant 1, T-cell surface glycoprotein CD3 delta chain, ...
著者Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
登録日2023-05-10
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 2024
6JIR
DownloadVisualize
BU of 6jir by Molmil
Crystal structure of C. crescentus beta sliding clamp with PEG bound to putative beta-motif tethering region
分子名称: 1,2-ETHANEDIOL, Beta sliding clamp, DI(HYDROXYETHYL)ETHER, ...
著者Jiang, X, Teng, M, Li, X.
登録日2019-02-23
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Caulobacter crescentus beta sliding clamp employs a noncanonical regulatory model of DNA replication.
Febs J., 287, 2020
8IHR
DownloadVisualize
BU of 8ihr by Molmil
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 in complex with Phe
分子名称: Amidohydrolase family protein, PHENYLALANINE, ZINC ION
著者Dai, L.H, Niu, D, Huang, J.-W, Li, X, Shen, P.P, Li, H, Hu, Y.M, Yang, Y, Chen, C.-C, Guo, R.-T.
登録日2023-02-23
公開日2023-08-30
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM structure and rational engineering of a superefficient ochratoxin A-detoxifying amidohydrolase.
J Hazard Mater, 458, 2023
8IHQ
DownloadVisualize
BU of 8ihq by Molmil
Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3
分子名称: Amidohydrolase family protein, ZINC ION
著者Dai, L.H, Niu, D, Huang, J.-W, Li, X, Shen, P.P, Li, H, Hu, Y.M, Yang, Y, Chen, C.-C, Guo, R.-T.
登録日2023-02-23
公開日2023-08-30
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Cryo-EM structure and rational engineering of a superefficient ochratoxin A-detoxifying amidohydrolase.
J Hazard Mater, 458, 2023
6KJ3
DownloadVisualize
BU of 6kj3 by Molmil
120kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.60 A
分子名称: RNA-binding protein FUS
著者Zhou, H, Luo, F, Luo, Z, Li, D, Liu, C, Li, X.
登録日2019-07-20
公開日2019-10-02
最終更新日2024-03-27
実験手法ELECTRON CRYSTALLOGRAPHY (0.6 Å)
主引用文献Programming Conventional Electron Microscopes for Solving Ultrahigh-Resolution Structures of Small and Macro-Molecules.
Anal.Chem., 91, 2019
7DEO
DownloadVisualize
BU of 7deo by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Spike protein S1, ...
著者Fu, D, Zhang, G, Li, X, Rao, Z, Guo, Y.
登録日2020-11-04
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for SARS-CoV-2 neutralizing antibodies with novel binding epitopes.
Plos Biol., 19, 2021
7DET
DownloadVisualize
BU of 7det by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody scFv
著者Wang, Y, Zhang, G, Li, X, Rao, Z, Guo, Y.
登録日2020-11-05
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for SARS-CoV-2 neutralizing antibodies with novel binding epitopes.
Plos Biol., 19, 2021
7DEU
DownloadVisualize
BU of 7deu by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody scFv
著者Zhang, Z, Zhang, G, Li, X, Rao, Z, Guo, Y.
登録日2020-11-05
公開日2021-03-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for SARS-CoV-2 neutralizing antibodies with novel binding epitopes.
Plos Biol., 19, 2021
5ZV7
DownloadVisualize
BU of 5zv7 by Molmil
P domain of GII.17-2014/15 complexed with B-trisaccharide
分子名称: VP1, alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
著者Chen, Y, Li, X.
登録日2018-05-09
公開日2018-10-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019
5ZVC
DownloadVisualize
BU of 5zvc by Molmil
P domain of GII.13 norovirus capsid complexed with Lewis A trisaccharide
分子名称: GLYCEROL, Major capsid protein VP1, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Chen, Y, Li, X.
登録日2018-05-10
公開日2018-10-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Adaptations of Norovirus GII.17/13/21 Lineage through Two Distinct Evolutionary Paths.
J. Virol., 93, 2019
6KG7
DownloadVisualize
BU of 6kg7 by Molmil
Cryo-EM Structure of the Mammalian Tactile Channel Piezo2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Piezo-type mechanosensitive ion channel component 2
著者Wang, L, Zhou, H, Zhang, M, Liu, W, Deng, T, Zhao, Q, Li, Y, Lei, J, Li, X, Xiao, B.
登録日2019-07-11
公開日2019-09-04
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure and mechanogating of the mammalian tactile channel PIEZO2.
Nature, 573, 2019

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon