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4I6L
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BU of 4i6l by Molmil
Crystal structure of OTUB1 in complex with ubiquitin variant
分子名称: Ubiquitin, Ubiquitin thioesterase OTUB1
著者Juang, Y.C, Sicheri, F.
登録日2012-11-29
公開日2013-01-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.488 Å)
主引用文献A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013
4JVG
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BU of 4jvg by Molmil
B-Raf Kinase in Complex with Birb796
分子名称: 1-(5-TERT-BUTYL-2-P-TOLYL-2H-PYRAZOL-3-YL)-3-[4-(2-MORPHOLIN-4-YL-ETHOXY)-NAPHTHALEN-1-YL]-UREA, Serine/threonine-protein kinase B-raf
著者Lavoie, H, Thevakumaran, N, Gavory, G, Li, J, Padeganeh, A, Guiral, S, Duchaine, J, Mao, D.Y.L, Bouvier, M, Sicheri, F, Therrien, M.
登録日2013-03-25
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Inhibitors that stabilize a closed RAF kinase domain conformation induce dimerization.
Nat.Chem.Biol., 9, 2013
6DJ9
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BU of 6dj9 by Molmil
Structure of the USP15 DUSP domain in complex with a high-affinity Ubiquitin Variant (UbV)
分子名称: Ubiquitin Variant UbV 15.D, Ubiquitin carboxyl-terminal hydrolase 15
著者Singer, A.U, Teyra, J, Boehmelt, G, Lenter, M, Sicheri, F, Sidhu, S.S.
登録日2018-05-24
公開日2019-01-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural and Functional Characterization of Ubiquitin Variant Inhibitors of USP15.
Structure, 27, 2019
6DRM
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BU of 6drm by Molmil
OTU domain of Fam105A
分子名称: Inactive ubiquitin thioesterase FAM105A
著者Ceccarelli, D.F, Sicheri, F, Cordes, S.
登録日2018-06-12
公開日2019-05-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献FAM105A/OTULINL Is a Pseudodeubiquitinase of the OTU-Class that Localizes to the ER Membrane.
Structure, 27, 2019
4DDI
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BU of 4ddi by Molmil
Crystal structure of human OTUB1/UbcH5b~Ub/Ub
分子名称: Polyubiquitin-C, Ubiquitin-conjugating enzyme E2 D2, Ubiquitin thioesterase OTUB1
著者Juang, Y.C, Sanches, M, Sicheri, F.
登録日2012-01-18
公開日2012-02-22
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (3.802 Å)
主引用文献OTUB1 Co-opts Lys48-Linked Ubiquitin Recognition to Suppress E2 Enzyme Function.
Mol.Cell, 45, 2012
4DDG
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BU of 4ddg by Molmil
Crystal structure of human OTUB1/UbcH5b~Ub/Ub
分子名称: Polyubiquitin-C, Ubiquitin-conjugating enzyme E2 D2, Ubiquitin thioesterase OTUB1
著者Juang, Y.C, Sanches, M, Sicheri, F.
登録日2012-01-18
公開日2012-02-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.2987 Å)
主引用文献OTUB1 Co-opts Lys48-Linked Ubiquitin Recognition to Suppress E2 Enzyme Function.
Mol.Cell, 45, 2012
8BW9
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BU of 8bw9 by Molmil
Cryo-EM structure of the RAF activating complex KSR-MEK-CNK-HYP
分子名称: Connector enhancer of KSR protein CNK, Dual specificity mitogen-activated protein kinase kinase dSOR1, KSR, ...
著者Maisonneuve, P, Fronzes, R, Sicheri, F.
登録日2022-12-06
公開日2024-02-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献The CNK-HYP scaffolding complex promotes RAF activation by enhancing KSR-MEK interaction.
Nat.Struct.Mol.Biol., 2024
8BW8
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BU of 8bw8 by Molmil
Crystal structure of the dCNK-SAM-CRIC-PDZ/dHYP-SAM complex
分子名称: Connector enhancer of KSR protein CNK, GLYCEROL, Protein aveugle
著者Maisonneuve, P, Kurinov, I, Sicheri, F.
登録日2022-12-06
公開日2024-02-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The CNK-HYP scaffolding complex promotes RAF activation by enhancing KSR-MEK interaction.
Nat.Struct.Mol.Biol., 2024
8D6E
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BU of 8d6e by Molmil
Crystal Structure of Human Myt1 Kinase domain Bounded with RP-6306
分子名称: (1P)-2-amino-1-(3-hydroxy-2,6-dimethylphenyl)-5,6-dimethyl-1H-pyrrolo[2,3-b]pyridine-3-carboxamide, 1,2-ETHANEDIOL, GLYCEROL, ...
著者Pau, V.P.T, Mao, D.Y.L, Mader, P, Orlicky, S, Sicheri, F.
登録日2022-06-06
公開日2022-07-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery of an Orally Bioavailable and Selective PKMYT1 Inhibitor, RP-6306.
J.Med.Chem., 65, 2022
8D6D
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BU of 8d6d by Molmil
Crystal Structure of Human Myt1 Kinase domain Bounded with compound 39
分子名称: (1P)-2-amino-5-bromo-1-(3-hydroxy-2,6-dimethylphenyl)-1H-pyrrolo[2,3-b]quinoxaline-3-carboxamide, 1,2-ETHANEDIOL, Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase, ...
著者Pau, V.P.T, Mao, D.Y.L, Mader, P, Orlicky, S, Sicheri, F.
登録日2022-06-06
公開日2022-07-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Discovery of an Orally Bioavailable and Selective PKMYT1 Inhibitor, RP-6306.
J.Med.Chem., 65, 2022
8D6F
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BU of 8d6f by Molmil
Crystal Structure of Human Myt1 Kinase domain Bounded with Eph receptor inhibitor / compound 41
分子名称: (1M)-2-amino-1-(5-hydroxy-2-methylphenyl)-1H-pyrrolo[2,3-b]quinoxaline-3-carboxamide, Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase, SULFATE ION
著者Pau, V.P.T, Mao, D.Y.L, Mader, P, Orlicky, S, Sicheri, F.
登録日2022-06-06
公開日2022-07-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Discovery of an Orally Bioavailable and Selective PKMYT1 Inhibitor, RP-6306.
J.Med.Chem., 65, 2022
8D6C
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BU of 8d6c by Molmil
Crystal Structure of Human Myt1 Kinase domain Bounded with compound 28
分子名称: (1P)-2-amino-6-bromo-1-(3-hydroxy-2,6-dimethylphenyl)-1H-pyrrolo[2,3-b]quinoxaline-3-carboxamide, 1,2-ETHANEDIOL, GLYCEROL, ...
著者Pau, V.P.T, Mao, D.Y.L, Mader, P, Orlicky, S, Sicheri, F.
登録日2022-06-06
公開日2022-07-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of an Orally Bioavailable and Selective PKMYT1 Inhibitor, RP-6306.
J.Med.Chem., 65, 2022
5IBK
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BU of 5ibk by Molmil
Skp1-F-box in complex with a ubiquitin variant
分子名称: F-box/WD repeat-containing protein 7, Polyubiquitin-B, S-phase kinase-associated protein 1,S-phase kinase-associated protein 1
著者Orlicky, S, Sicheri, F.
登録日2016-02-22
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Inhibition of SCF ubiquitin ligases by engineered ubiquitin variants that target the Cul1 binding site on the Skp1-F-box interface.
Proc.Natl.Acad.Sci.USA, 113, 2016
5J26
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BU of 5j26 by Molmil
Crystal structure of a 53BP1 Tudor domain in complex with a ubiquitin variant
分子名称: Tumor suppressor p53-binding protein 1, Ubiquitin Variant i53
著者Wan, L, Canny, M, Juang, Y.C, Durocher, D, Sicheri, F.
登録日2016-03-29
公開日2016-12-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.5047 Å)
主引用文献A genetically encoded inhibitor of 53BP1 to stimulate homology-based gene editing
To Be Published
5JMV
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BU of 5jmv by Molmil
Crystal structure of mjKae1-pfuPcc1 complex
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein, ...
著者Wan, L, Sicheri, F.
登録日2016-04-29
公開日2016-07-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.3864696 Å)
主引用文献Structural and functional characterization of KEOPS dimerization by Pcc1 and its role in t6A biosynthesis.
Nucleic Acids Res., 44, 2016
3BS7
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BU of 3bs7 by Molmil
Crystal structure of the Sterile Alpha Motif (SAM) domain of Hyphen/Aveugle
分子名称: Protein aveugle
著者Rajakulendran, T, Sicheri, F.
登録日2007-12-22
公開日2008-02-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献CNK and HYP form a discrete dimer by their SAM domains to mediate RAF kinase signaling.
Proc.Natl.Acad.Sci.USA, 105, 2008
3BS5
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BU of 3bs5 by Molmil
Crystal Structure of hCNK2-SAM/dHYP-SAM Complex
分子名称: Connector enhancer of kinase suppressor of ras 2, Protein aveugle
著者Rajakulendran, T, Ceccarelli, D.F, Kurinov, I, Sicheri, F.
登録日2007-12-22
公開日2008-02-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献CNK and HYP form a discrete dimer by their SAM domains to mediate RAF kinase signaling.
Proc.Natl.Acad.Sci.USA, 105, 2008
3BQ3
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BU of 3bq3 by Molmil
Crystal structure of S. cerevisiae Dcn1
分子名称: Defective in cullin neddylation protein 1, GLYCEROL
著者Chou, Y.C, Sicheri, F.
登録日2007-12-19
公開日2008-01-29
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Dcn1 Functions as a Scaffold-Type E3 Ligase for Cullin Neddylation.
Mol.Cell, 29, 2008
6ML1
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BU of 6ml1 by Molmil
Structure of the USP15 deubiquitinase domain in complex with an affinity-matured inhibitory Ubv
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Singer, A.U, Teyra, J, Boehmelt, G, Lenter, M, Sicheri, F, Sidhu, S.S.
登録日2018-09-26
公開日2019-01-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Functional Characterization of Ubiquitin Variant Inhibitors of USP15.
Structure, 27, 2019
6NJG
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BU of 6njg by Molmil
Ubiquitin Variant in Complex with Ubiquitin Interacting Motif
分子名称: Polyubiquitin-B, Vacuolar protein sorting-associated protein 27
著者Manczyk, N, Sicheri, F.
登録日2019-01-03
公開日2019-03-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Dimerization of a ubiquitin variant leads to high affinity interactions with a ubiquitin interacting motif.
Protein Sci., 28, 2019
6NTD
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BU of 6ntd by Molmil
Crystal Structure of G12V HRas-GppNHp bound in complex with the engineered RBD variant 12 of CRAF Kinase protein
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Maisonneuve, P, Kurinov, I, Wiechmann, S, Ernst, A, Sicheri, F.
登録日2019-01-28
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Conformation-specific inhibitors of activated Ras GTPases reveal limited Ras dependency of patient-derived cancer organoids.
J.Biol.Chem., 295, 2020
6NSQ
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BU of 6nsq by Molmil
Crystal structure of BRAF kinase domain bound to the inhibitor 2l
分子名称: 5-[(4-amino-1-ethyl-1H-pyrazolo[3,4-d]pyrimidin-3-yl)ethynyl]-N-(4-chlorophenyl)-6-methylisoquinolin-1-amine, Serine/threonine-protein kinase B-raf
著者Maisonneuve, P, Kurinov, I, Assadieskandar, A, Yu, C, Zhang, C, Sicheri, F.
登録日2019-01-25
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Rigidification Dramatically Improves Inhibitor Selectivity for RAF Kinases.
Acs Med.Chem.Lett., 10, 2019
6NTC
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BU of 6ntc by Molmil
Crystal Structure of G12V HRas-GppNHp bound in complex with the engineered RBD variant 1 of CRAF Kinase protein
分子名称: GLYCEROL, GTPase HRas, MAGNESIUM ION, ...
著者Maisonneuve, P, Kurinov, I, Wiechmann, S, Ernst, A, Sicheri, F.
登録日2019-01-28
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Conformation-specific inhibitors of activated Ras GTPases reveal limited Ras dependency of patient-derived cancer organoids.
J.Biol.Chem., 295, 2020
2F8K
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BU of 2f8k by Molmil
Sequence specific recognition of RNA hairpins by the SAM domain of Vts1
分子名称: 5'-R(*UP*AP*AP*UP*CP*UP*UP*UP*GP*AP*CP*AP*GP*AP*UP*U)-3', Protein VTS1
著者Aviv, T, Lin, Z, Ben-Ari, G, Smibert, C.A, Sicheri, F.
登録日2005-12-02
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
Nat.Struct.Mol.Biol., 13, 2006
1OPS
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BU of 1ops by Molmil
ICE-BINDING SURFACE ON A TYPE III ANTIFREEZE PROTEIN FROM OCEAN POUT
分子名称: TYPE III ANTIFREEZE PROTEIN
著者Yang, D.S.C, Hon, W.-C, Bubanko, S, Xue, Y, Seetharaman, J, Hew, C.L, Sicheri, F.
登録日1997-11-17
公開日1998-05-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of the ice-binding surface on a type III antifreeze protein with a "flatness function" algorithm.
Biophys.J., 74, 1998

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