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7OEH
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BU of 7oeh by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ059b
分子名称: 4-[[(3S)-3-cyclopropyl-2-azaspiro[3.3]heptan-2-yl]methyl]-N-[[(3S)-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
7OEG
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BU of 7oeg by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ040b
分子名称: (R)-4-((2-azaspiro[3.3]heptan-2-yl)methyl)-N-((1-(6-(benzylamino)pyrimidin-4-yl)-3-hydroxypiperidin-3-yl)methyl)benzamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
7OEM
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BU of 7oem by Molmil
Crystal structure of the human METTL3-METTL14 complex with compound UOZ120
分子名称: 4-[(4,4-dimethylpiperidin-1-yl)methyl]-2-methylsulfanyl-~{N}-[[(3~{R})-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide, ACETATE ION, MAGNESIUM ION, ...
著者Bedi, R.K, Huang, D, Caflisch, A.
登録日2021-05-03
公開日2021-10-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-Based Design of Inhibitors of the m6A-RNA Writer Enzyme METTL3
Acs Bio Med Chem Au, 2023
6RT5
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BU of 6rt5 by Molmil
The YTH domain of YTHDC1 protein in complex with Gm6AC oligonucleotide
分子名称: RNA (5'-R(*(6MZ)P*C)-3'), SULFATE ION, YTH domain-containing protein 1
著者Bedi, R, Sledz, P, Caflisch, A.
登録日2019-05-22
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Flexible Binding of m6A Reader Protein YTHDC1 to Its Preferred RNA Motif.
J Chem Theory Comput, 15, 2019
6RT7
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BU of 6rt7 by Molmil
The YTH domain of YTHDC1 protein in complex with Gm6ACU oligonucleotide
分子名称: RNA (5'-R(*(6MZ)P*C)-3'), SULFATE ION, YTH domain-containing protein 1
著者Bedi, R, Sledz, P, Caflisch, A.
登録日2019-05-22
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Flexible Binding of m6A Reader Protein YTHDC1 to Its Preferred RNA Motif.
J Chem Theory Comput, 15, 2019
6RT6
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BU of 6rt6 by Molmil
The YTH domain of YTHDC1 protein in complex with GGm6AC oligonucleotide
分子名称: RNA (5'-R(*(6MZ)P*C)-3'), SULFATE ION, YTH domain-containing protein 1
著者Bedi, R, Sledz, P, Caflisch, A.
登録日2019-05-22
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.461 Å)
主引用文献Flexible Binding of m6A Reader Protein YTHDC1 to Its Preferred RNA Motif.
J Chem Theory Comput, 15, 2019
6SQM
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BU of 6sqm by Molmil
Crystal structure of CREBBP bromodomain complexed with LA36
分子名称: 1,2-ETHANEDIOL, CREB-binding protein, ~{N}-[3-acetamido-5-[(3-methylcinnolin-5-yl)carbamoyl]phenyl]furan-2-carboxamide
著者Bedi, R.K, Laul, E, Nevado, C, Caflisch, A.
登録日2019-09-04
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of CREBBP bromodomain complexed with LA36
To Be Published
6RT4
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BU of 6rt4 by Molmil
The YTH domain of YTHDC1 protein in complex with m6ACU oligonucleotide
分子名称: RNA (5'-R(*(6MZ)P*C)-3'), SULFATE ION, YTH domain-containing protein 1
著者Bedi, R, Sledz, P, Caflisch, A.
登録日2019-05-22
公開日2019-11-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Flexible Binding of m6A Reader Protein YTHDC1 to Its Preferred RNA Motif.
J Chem Theory Comput, 15, 2019
6SXX
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BU of 6sxx by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with ACA007
分子名称: (3~{R})-1-ethanoylpyrrolidine-3-carboxylic acid, 1,2-ETHANEDIOL, CREBBP
著者Xiang, W, Bedi, R.K, Sledz, P, Caflisch, A.
登録日2019-09-26
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structure of the bromodomain of human CREBBP in complex with ACA007
To Be Published
6SQE
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BU of 6sqe by Molmil
Crystal structure of CREBBP bromodomain complexed with KD341
分子名称: 1,2-ETHANEDIOL, CREB-binding protein, ~{N}-[3-[(5-ethanoyl-2-ethoxy-phenyl)carbamoyl]-5-(1-methylpyrazol-3-yl)phenyl]-5-[(4-methylpiperazin-1-yl)methyl]furan-2-carboxamide
著者Bedi, R.K, Kirillova, M, Nevado, C, Caflisch, A.
登録日2019-09-03
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.506 Å)
主引用文献Crystal structure of CREBBP bromodomain complexed with KD341
To Be Published
6SQF
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BU of 6sqf by Molmil
Crystal structure of CREBBP bromodomain complexed with LB32A
分子名称: CREB-binding protein, ~{N}-[3-[[5-ethanoyl-2-[2-(2-oxa-6-azaspiro[3.3]heptan-6-yl)ethoxy]phenyl]carbamoyl]-5-(1-methylpyrazol-3-yl)phenyl]furan-2-carboxamide
著者Bedi, R.K, Laul, E, Nevado, C, Caflisch, A.
登録日2019-09-03
公開日2020-09-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Crystal structure of CREBBP bromodomain complexed with LB32A
To Be Published
6SW3
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BU of 6sw3 by Molmil
Crystal structure of CREBBP bromodomain L1109W mutant
分子名称: cDNA FLJ57039, highly similar to CREB-binding protein
著者Faessler, C, Bedi, R.K, Wiedmer, L, Caflisch, A.
登録日2019-09-19
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of CREBBP bromodomain L1109W mutant
To Be Published
2RU4
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BU of 2ru4 by Molmil
Designed Armadillo Repeat Protein Self-ASsembled Complex (YIIM2-MAII)
分子名称: Armadillo Repeat Protein, C-terminal fragment, MAII, ...
著者Zerbe, O, Christen, M.T, Plueckthun, A, Watson, R.P.
登録日2013-11-22
公開日2014-07-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure
Structure, 22, 2014
2RU5
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BU of 2ru5 by Molmil
Designed Armadillo Repeat Protein Fragment (MAII)
分子名称: Armadillo repeat protein C-terminal fragment
著者Zerbe, O, Christen, M.T, Plueckthun, A, Watson, R.P.
登録日2013-11-23
公開日2014-07-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure
Structure, 22, 2014
5J94
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BU of 5j94 by Molmil
Human cathepsin K mutant C25S in complex with the allosteric effector NSC13345
分子名称: 2-{[(carbamoylsulfanyl)acetyl]amino}benzoic acid, Cathepsin K, SULFATE ION
著者Novinec, M, Korenc, M, Lenarcic, B, Baici, A.
登録日2016-04-08
公開日2016-04-20
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.22002459 Å)
主引用文献A novel allosteric mechanism in the cysteine peptidase cathepsin K discovered by computational methods.
Nat Commun, 5, 2014
6Y86
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BU of 6y86 by Molmil
Active YidC insertase crystal structure with the first transmembrane domain resolved
分子名称: Membrane protein insertase YidC
著者Li, X.D, Nass, K.
登録日2020-03-03
公開日2021-09-22
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The role of the N-terminal amphipathic helix in bacterial YidC: Insights from functional studies, the crystal structure and molecular dynamics simulations.
Biochim Biophys Acta Biomembr, 1864, 2022
2XYH
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BU of 2xyh by Molmil
Caspase-3:CAS60254719
分子名称: 5-CHLORO-4-OXOPENTANOIC ACID, CASPASE-3 SUBUNIT P12, CASPASE-3 SUBUNIT P17
著者Ganesan, R, Jelakovic, S, Grutter, M.G, Mittl, P.R.
登録日2010-11-17
公開日2011-08-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献In Silico Identification and Crystal Structure Validation of Caspase-3 Inhibitors without a P1 Aspartic Acid Moiety.
Acta Crystallogr.,Sect.F, 67, 2011
2XYG
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BU of 2xyg by Molmil
Caspase-3:CAS329306
分子名称: CASPASE-3 SUBUNIT P12, CASPASE-3 SUBUNIT P17, N-[(2S)-4-chloro-3-oxo-1-phenyl-butan-2-yl]-4-methyl-benzenesulfonamide
著者Ganesan, R, Jelakovic, S, Grutter, M.G, Mittl, P.R.
登録日2010-11-17
公開日2011-08-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献In Silico Identification and Crystal Structure Validation of Caspase-3 Inhibitors without a P1 Aspartic Acid Moiety.
Acta Crystallogr.,Sect.F, 67, 2011
2XYP
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BU of 2xyp by Molmil
Caspase-3:CAS26049945
分子名称: CASPASE-3 SUBUNIT P12, CASPASE-3 SUBUNIT P17, PHENYLMETHYL N-[(2S)-4-CHLORO-3-OXO-1-PHENYL-BUTAN-2-YL]CARBAMATE
著者Ganesan, R, Jelakovic, S, Grutter, M.G, Mittl, P.R.
登録日2010-11-18
公開日2011-08-17
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献In Silico Identification and Crystal Structure Validation of Caspase-3 Inhibitors without a P1 Aspartic Acid Moiety.
Acta Crystallogr.,Sect.F, 67, 2011
2M10
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BU of 2m10 by Molmil
trans form of a photoswitchable PDZ domain crosslinked with an azobenzene derivative
分子名称: 3,3'-(E)-diazene-1,2-diylbis{6-[(chloroacetyl)amino]benzenesulfonic acid}, Tyrosine-protein phosphatase non-receptor type 13
著者Walser, R.
登録日2012-11-09
公開日2013-07-03
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Kinetic response of a photoperturbed allosteric protein.
Proc.Natl.Acad.Sci.USA, 110, 2013
2M0Z
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BU of 2m0z by Molmil
cis form of a photoswitchable PDZ domain crosslinked with an azobenzene derivative
分子名称: 3,3'-(E)-diazene-1,2-diylbis{6-[(chloroacetyl)amino]benzenesulfonic acid}, Tyrosine-protein phosphatase non-receptor type 13
著者Walser, R, Zerbe, O, Hamm, P.
登録日2012-11-09
公開日2013-07-03
最終更新日2025-03-26
実験手法SOLUTION NMR
主引用文献Kinetic response of a photoperturbed allosteric protein.
Proc.Natl.Acad.Sci.USA, 110, 2013
6CPS
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BU of 6cps by Molmil
Crystal structure of the bromodomain of human ATAD2 with a disulfide bridge
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ATPase family AAA domain-containing protein 2, SULFATE ION
著者Glass, K.C, Eckenroth, B.E, Carlson, S.
登録日2018-03-14
公開日2018-12-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Disulfide bridge formation influences ligand recognition by the ATAD2 bromodomain.
Proteins, 87, 2019
6EPS
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BU of 6eps by Molmil
The ATAD2 bromodomain in complex with compound UZH-DQ41
分子名称: (2~{R})-~{N}-[5-[3,5-bis(oxidanyl)phenyl]-4-ethanoyl-1,3-thiazol-2-yl]piperazine-2-carboxamide, ATPase family AAA domain-containing protein 2, SULFATE ION
著者Sledz, P, Caflisch, A.
登録日2017-10-12
公開日2018-10-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.081 Å)
主引用文献Hitting a moving target: simulation and crystallography study of ATAD2 bromodomain blockers
To Be Published
8QAN
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BU of 8qan by Molmil
Crystal Structure of the first bromodomain of BRD4 in complex with acetyl-pyrrole derivative compound 79
分子名称: 1,2-ETHANEDIOL, 1-[2-methyl-4-(3-methylbutyl)-5-(2-piperazin-1-yl-1,3-thiazol-4-yl)-1~{H}-pyrrol-3-yl]ethanone, Bromodomain-containing protein 4
著者Dalle Vedove, A, Cazzanelli, G, Lolli, G.
登録日2023-08-23
公開日2024-09-11
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Enhanced cellular death in liver and breast cancer cells by dual BET/BRPF1 inhibitors.
Protein Sci., 33, 2024
8QAP
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BU of 8qap by Molmil
Crystal Structure of the first bromodomain of BRD4 in complex with acetyl-pyrrole derivative compound 2
分子名称: 1,2-ETHANEDIOL, 2-[4-(3,6,6-trimethyl-4-oxidanylidene-5,7-dihydro-2~{H}-isoindol-1-yl)-1,3-thiazol-2-yl]guanidine, Bromodomain-containing protein 4
著者Dalle Vedove, A, Cazzanelli, G, Lolli, G.
登録日2023-08-23
公開日2024-09-11
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Enhanced cellular death in liver and breast cancer cells by dual BET/BRPF1 inhibitors.
Protein Sci., 33, 2024

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件を2025-07-09に公開中

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