Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5J36
DownloadVisualize
BU of 5j36 by Molmil
Crystal structure of 60-mer BFDV Capsid Protein
分子名称: Beak and feather disease virus capsid protein, PHOSPHATE ION
著者Sarker, S, Raidal, S, Aragao, D, Forwood, J.K.
登録日2016-03-30
公開日2016-05-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016
6RNJ
DownloadVisualize
BU of 6rnj by Molmil
TR-SMX closed state structure (0-5ms) of bacteriorhodopsin
分子名称: Bacteriorhodopsin, RETINAL
著者Weinert, T, Skopintsev, P, James, D, Kekilli, D, Furrer, F, Bruenle, S, Mous, S, Nogly, P, Standfuss, J.
登録日2019-05-08
公開日2019-07-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Proton uptake mechanism in bacteriorhodopsin captured by serial synchrotron crystallography.
Science, 365, 2019
6HL1
DownloadVisualize
BU of 6hl1 by Molmil
Crystal Structure of Farnesoid X receptor (FXR) with bound NCoA-2 peptide and CDCA
分子名称: Bile acid receptor, CHENODEOXYCHOLIC ACID, NCoA-2 peptide (Nuclear receptor coactivator 2), ...
著者Kudlinzki, D, Merk, D, Linhard, V.L, Saxena, K, Schubert-Zsilavecz, M, Schwalbe, H.
登録日2018-09-10
公開日2019-05-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Molecular tuning of farnesoid X receptor partial agonism.
Nat Commun, 10, 2019
6HL0
DownloadVisualize
BU of 6hl0 by Molmil
Crystal Structure of Farnesoid X receptor (FXR) with bound NCoA-2 peptide
分子名称: Bile acid receptor, NCoA-2 peptide (Nuclear receptor coactivator 2), LYS-GLU-ASN-ALA-LEU-LEU-ARG-TYR-LEU-LEU-ASP-LYS-ASP
著者Kudlinzki, D, Merk, D, Linhard, V.L, Saxena, K, Schubert-Zsilavecz, M, Schwalbe, H.
登録日2018-09-10
公開日2019-05-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Molecular tuning of farnesoid X receptor partial agonism.
Nat Commun, 10, 2019
5J09
DownloadVisualize
BU of 5j09 by Molmil
Crystal structure of decameric BFDV Capsid Protein
分子名称: Beak and feather disease virus capsid protein
著者Sarker, S, Raidal, S, Aragao, D, Forwood, J.K.
登録日2016-03-28
公開日2016-05-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016
9JBP
DownloadVisualize
BU of 9jbp by Molmil
Cryo-EM structure of human SOD1 (C6A/C111A) amyloid filament
分子名称: Superoxide dismutase [Cu-Zn], Unassigned poly-alanine model
著者Baek, Y, Kim, H, Lee, D, Kim, D, Jo, E, Roh, S.-H, Ha, N.-C.
登録日2024-08-27
公開日2025-01-15
最終更新日2025-02-05
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structural insights into the role of reduced cysteine residues in SOD1 amyloid filament formation.
Proc.Natl.Acad.Sci.USA, 122, 2025
9JBO
DownloadVisualize
BU of 9jbo by Molmil
Cryo-EM structure of human SOD1 (WT) amyloid filament
分子名称: Superoxide dismutase [Cu-Zn]
著者Baek, Y, Kim, H, Lee, D, Kim, D, Jo, E, Roh, S.-H, Ha, N.-C.
登録日2024-08-27
公開日2025-01-15
最終更新日2025-02-05
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Structural insights into the role of reduced cysteine residues in SOD1 amyloid filament formation.
Proc.Natl.Acad.Sci.USA, 122, 2025
1EPH
DownloadVisualize
BU of 1eph by Molmil
THREE-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE STRUCTURES OF MOUSE EPIDERMAL GROWTH FACTOR IN ACIDIC AND PHYSIOLOGICAL PH SOLUTIONS
分子名称: EPIDERMAL GROWTH FACTOR
著者Kohda, D, Inagaki, F.
登録日1992-03-24
公開日1994-01-31
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献Three-dimensional nuclear magnetic resonance structures of mouse epidermal growth factor in acidic and physiological pH solutions.
Biochemistry, 31, 1992
5I9X
DownloadVisualize
BU of 5i9x by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with bosutinib (SKI-606)
分子名称: 1,2-ETHANEDIOL, 4-[(2,4-dichloro-5-methoxyphenyl)amino]-6-methoxy-7-[3-(4-methylpiperazin-1-yl)propoxy]quinoline-3-carbonitrile, Ephrin type-A receptor 2
著者Kudlinzki, D, Linhard, V.L, Gande, S.L, Sreeramulu, S, Saxena, K, Heinzlmeir, S, Medard, G, Kuester, B, Schwalbe, H.
登録日2016-02-21
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.427 Å)
主引用文献Chemical Proteomics and Structural Biology Define EPHA2 Inhibition by Clinical Kinase Drugs.
ACS Chem. Biol., 11, 2016
6SND
DownloadVisualize
BU of 6snd by Molmil
crystal structure of LN01 Fab in complex with an HIV-1 gp41 peptide
分子名称: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
著者Caillat, C, Pinto, D, Corti, D, Fenwick, C, Pantaleo, G, Weissenhorn, W.
登録日2019-08-23
公開日2019-11-06
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Basis for Broad HIV-1 Neutralization by the MPER-Specific Human Broadly Neutralizing Antibody LN01.
Cell Host Microbe, 26, 2019
5MMP
DownloadVisualize
BU of 5mmp by Molmil
E. coli DNA Gyrase B 24 kDa ATPase domain in complex with 1-ethyl-3-[5-pyridin-4-yl-8-(pyridin-3-ylamino)-isoquinolin-3-yl]-urea
分子名称: 1-ethyl-3-[5-pyridin-4-yl-8-(pyridin-3-ylamino)isoquinolin-3-yl]urea, DNA gyrase subunit B
著者Panchaud, P, Bruyere, T, Blumstein, A.-C, Bur, D, Chambovey, A, Ertel, E.A, Gude, M, Hubschwerlen, C, Jacob, L, Kimmerlin, T, Pfeifer, T, Prade, L, Seiler, P, Ritz, D, Rueedi, G.
登録日2016-12-12
公開日2017-04-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery and Optimization of Isoquinoline Ethyl Ureas as Antibacterial Agents.
J. Med. Chem., 60, 2017
6HBJ
DownloadVisualize
BU of 6hbj by Molmil
Echovirus 18 empty particle
分子名称: Viral protein 1, Viral protein 2, Viral protein 3
著者Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
登録日2018-08-10
公開日2019-03-20
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
7B5F
DownloadVisualize
BU of 7b5f by Molmil
Structure of echovirus 18 in complex with neonatal Fc receptor
分子名称: Beta-2-microglobulin, Echovirus 18 viral protein 1, Echovirus 18 viral protein 2, ...
著者Buchta, D, Levdansky, Y, Fuzik, T, Mukhamedova, L, Moravcova, J, Hrebik, D, Andersen, J.T, Plevka, P.
登録日2020-12-03
公開日2022-01-12
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of echovirus 18 in complex with neonatal Fc receptor
To Be Published
9GS7
DownloadVisualize
BU of 9gs7 by Molmil
Cryo-EM structure of human SLC35B1-E33A variant with AMP-PNP
分子名称: Fv-MBP, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Solute carrier family 35 member B1
著者Gulati, A, Ahn, D, Suades, A, Drew, D.
登録日2024-09-13
公開日2025-05-21
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
9GS5
DownloadVisualize
BU of 9gs5 by Molmil
Cryo-EM structure of human SLC35B1-E33A variant with ADP in outward facing conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fv-MBP, Solute carrier family 35 member B1
著者Gulati, A, Ahn, D, Suades, A, Drew, D.
登録日2024-09-13
公開日2025-05-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure and step-wise nucleotide translocation of the human ATP/ADP exchanger SLC35B1
To Be Published
6HVB
DownloadVisualize
BU of 6hvb by Molmil
NMR structure of Urotensin Peptide Asp-c[Cys-Phe-(N-Me)Trp-Lys-Tyr-Cys]-Val in SDS solution
分子名称: Urotensin-2
著者Brancaccio, D, Carotenuto, A, Merlino, F, Billard, E, Yousif, A.M, Di Maro, S, Abate, L, Bellavita, R, D'Emmanuele di Villa Bianca, R, Santicioli, P, Marinelli, L, Novellino, E, Hebert, T.E, Lubell, W.D, Chatenet, D, Grieco, P.
登録日2018-10-10
公開日2019-01-16
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献Functional Selectivity Revealed by N-Methylation Scanning of Human Urotensin II and Related Peptides.
J.Med.Chem., 62, 2019
5VZ3
DownloadVisualize
BU of 5vz3 by Molmil
Growth Factor Crystal Structure at 1.97 Angstrom Resolution
分子名称: Growth/differentiation factor 15
著者Lakshminarasimhan, D, White, A, Suto, R.K.
登録日2017-05-26
公開日2017-09-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Non-homeostatic body weight regulation through a brainstem-restricted receptor for GDF15.
Nature, 550, 2017
4NC3
DownloadVisualize
BU of 4nc3 by Molmil
Crystal structure of the 5-HT2B receptor solved using serial femtosecond crystallography in lipidic cubic phase.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHOLESTEROL, ...
著者Liu, W, Wacker, D, Gati, C, Han, G.W, James, D, Wang, D, Nelson, G, Weierstall, U, Katritch, V, Barty, A, Zatsepin, N.A, Li, D, Messerschmidt, M, Boutet, S, Williams, G.J, Koglin, J.E, Seibert, M.M, Wang, C, Shah, S.T.A, Basu, S, Fromme, R, Kupitz, C, Rendek, K.N, Grotjohann, I, Fromme, P, Kirian, R.A, Beyerlein, K.R, White, T.A, Chapman, H.N, Caffrey, M, Spence, J.C.H, Stevens, R.C, Cherezov, V, GPCR Network (GPCR)
登録日2013-10-23
公開日2013-12-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Serial femtosecond crystallography of G protein-coupled receptors.
Science, 342, 2013
1J6Y
DownloadVisualize
BU of 1j6y by Molmil
Solution structure of Pin1At from Arabidopsis thaliana
分子名称: peptidyl-prolyl cis-trans isomerase
著者Landrieu, I, Wieruszeski, J.M, Wintjens, R, Inze, D, Lippens, G.
登録日2001-05-15
公開日2002-08-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of the Single-domain Prolyl Cis/Trans Isomerase PIN1At from Arabidopsis thaliana
J.Mol.Biol., 320, 2002
6I7D
DownloadVisualize
BU of 6i7d by Molmil
Plasmodium falciparum Myosin A, post-rigor and rigor-like states
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Myosin-A
著者Robert-Paganin, J, Auguin, D, Moussaoui, D, Jousset, G, Baum, J, Trybus, K.M, Houdusse, A.
登録日2018-11-16
公開日2019-08-07
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Plasmodium myosin A drives parasite invasion by an atypical force generating mechanism.
Nat Commun, 10, 2019
5VOS
DownloadVisualize
BU of 5vos by Molmil
VGSNKGAIIGL from Amyloid Beta determined by MicroED
分子名称: Amyloid beta A4 protein
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S, Griner, S.L, Gonen, T.
登録日2017-05-03
公開日2018-01-03
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.42 Å)
主引用文献Common fibrillar spines of amyloid-beta and human islet amyloid polypeptide revealed by microelectron diffraction and structure-based inhibitors.
J. Biol. Chem., 293, 2018
5LOQ
DownloadVisualize
BU of 5loq by Molmil
Structure of coproheme bound HemQ from Listeria monocytogenes
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, Putative heme-dependent peroxidase lmo2113, ...
著者Puehringer, D, Mlynek, G, Hofbauer, S, Djinovic-Carugo, K, Obinger, C.
登録日2016-08-09
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Hydrogen peroxide-mediated conversion of coproheme to heme b by HemQ-lessons from the first crystal structure and kinetic studies.
FEBS J., 283, 2016
3FE5
DownloadVisualize
BU of 3fe5 by Molmil
Crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from bovine kidney
分子名称: 3-hydroxyanthranilate 3,4-dioxygenase, FE (III) ION
著者Dilovic, I, Gliubich, F, Malpeli, G, Zanotti, G, Matkovic-Calogovic, D.
登録日2008-11-27
公開日2009-06-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal structure of bovine 3-hydroxyanthranilate 3,4-dioxygenase.
Biopolymers, 2009
5WRN
DownloadVisualize
BU of 5wrn by Molmil
Human thymidylate synthase complexed with dCMP
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Thymidylate synthase
著者Chen, D, Nordlund, P.
登録日2016-12-02
公開日2016-12-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Human thymidylate synthase complexed with dCMP
To Be Published
1CGL
DownloadVisualize
BU of 1cgl by Molmil
Structure of the catalytic domain of fibroblast collagenase complexed with an inhibitor
分子名称: CALCIUM ION, FIBROBLAST COLLAGENASE, N-[(1S)-3-{[(benzyloxy)carbonyl]amino}-1-carboxypropyl]-L-leucyl-N-(2-morpholin-4-ylethyl)-L-phenylalaninamide, ...
著者Lovejoy, B, Cleasby, A, Hassell, A.M, Longley, K, Luther, M.A, Weigl, D, Mcgeehan, G, Mcelroy, A.B, Drewry, D, Lambert, M.H, Jordan, S.R.
登録日1993-11-17
公開日1995-02-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the catalytic domain of fibroblast collagenase complexed with an inhibitor.
Science, 263, 1994

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon