Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8HZ5
DownloadVisualize
BU of 8hz5 by Molmil
The homodimer of a biotin carboxylase isoform from chloroflexus aurantiacus
分子名称: Biotin carboxylase
著者Shen, J, Wu, W, Xu, X.
登録日2023-01-08
公開日2024-01-10
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Chloroflexus aurantiacus acetyl-CoA carboxylase evolves fused biotin carboxylase and biotin carboxyl carrier protein to complete carboxylation activity.
Mbio, 15, 2024
8HZ4
DownloadVisualize
BU of 8hz4 by Molmil
The tetrameric structure of biotin carboxylase from Chloroflexus aurantiacus in complex with bicarbonate
分子名称: Biotin carboxylase
著者Shen, J, Wu, W, Xu, X.
登録日2023-01-08
公開日2024-01-10
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Chloroflexus aurantiacus acetyl-CoA carboxylase evolves fused biotin carboxylase and biotin carboxyl carrier protein to complete carboxylation activity.
Mbio, 15, 2024
8IJK
DownloadVisualize
BU of 8ijk by Molmil
human KCNQ2-CaM-Ebio1 complex in the presence of PIP2
分子名称: Calmodulin-1, N-(1,2-dihydroacenaphthylen-5-yl)-4-fluoranyl-benzamide, Potassium voltage-gated channel subfamily KQT member 2
著者Ma, D, Guo, J.
登録日2023-02-27
公開日2024-01-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献A small-molecule activation mechanism that directly opens the KCNQ2 channel.
Nat.Chem.Biol., 20, 2024
8C3Y
DownloadVisualize
BU of 8c3y by Molmil
HB3VAR03 apo headstructure (PfEMP1 A)
分子名称: PfEMP1
著者Raghavan, S.S.R, Lavstsen, T, Wang, K.T.
登録日2022-12-29
公開日2023-08-02
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Endothelial protein C receptor binding induces conformational changes to severe malaria-associated group A PfEMP1.
Structure, 31, 2023
8C44
DownloadVisualize
BU of 8c44 by Molmil
HB3VAR03 apo headstructure (PfEMP1 A) complexed with EPCR
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Endothelial protein C receptor, PHOSPHATIDYLETHANOLAMINE, ...
著者Raghavan, S.S.R, Lavstsen, T, Wang, K.T.
登録日2022-12-31
公開日2023-08-16
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Endothelial protein C receptor binding induces conformational changes to severe malaria-associated group A PfEMP1.
Structure, 31, 2023
5IQ7
DownloadVisualize
BU of 5iq7 by Molmil
Crystal structure of 10E8-S74W Fab in complex with an HIV-1 gp41 peptide.
分子名称: 10E8-S74W Heavy Chain, 10E8-S74W Light Chain, gp41 MPER peptide
著者Ofek, G, Kwon, Y.D, Caruso, W, Kwong, P.D.
登録日2016-03-10
公開日2016-04-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2869 Å)
主引用文献Optimization of the Solubility of HIV-1-Neutralizing Antibody 10E8 through Somatic Variation and Structure-Based Design.
J.Virol., 90, 2016
5IQ9
DownloadVisualize
BU of 5iq9 by Molmil
Crystal structure of 10E8v4 Fab in complex with an HIV-1 gp41 peptide.
分子名称: 10E8v4 Heavy Chain, 10E8v4 Light Chain, gp41 MPER peptide
著者Ofek, G, Kwon, Y.D, Caruso, W, Kwong, P.D.
登録日2016-03-10
公開日2016-04-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Optimization of the Solubility of HIV-1-Neutralizing Antibody 10E8 through Somatic Variation and Structure-Based Design.
J.Virol., 90, 2016
6MTQ
DownloadVisualize
BU of 6mtq by Molmil
Crystal structure of VRC42.N1 Fab in complex with T117-F MPER scaffold
分子名称: Antibody VRC42.N1 Fab heavy chain, Antibody VRC42.N1 Fab light chain, VRC42 epitope T117-F scaffold
著者Kwon, Y.D, Law, W.H, Veradi, R, Doria-Rose, N.A, Kwong, P.D.
登録日2018-10-21
公開日2019-03-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Longitudinal Analysis Reveals Early Development of Three MPER-Directed Neutralizing Antibody Lineages from an HIV-1-Infected Individual.
Immunity, 50, 2019
7OP3
DownloadVisualize
BU of 7op3 by Molmil
Cryo-EM structure of P5B-ATPase E2PiSPM
分子名称: Cation-transporting ATPase, SPERMINE
著者Li, P, Gronberg, C, Wang, K.T, Salustros, N, Gourdon, P.E.
登録日2021-05-28
公開日2021-06-30
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and transport mechanism of P5B-ATPases.
Nat Commun, 12, 2021
7PGE
DownloadVisualize
BU of 7pge by Molmil
copper transporter PcoB
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Copper resistance protein B, LAURYL DIMETHYLAMINE-N-OXIDE, ...
著者Li, P, Gourdon, P.E.
登録日2021-08-13
公開日2022-07-06
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献PcoB is a defense outer membrane protein that facilitates cellular uptake of copper.
Protein Sci., 31, 2022
8I30
DownloadVisualize
BU of 8i30 by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with 32j
分子名称: (2~{R})-1-[4,4-bis(fluoranyl)cyclohexyl]carbonyl-4,4-bis(fluoranyl)-~{N}-[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(pyridin-2-ylmethylamino)butan-2-yl]pyrrolidine-2-carboxamide, 3C-like proteinase nsp5, CHLORIDE ION
著者Zeng, R, Huang, C, Xie, L.W, Wang, K, Liu, Y.Z, Yang, S.Y, Lei, J.
登録日2023-01-16
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery and structure-activity relationship studies of novel alpha-ketoamide derivatives targeting the SARS-CoV-2 main protease.
Eur.J.Med.Chem., 259, 2023
8I74
DownloadVisualize
BU of 8i74 by Molmil
Crystal structure of decarboxylated osteocalcin at pH 8.5
分子名称: Osteocalcin
著者Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
登録日2023-01-31
公開日2024-01-31
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structures of decarboxylated osteocalcin and implications for the interaction with its receptor
To Be Published
8I75
DownloadVisualize
BU of 8i75 by Molmil
Crystal structure of decarboxylated osteocalcin at pH 2.0
分子名称: Osteocalcin
著者Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
登録日2023-01-31
公開日2024-01-31
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Crystal structures of decarboxylated osteocalcin and implications for the interaction with its receptor
To Be Published
8I76
DownloadVisualize
BU of 8i76 by Molmil
Crystal structure of decarboxylated osteocalcin at pH 2.0 without glycerol
分子名称: Osteocalcin
著者Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
登録日2023-01-31
公開日2024-01-31
実験手法X-RAY DIFFRACTION (1.381 Å)
主引用文献Crystal structures of decarboxylated osteocalcin and implications for the interaction with its receptor
To Be Published
4WXM
DownloadVisualize
BU of 4wxm by Molmil
FleQ REC domain from Pseudomonas aeruginosa PAO1
分子名称: Transcriptional regulator FleQ
著者Su, T, Liu, S, Gu, L.
登録日2014-11-14
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The REC domain mediated dimerization is critical for FleQ from Pseudomonas aeruginosa to function as a c-di-GMP receptor and flagella gene regulator
J.Struct.Biol., 192, 2015
6XK9
DownloadVisualize
BU of 6xk9 by Molmil
Cereblon in complex with DDB1, CC-90009, and GSPT1
分子名称: 2-(4-chlorophenyl)-N-({2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-5-yl}methyl)-2,2-difluoroacetamide, DNA damage-binding protein 1, Eukaryotic peptide chain release factor GTP-binding subunit ERF3A, ...
著者Clayton, T.L, Tran, E.T, Zhu, J, Pagarigan, B.E, Matyskiela, M.E, Chamberlain, P.P.
登録日2020-06-25
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.64 Å)
主引用文献CC-90009, a novel cereblon E3 ligase modulator, targets acute myeloid leukemia blasts and leukemia stem cells.
Blood, 137, 2021
7V26
DownloadVisualize
BU of 7v26 by Molmil
XG005-bound SARS-CoV-2 S
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, XG005 Heavy chain, ...
著者Zhan, W.Q, Zhang, X, Sun, L, Chen, Z.G.
登録日2021-08-07
公開日2021-10-20
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献An ultrapotent pan-beta-coronavirus lineage B ( beta-CoV-B) neutralizing antibody locks the receptor-binding domain in closed conformation by targeting its conserved epitope.
Protein Cell, 13, 2022
8ESM
DownloadVisualize
BU of 8esm by Molmil
Human triacylglycerol synthesizing enzyme DGAT1 in complex with T863 inhibitor
分子名称: Diacylglycerol O-acyltransferase 1, {(1r,4r)-4-[4-(4-amino-7,7-dimethyl-7H-pyrimido[4,5-b][1,4]oxazin-6-yl)phenyl]cyclohexyl}acetic acid
著者Sui, X, Kun, W, Walther, T, Farese, R, Liao, M.
登録日2022-10-14
公開日2023-06-07
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism of action for small-molecule inhibitors of triacylglycerol synthesis.
Nat Commun, 14, 2023
8ETM
DownloadVisualize
BU of 8etm by Molmil
Human triacylglycerol synthesizing enzyme DGAT1 in complex with DGAT1IN1 inhibitor
分子名称: Diacylglycerol O-acyltransferase 1, [(1S,4r)-4-{4-[(4S)-2-({[4-(trifluoromethoxy)phenyl]methyl}carbamoyl)imidazo[1,2-a]pyridin-6-yl]phenyl}cyclohexyl]acetic acid
著者Sui, X, Kun, W, Walther, T, Farese, R, Liao, M.
登録日2022-10-17
公開日2023-06-07
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Mechanism of action for small-molecule inhibitors of triacylglycerol synthesis.
Nat Commun, 14, 2023
6IEG
DownloadVisualize
BU of 6ieg by Molmil
Crystal structure of human MTR4
分子名称: ADENOSINE-5'-DIPHOSPHATE, Exosome RNA helicase MTR4, MAGNESIUM ION
著者Chen, J.Y, Yun, C.H.
登録日2018-09-14
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献NRDE2 negatively regulates exosome functions by inhibiting MTR4 recruitment and exosome interaction.
Genes Dev., 33, 2019
4DOY
DownloadVisualize
BU of 4doy by Molmil
Crystal structure of Dibenzothiophene desulfurization enzyme C
分子名称: Dibenzothiophene desulfurization enzyme C, GLYCEROL
著者Liu, S, Zhang, C, Zhu, D, Gu, L.
登録日2012-02-12
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.789 Å)
主引用文献Crystal structure of DszC from Rhodococcus sp. XP at 1.79 angstrom
Proteins, 82, 2014
7OP1
DownloadVisualize
BU of 7op1 by Molmil
Cryo-EM structure of P5B-ATPase E2PiAlF/SPM
分子名称: Cation-transporting ATPase, MAGNESIUM ION, SPERMINE, ...
著者Li, P, Gourdon, P.
登録日2021-05-28
公開日2021-06-30
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure and transport mechanism of P5B-ATPases.
Nat Commun, 12, 2021
7OP8
DownloadVisualize
BU of 7op8 by Molmil
Cryo-EM structure of P5B-ATPase E2Pinhibit
分子名称: BERYLLIUM TRIFLUORIDE ION, Cation-transporting ATPase, MAGNESIUM ION
著者Li, P, Gourdon, P.
登録日2021-05-31
公開日2021-06-30
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and transport mechanism of P5B-ATPases.
Nat Commun, 12, 2021
7OP5
DownloadVisualize
BU of 7op5 by Molmil
Cryo-EM structure of P5B-ATPase E2P
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, P5B-ATPase
著者Li, P, Gourdon, P.
登録日2021-05-29
公開日2021-06-30
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure and transport mechanism of P5B-ATPases.
Nat Commun, 12, 2021
5AEL
DownloadVisualize
BU of 5ael by Molmil
T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-597
分子名称: FARNESYL PYROPHOSPHATE SYNTHASE, MAGNESIUM ION, {2-[3-(hex-1-yn-1-yl)pyridinium-1-yl]ethane-1,1-diyl}bis(phosphonate)
著者Yang, G, Oldfield, E, No, J.H.
登録日2014-12-26
公開日2015-10-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Inhibition of Trypanosoma Brucei Cell Growth by Lipophilic Bisphosphonates: An in Vitro and in Vivo Investigation.
Antimicrob.Agents Chemother., 59, 2015

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon