Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6MMZ
DownloadVisualize
BU of 6mmz by Molmil
Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H29A mutant apoenzyme
Descriptor: Aminoglycoside N(3)-acetyltransferase, CHLORIDE ION, SULFATE ION
Authors:Stogios, P.J, Skarina, T, Xu, Z, Yim, V, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
2LF3
DownloadVisualize
BU of 2lf3 by Molmil
Solution NMR structure of HopPmaL_281_385 from Pseudomonas syringae pv. maculicola str. ES4326, Midwest Center for Structural Genomics target APC40104.5 and Northeast Structural Genomics Consortium target PsT2A
Descriptor: Effector protein hopAB3
Authors:Wu, B, Yee, A, Houliston, S, Semesi, A, Garcia, M, Singer, A.U, Savchenko, A, Montelione, G.T, Joachimiak, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Midwest Center for Structural Genomics (MCSG), Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2011-06-28
Release date:2011-07-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Analysis of HopPmaL Reveals the Presence of a Second Adaptor Domain Common to the HopAB Family of Pseudomonas syringae Type III Effectors.
Biochemistry, 51, 2012
6MN4
DownloadVisualize
BU of 6mn4 by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with apramycin
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, APRAMYCIN, ...
Authors:Stogios, P.J, Evdokimova, E, Michalska, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
4R0J
DownloadVisualize
BU of 4r0j by Molmil
The crystal structure of a functionally uncharacterized protein SMU1763c from Streptococcus mutans
Descriptor: CHLORIDE ION, SULFATE ION, Uncharacterized protein
Authors:Tan, K, Xu, X, Cui, H, Liu, S, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-07-31
Release date:2014-08-13
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.715 Å)
Cite:The crystal structure of a functionally uncharacterized protein SMU1763c from Streptococcus mutans
To be Published
6MSW
DownloadVisualize
BU of 6msw by Molmil
Crystal structure of BH1352 2-deoxyribose-5-phosphate from Bacillus halodurans, K184L mutant
Descriptor: Deoxyribose-phosphate aldolase, GLYCEROL
Authors:Stogios, P.J, Skarina, T, Kim, T, Yim, V, Yakunin, A, Savchenko, A.
Deposit date:2018-10-18
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.169 Å)
Cite:Rational engineering of 2-deoxyribose-5-phosphate aldolases for the biosynthesis of (R)-1,3-butanediol.
J.Biol.Chem., 295, 2020
6MN3
DownloadVisualize
BU of 6mn3 by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, apoenzyme
Descriptor: Aminoglycoside N(3)-acetyltransferase, AAC(3)-IVa, CHLORIDE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
4RD8
DownloadVisualize
BU of 4rd8 by Molmil
The crystal structure of a functionally-unknown protein from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Descriptor: Uncharacterized protein
Authors:Tan, K, Xu, X, Cui, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-18
Release date:2014-10-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The crystal structure of a functionally-unknown protein from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
To be Published
6MN0
DownloadVisualize
BU of 6mn0 by Molmil
Crystal structure of meta-AAC0038, an environmental aminoglycoside resistance enzyme, H168A mutant in complex with acetyl-CoA
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETYL COENZYME *A, Aminoglycoside N(3)-acetyltransferase, ...
Authors:Stogios, P.J, Skarina, T, Zu, X, Yim, V, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
2M2J
DownloadVisualize
BU of 2m2j by Molmil
Solution NMR structure of the N-terminal domain of STM1478 from Salmonella typhimurium LT2: Target STR147A of the Northeast Structural Genomics consortium (NESG), and APC101565 of the Midwest Center for Structural Genomics (MCSG).
Descriptor: Putative periplasmic protein
Authors:Houliston, S, Yee, A, Lemak, A, Garcia, M, Wu, B, Savchenko, A, Montelione, G.T, Arrowsmith, C, Northeast Structural Genomics Consortium (NESG), Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-12-21
Release date:2013-05-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Functional Characterization of DUF1471 Domains of Salmonella Proteins SrfN, YdgH/SssB, and YahO.
Plos One, 9, 2014
6CZP
DownloadVisualize
BU of 6czp by Molmil
2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive NAD(P)H-dependent Nitroreductase NfsB from Vibrio vulnificus in Complex with FMN
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ...
Authors:Minasov, G, Wawrzak, Z, Skarina, T, Grimshaw, S, Kwon, K, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-04-09
Release date:2018-04-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:2.2 Angstrom Resolution Crystal Structure Oxygen-Insensitive NAD(P)H-dependent Nitroreductase NfsB from Vibrio vulnificus in Complex with FMN.
To Be Published
5T79
DownloadVisualize
BU of 5t79 by Molmil
X-Ray Crystal Structure of a Novel Aldo-keto Reductases for the Biocatalytic Conversion of 3-hydroxybutanal to 1,3-butanediol
Descriptor: Aldo-keto Reductase, OXIDOREDUCTASE, CHLORIDE ION, ...
Authors:Brunzelle, J.S, Wawrzak, Z, Evdokimova, E, Kudritska, M, Savchenko, A, Yakunin, A.F, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-09-02
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural and biochemical studies of novel aldo-keto reductases for the biocatalytic conversion of 3-hydroxybutanal to 1,3-butanediol.
Appl. Environ. Microbiol., 2017
5SUJ
DownloadVisualize
BU of 5suj by Molmil
Crystal structure of uncharacterized protein LPG2148 from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Chang, C, Xu, X, Cui, H, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-08-03
Release date:2016-08-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.356 Å)
Cite:Discovery of Ubiquitin Deamidases in the Pathogenic Arsenal of Legionella pneumophila.
Cell Rep, 23, 2018
4RXI
DownloadVisualize
BU of 4rxi by Molmil
Structure of C-terminal domain of uncharacterized protein from Legionella pneumophila
Descriptor: hypothetical protein lpg0944
Authors:Cuff, M, Nocek, B, Evdokimova, E, Egorova, O, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-12-11
Release date:2015-05-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol Syst Biol, 12, 2016
4PSU
DownloadVisualize
BU of 4psu by Molmil
Crystal structure of alpha/beta hydrolase from Rhodopseudomonas palustris CGA009
Descriptor: Alpha/beta hydrolase, DODECAETHYLENE GLYCOL
Authors:Nocek, B, Hajighasemi, M, Xu, X, Cui, H, Savchenko, A, Yakunin, A.
Deposit date:2014-03-07
Release date:2015-03-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of alpha/beta hydrolase from Rhodopseudomonas palustris CGA009
TO BE PUBLISHED
6DKH
DownloadVisualize
BU of 6dkh by Molmil
The crystal structure of L-idonate 5-dehydrogenase from Escherichia coli str. K-12 substr. MG1655
Descriptor: L-idonate 5-dehydrogenase (NAD(P)(+)), ZINC ION
Authors:Tan, K, Evdokimova, E, McChesney, C, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-05-29
Release date:2018-06-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.608 Å)
Cite:The crystal structure of L-idonate 5-dehydrogenase from Escherichia coli str. K-12 substr. MG1655
To Be Published
6CN0
DownloadVisualize
BU of 6cn0 by Molmil
2.95 Angstrom Crystal Structure of 16S rRNA Methylase from Proteus mirabilis
Descriptor: 16S rRNA (guanine(1405)-N(7))-methyltransferase, CHLORIDE ION, CITRIC ACID, ...
Authors:Minasov, G, Wawrzak, Z, Di Leo, R, Evdokimova, E, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-03-06
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:2.95 Angstrom Crystal Structure of 16S rRNA Methylase from Proteus mirabilis.
To Be Published
4RXV
DownloadVisualize
BU of 4rxv by Molmil
The crystal structure of the N-terminal fragment of uncharacterized protein from Legionella pneumophila
Descriptor: hypothetical protein lpg0944
Authors:Nocek, B, Cuff, M, Evdokimova, E, Egorova, O, Joachimiak, A, Ensminger, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-12-12
Release date:2015-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.099 Å)
Cite:Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.
Mol Syst Biol, 12, 2016
4QN8
DownloadVisualize
BU of 4qn8 by Molmil
The crystal structure of an effector protein VipE from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Descriptor: BETA-MERCAPTOETHANOL, VipE
Authors:Tan, K, Xu, X, Cui, H, Liu, S, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-06-17
Release date:2014-07-16
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:The crystal structure of an effector protein VipE from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
To be Published
4I3F
DownloadVisualize
BU of 4i3f by Molmil
Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (PAH)-degrading bacterium Cycloclasticus zankles
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
Authors:Stogios, P.J, Xu, X, Dong, A, Cui, H, Alcaide, M, Tornes, J, Gertler, C, Yakimov, M.M, Golyshin, P.N, Ferrer, M, Savchenko, A.
Deposit date:2012-11-26
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the alpha / beta hydrolase family.
Biochem.J., 454, 2013
2LF6
DownloadVisualize
BU of 2lf6 by Molmil
Solution NMR structure of HopABPph1448_220_320 from Pseudomonas syringae pv. phaseolicola str. 1448A, Midwest Center for Structural Genomics target APC40132.4 and Northeast Structural Genomics Consortium target PsT3A
Descriptor: Effector protein hopAB1
Authors:Wu, B, Yee, A, Houliston, S, Semesi, A, Garcia, M, Singer, A.U, Savchenko, A, Montelione, G.T, Joachimiak, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Midwest Center for Structural Genomics (MCSG), Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2011-06-28
Release date:2011-07-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Analysis of HopPmaL Reveals the Presence of a Second Adaptor Domain Common to the HopAB Family of Pseudomonas syringae Type III Effectors.
Biochemistry, 51, 2012
6BNF
DownloadVisualize
BU of 6bnf by Molmil
Crystal structure of the intrinsic colistin resistance enzyme ICR(Mc) from Moraxella catarrhalis, catalytic domain, mono-zinc complex
Descriptor: ACETATE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Satchell, K.J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-16
Release date:2018-01-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Substrate recognition by a colistin resistance enzyme from Moraxella catarrhalis.
ACS Chem. Biol., 2018
1M33
DownloadVisualize
BU of 1m33 by Molmil
Crystal Structure of BioH at 1.7 A
Descriptor: 1,2-ETHANEDIOL, 3-HYDROXY-PROPANOIC ACID, BioH protein
Authors:Sanishvili, R, Savchenko, A, Skarina, T, Edwards, A, Joachimiak, A, Yakunin, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-06-26
Release date:2003-01-21
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Integrating structure, bioinformatics, and enzymology to discover function: BioH, a new carboxylesterase from Escherichia coli.
J.Biol.Chem., 278, 2003
4XCW
DownloadVisualize
BU of 4xcw by Molmil
Crystal structure of molybdenum cofactor biosynthesis protein MogA from Helicobacter pylori str. J99
Descriptor: Molybdopterin adenylyltransferase
Authors:Stogios, P.J, Onopriyenko, O, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-12-18
Release date:2015-02-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:To be published
To Be Published
6D33
DownloadVisualize
BU of 6d33 by Molmil
Crystal structure of BH1352 2-deoxyribose-5-phosphate from Bacillus halodurans
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyribose-phosphate aldolase, GLYCEROL
Authors:Stogios, P.J, Skarina, T, Kim, T, Yim, V, Yakunin, A, Savchenko, A.
Deposit date:2018-04-14
Release date:2019-10-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Rational engineering of 2-deoxyribose-5-phosphate aldolases for the biosynthesis of (R)-1,3-butanediol.
J.Biol.Chem., 295, 2020
4XV0
DownloadVisualize
BU of 4xv0 by Molmil
Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Trichoderma reesei
Descriptor: Beta-xylanase, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Xu, X, Cui, H, Savchenko, A.
Deposit date:2015-01-26
Release date:2015-02-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9697 Å)
Cite:Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Trichoderma reesei
To Be Published

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon