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Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor:	THR5
Authors:	Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:	2023-02-22
Release date:	2024-03-13
Last modified:	2024-04-10
Method:	X-RAY DIFFRACTION (2.93 Å)
Cite:	Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024

4GU3

Crystal structure of the T1L reovirus attachment protein sigma1 in complex with the GM2 glycan
Descriptor:	N-acetyl-alpha-neuraminic acid-(2-3)-[2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Outer capsid protein sigma-1
Authors:	Reiss, K, Stehle, T.
Deposit date:	2012-08-29
Release date:	2012-12-05
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (3.6 Å)
Cite:	The GM2 Glycan Serves as a Functional Coreceptor for Serotype 1 Reovirus. Plos Pathog., 8, 2012

2JWP

Malectin
Descriptor:	Malectin
Authors:	Schallus, T, Muhle-goll, C.
Deposit date:	2007-10-23
Release date:	2008-08-12
Last modified:	2024-05-29
Method:	SOLUTION NMR
Cite:	Malectin: A Novel Carbohydrate-binding Protein of the Endoplasmic Reticulum and a Candidate Player in the Early Steps of Protein N-Glycosylation Mol.Cell.Biol., 19, 2008

4FQ2

Crystal Structure of 10-1074 Fab
Descriptor:	1,2-ETHANEDIOL, Fab heavy chain, Fab light chain, ...
Authors:	Scharf, L, Bjorkman, P.J.
Deposit date:	2012-06-24
Release date:	2012-11-14
Last modified:	2021-05-19
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies. Proc.Natl.Acad.Sci.USA, 109, 2012

2K46

Xenopus laevis malectin complexed with nigerose (Glcalpha1-3Glc)
Descriptor:	MGC80075 protein, alpha-D-glucopyranose-(1-3)-alpha-D-glucopyranose
Authors:	Schallus, T.
Deposit date:	2008-05-28
Release date:	2008-08-12
Last modified:	2024-05-01
Method:	SOLUTION NMR
Cite:	Malectin: A Novel Carbohydrate-binding Protein of the Endoplasmic Reticulum and a Candidate Player in the Early Steps of Protein N-Glycosylation Mol.Cell.Biol., 19, 2008

4FQC

Crystal Structure of PGT121 Fab Bound to a complex-type sialylated N-glycan
Descriptor:	Fab heavy chain, Fab light chain, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:	Scharf, L, Bjorkman, P.J.
Deposit date:	2012-06-25
Release date:	2012-11-14
Last modified:	2021-05-19
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies. Proc.Natl.Acad.Sci.USA, 109, 2012

4FQQ

Crystal Structure of Germline Antibody PGT121-GL Fab
Descriptor:	Fab heavy chain, Fab light chain, SODIUM ION
Authors:	Scharf, L, Bjorkman, P.J.
Deposit date:	2012-06-25
Release date:	2012-11-14
Last modified:	2021-05-19
Method:	X-RAY DIFFRACTION (2.42 Å)
Cite:	Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies. Proc.Natl.Acad.Sci.USA, 109, 2012

7XP0

Crystal structure of PmiR from Pseudomonas aeruginosa
Descriptor:	Probable transcriptional regulator, SULFATE ION, ZINC ION
Authors:	Zhang, Y.X, Liang, H.H, Gan, J.H.
Deposit date:	2022-05-02
Release date:	2023-04-12
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.61 Å)
Cite:	PmiR senses 2-methylisocitrate levels to regulate bacterial virulence in Pseudomonas aeruginosa. Sci Adv, 8, 2022

4EJN

Crystal structure of autoinhibited form of AKT1 in complex with N-(4-(5-(3-acetamidophenyl)-2-(2-aminopyridin-3-yl)-3H-imidazo[4,5-b]pyridin-3-yl)benzyl)-3-fluorobenzamide
Descriptor:	1,2-ETHANEDIOL, 2-BUTANOL, N-(4-{5-[3-(acetylamino)phenyl]-2-(2-aminopyridin-3-yl)-3H-imidazo[4,5-b]pyridin-3-yl}benzyl)-3-fluorobenzamide, ...
Authors:	Eathiraj, S.
Deposit date:	2012-04-06
Release date:	2012-05-23
Last modified:	2013-01-02
Method:	X-RAY DIFFRACTION (2.19 Å)
Cite:	Discovery and optimization of a series of 3-(3-phenyl-3H-imidazo[4,5-b]pyridin-2-yl)pyridin-2-amines: orally bioavailable, selective, and potent ATP-independent Akt inhibitors. J.Med.Chem., 55, 2012

6K4L

Crystal structure of Se-labelled SidJ complex with CaM at 2.95 A
Descriptor:	CALCIUM ION, CHLORIDE ION, Calmodulin-1, ...
Authors:	Ouyang, S.Y.
Deposit date:	2019-05-24
Release date:	2019-07-24
Last modified:	2019-08-28
Method:	X-RAY DIFFRACTION (2.949 Å)
Cite:	Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase. Nature, 572, 2019

4GU4

Crystal structure of the T1L reovirus attachment protein sigma1 in complex with alpha-2,3-sialyllactose
Descriptor:	N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Outer capsid protein sigma-1
Authors:	Reiss, K, Stehle, T.
Deposit date:	2012-08-29
Release date:	2012-12-05
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (3.5 Å)
Cite:	The GM2 Glycan Serves as a Functional Coreceptor for Serotype 1 Reovirus. Plos Pathog., 8, 2012

2LL4

HADDOCK structure of TgMIC4-A5/lacto-N-biose complex, based on NOE-derived distance restraints
Descriptor:	Micronemal protein 4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:	Cowper, B, Matthews, S.
Deposit date:	2011-10-26
Release date:	2012-04-04
Last modified:	2020-07-29
Method:	SOLUTION NMR
Cite:	Galactose Recognition by the Apicomplexan Parasite Toxoplasma gondii. J.Biol.Chem., 287, 2012

7X0Y

Cryo-EM Structure of Arabidopsis CRY2 tetramer in complex with CIB1 fragment
Descriptor:	CIB1 fragment, Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
Authors:	Hao, Y.H, Zhang, X, Zhang, P.
Deposit date:	2022-02-22
Release date:	2023-01-04
Last modified:	2024-06-26
Method:	ELECTRON MICROSCOPY (3.89 Å)
Cite:	Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling. Plant Commun., 4, 2023

7X0X

Cryo-EM Structure of Arabidopsis CRY2 in active conformation
Descriptor:	Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
Authors:	Hao, Y.H, Zhang, X, Zhang, P.
Deposit date:	2022-02-22
Release date:	2023-01-04
Last modified:	2024-06-26
Method:	ELECTRON MICROSCOPY (2.56 Å)
Cite:	Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling. Plant Commun., 4, 2023

2LBO

Eimeria tenella microneme protein 3 MAR_B domain
Descriptor:	Microneme protein 3
Authors:	Lai, L, Garnett, J, Simpson, P, Matthews, S.
Deposit date:	2011-04-05
Release date:	2011-11-16
Last modified:	2024-05-01
Method:	SOLUTION NMR
Cite:	The Role of Sialyl Glycan Recognition in Host Tissue Tropism of the Avian Parasite Eimeria tenella Plos Pathog., 7, 2011

7X88

Crystal structure of ENL YEATS domain T2 mutant in complex with histone H3 acetylation at K27
Descriptor:	CITRIC ACID, Histone H3K27ac(24-27) peptide, Protein ENL
Authors:	Li, Y.Y, Li, H.T.
Deposit date:	2022-03-11
Release date:	2023-01-18
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.25 Å)
Cite:	Hotspot mutations in the structured ENL YEATS domain link aberrant transcriptional condensates and cancer. Mol.Cell, 82, 2022

6K4R

Crystal structure of SidJ-CaM-AMP ternary complex at 3.11 A
Descriptor:	ADENOSINE MONOPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
Authors:	Ouyang, S.Y.
Deposit date:	2019-05-26
Release date:	2019-07-24
Last modified:	2024-03-27
Method:	X-RAY DIFFRACTION (3.109 Å)
Cite:	Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase. Nature, 572, 2019

6K4K

Crystal structure of SidJ-CaM binary complex at 2.71 A
Descriptor:	CALCIUM ION, Calmodulin-1, SidJ
Authors:	Ouyang, S.Y.
Deposit date:	2019-05-24
Release date:	2019-07-24
Last modified:	2024-03-27
Method:	X-RAY DIFFRACTION (2.715 Å)
Cite:	Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase. Nature, 572, 2019

2LL3

The solution structure of TgMIC4 apple-5 domain
Descriptor:	Micronemal protein 4
Authors:	Cowper, B, Matthews, S.
Deposit date:	2011-10-26
Release date:	2012-04-04
Last modified:	2023-06-14
Method:	SOLUTION NMR
Cite:	Galactose Recognition by the Apicomplexan Parasite Toxoplasma gondii. J.Biol.Chem., 287, 2012

4HJU

Transthyretin in complex with (E)-N-(3-(4-hydroxy-3,5-dimethylstyryl)phenyl)acrylamide
Descriptor:	N-{3-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]phenyl}prop-2-enamide, Transthyretin
Authors:	Connelly, S, Wilson, I.A.
Deposit date:	2012-10-14
Release date:	2013-12-04
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.35 Å)
Cite:	Stilbene vinyl sulfonamides as fluorogenic sensors of and traceless covalent kinetic stabilizers of transthyretin that prevent amyloidogenesis. J.Am.Chem.Soc., 135, 2013

4HJT

Kinetic stabilization of transthyretin through covalent modification of K15 by (E)-N-(4-(4-hydroxy-3,5-dimethylstyryl)phenyl)propionamide
Descriptor:	N-{4-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]phenyl}propanamide, Transthyretin
Authors:	Connelly, S, Wilson, I.A.
Deposit date:	2012-10-14
Release date:	2013-12-04
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.45 Å)
Cite:	Stilbene vinyl sulfonamides as fluorogenic sensors of and traceless covalent kinetic stabilizers of transthyretin that prevent amyloidogenesis. J.Am.Chem.Soc., 135, 2013

2NP9

Crystal structure of a dioxygenase in the Crotonase superfamily
Descriptor:	DpgC, OXYGEN MOLECULE, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:	Bruner, S.D, Widboom, P.F, Fielding, E.N.
Deposit date:	2006-10-26
Release date:	2007-05-22
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.45 Å)
Cite:	Structural basis for cofactor-independent dioxygenation in vancomycin biosynthesis. Nature, 447, 2007

4HJS

Kinetic stabilization of transthyretin through covalent modification of K15 by (E)-N-(4-(4-hydroxy-3,5-dimethylstyryl)ethanesulfonamide
Descriptor:	N-{4-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]phenyl}ethanesulfonamide, Transthyretin
Authors:	Connelly, S, Wilson, I.A.
Deposit date:	2012-10-14
Release date:	2013-12-04
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (1.22 Å)
Cite:	Stilbene vinyl sulfonamides as fluorogenic sensors of and traceless covalent kinetic stabilizers of transthyretin that prevent amyloidogenesis. J.Am.Chem.Soc., 135, 2013

4HJO

Crystal structure of the inactive EGFR tyrosine kinase domain with erlotinib
Descriptor:	Epidermal growth factor receptor, [6,7-BIS(2-METHOXY-ETHOXY)QUINAZOLINE-4-YL]-(3-ETHYNYLPHENYL)AMINE
Authors:	Park, J.H, Lemmon, M.A.
Deposit date:	2012-10-13
Release date:	2012-11-14
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.75 Å)
Cite:	Erlotinib binds both inactive and active conformations of the EGFR tyrosine kinase domain. Biochem.J., 448, 2012

2M50

Analysis of the structural and molecular basis of voltage-sensitive sodium channel inhibition by the spider toxin, Huwentoxin-IV (-TRTX-Hh2a).
Descriptor:	Mu-theraphotoxin-Hh2a
Authors:	Gibbs, A, Minassian, N, Flinspach, M, Wickenden, A.
Deposit date:	2013-02-12
Release date:	2013-06-19
Last modified:	2023-11-29
Method:	SOLUTION NMR
Cite:	Analysis of the Structural and Molecular Basis of Voltage-sensitive Sodium Channel Inhibition by the Spider Toxin Huwentoxin-IV ( mu-TRTX-Hh2a). J.Biol.Chem., 288, 2013

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