Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1S1N
DownloadVisualize
BU of 1s1n by Molmil
SH3 domain of human nephrocystin
Descriptor: Nephrocystin 1
Authors:Le Maire, A, Weber, T, Saunier, S, Antignac, C, Ducruix, A, Dardel, F.
Deposit date:2004-01-07
Release date:2005-01-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of the SH3 domain of human nephrocystin and analysis of a mutation-causing juvenile nephronophthisis.
Proteins, 59, 2005
7QAA
DownloadVisualize
BU of 7qaa by Molmil
Crystal structure of RARalpha/RXRalpha ligand binding domain heterodimer in complex with BMS614 and oleic acid
Descriptor: 4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2']BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID, Isoform Alpha-1-deltaBC of Retinoic acid receptor alpha, OLEIC ACID, ...
Authors:le Maire, A, Vivat, V, Guee, L, Blanc, P, Malosse, C, Chamot-Rooke, J, Germain, P, Bourguet, w.
Deposit date:2021-11-16
Release date:2022-10-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Design and in vitro characterization of RXR variants as tools to investigate the biological role of endogenous rexinoids.
J.Mol.Endocrinol., 69, 2022
2YIW
DownloadVisualize
BU of 2yiw by Molmil
triazolopyridine inhibitors of p38 kinase
Descriptor: 1-(3-tert-butyl-1-phenyl-1H-pyrazol-5-yl)-3-(2-{[3-(1-methylethyl)[1,2,4]triazolo[4,3-a]pyridin-6-yl]sulfanyl}benzyl)urea, 2-fluoro-4-[4-(4-fluorophenyl)-1H-pyrazol-3-yl]pyridine, MITOGEN-ACTIVATED PROTEIN KINASE 14
Authors:Millan, D.S, Anderson, M, Bunnage, M.E, Burrows, J.L, Butcher, K.J, Dodd, P.G, Evans, T.J, Fairman, D.A, Hughes, S.J, Irving, S.L, Kilty, I.C, Lemaitre, A, Lewthwaite, R.A, Mahnke, A, Mathais, J.P, Philip, J, Phillips, C, Smith, R.T, Stefamiak, M.H, Yeadon, M.
Deposit date:2011-05-17
Release date:2011-11-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Synthesis of Inhaled P38 Inhibitors for the Treatment of Chronic Obstructive Pulmonary Disease.
J.Med.Chem., 54, 2011
7PDQ
DownloadVisualize
BU of 7pdq by Molmil
Crystal structure of a mutated form of RXRalpha ligand binding domain in complex with LG100268 and a coactivator fragment
Descriptor: 6-[1-(3,5,5,8,8-PENTAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)CYCLOPROPYL]PYRIDINE-3-CARBOXYLIC ACID, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:le Maire, A, Bourguet, W, Guee, L.
Deposit date:2021-08-06
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Design and in vitro characterization of RXR variants as tools to investigate the biological role of endogenous rexinoids.
J.Mol.Endocrinol., 69, 2022
7PDT
DownloadVisualize
BU of 7pdt by Molmil
Crystal structure of a mutated form of RXRalpha ligand binding domain in complex with BMS649 and a coactivator fragment
Descriptor: 4-[2-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL)-[1,3]DIOXOLAN-2-YL]-BENZOIC ACID, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:le Maire, A, Bourguet, W, Guee, L.
Deposit date:2021-08-07
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Design and in vitro characterization of RXR variants as tools to investigate the biological role of endogenous rexinoids.
J.Mol.Endocrinol., 69, 2022
2VE7
DownloadVisualize
BU of 2ve7 by Molmil
Crystal structure of a bonsai version of the human Ndc80 complex
Descriptor: GLYCEROL, KINETOCHORE PROTEIN HEC1, KINETOCHORE PROTEIN SPC25, ...
Authors:Ciferri, C, Pasqualato, S, Dos Reis, G, Screpanti, E, Maiolica, A, Polka, J, De Luca, J.G, De Wulf, P, Salek, M, Rappsilber, J, Moores, C.A, Salmon, E.D, Musacchio, A.
Deposit date:2007-10-17
Release date:2008-05-13
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Implications for Kinetochore-Microtubule Attachment from the Structure of an Engineered Ndc80 Complex
Cell(Cambridge,Mass.), 133, 2008
2YIX
DownloadVisualize
BU of 2yix by Molmil
Triazolopyridine Inhibitors of p38
Descriptor: 1-ethyl-3-(2-{[3-(1-methylethyl)[1,2,4]triazolo[4,3-a]pyridin-6-yl]sulfanyl}benzyl)urea, MITOGEN-ACTIVATED PROTEIN KINASE 14
Authors:Millan, D.S, Anderson, M, Bunnage, M.E, Burrows, J.L, Butcher, K.J, Dodd, P.G, Evans, T.J, Fairman, D.A, Han, s, Hughes, S.J, Irving, S.L, Kilty, I.C, Lemaitre, A, Lewthawaite, R.A, Mahke, A, Marr, E, Mathias, J.P, Philip, J, Phillips, C, Smith, R.T, Stefaniak, M.H, Yeadon, M.
Deposit date:2011-05-17
Release date:2011-11-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design and Synthesis of Inhaled P38 Inhibitors for the Treatment of Chronic Obstructive Pulmonary Disease.
J.Med.Chem., 54, 2011
2YIS
DownloadVisualize
BU of 2yis by Molmil
triazolopyridine inhibitors of p38 kinase.
Descriptor: 1-[3-tert-butyl-1-(3-chloro-4-hydroxyphenyl)-1H-pyrazol-5-yl]-3-{2-[(3-{2-[(2-hydroxyethyl)sulfanyl]phenyl}[1,2,4]triazolo[4,3-a]pyridin-6-yl)sulfanyl]benzyl}urea, 2-fluoro-4-[4-(4-fluorophenyl)-1H-pyrazol-3-yl]pyridine, MITOGEN-ACTIVATED PROTEIN KINASE 14
Authors:Millan, D.S, Anderson, M, Bazin, R, Bunnage, M.E, Burrows, J.L, Butcher, K.J, Dodd, P.G, Evans, T.J, Fairman, D.A, Hughes, S.J, Irving, S.L, Kilty, I.C, Lemaitre, A, Lewthwaite, R.A, Mahnke, A, Mathais, J.P, Philip, J, Phillips, C, Smith, R.T, Stefaniack, M.H, Yeadon, M.
Deposit date:2011-05-16
Release date:2011-11-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Synthesis of Inhaled P38 Inhibitors for the Treatment of Chronic Obstructive Pulmonary Disease.
J.Med.Chem., 54, 2011
6AN1
DownloadVisualize
BU of 6an1 by Molmil
Crystal structure of the complex between PPARgamma LBD and the ligand AM-879
Descriptor: 4-({2-[(1,3-dioxo-1,3-dihydro-2H-inden-2-ylidene)methyl]phenoxy}methyl)benzoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Veras, H, Figueira, A.C, le Maire, A.
Deposit date:2017-08-11
Release date:2018-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.687 Å)
Cite:Screening for PPAR Non-Agonist Ligands Followed by Characterization of a Hit, AM-879, with Additional No-Adipogenic and cdk5-Mediated Phosphorylation Inhibition Properties.
Front Endocrinol (Lausanne), 9, 2018
3E94
DownloadVisualize
BU of 3e94 by Molmil
Crystal structure of RXRalpha ligand binding domain in complex with tributyltin and a coactivator fragment
Descriptor: ACETATE ION, Nuclear receptor coactivator 2 peptide, Retinoic acid receptor RXR-alpha, ...
Authors:Bourguet, W, Le Maire, A.
Deposit date:2008-08-21
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Activation of RXR-PPAR heterodimers by organotin environmental endocrine disruptors
Embo Rep., 10, 2009
4TQX
DownloadVisualize
BU of 4tqx by Molmil
Molecular Basis of Streptococcus mutans Sortase A Inhibition by Chalcone.
Descriptor: ACETIC ACID, SULFATE ION, Sortase, ...
Authors:Wallock-Richards, D.J, Marles-Wright, J, Clarke, D.J, Maitra, A, Dodds, M, Hanley, B, Campopiano, D.J.
Deposit date:2014-06-12
Release date:2015-05-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Molecular basis of Streptococcus mutans sortase A inhibition by the flavonoid natural product trans-chalcone.
Chem.Commun.(Camb.), 51, 2015
2CKK
DownloadVisualize
BU of 2ckk by Molmil
High resolution crystal structure of the human kin17 C-terminal domain containing a kow motif
Descriptor: ACETATE ION, IODIDE ION, KIN17
Authors:le Maire, A, Schiltz, M, Pinon-Lataillade, G, Stura, E, Couprie, J, Gondry, M, Angulo-Mora, J, Zinn-Justin, S.
Deposit date:2006-04-20
Release date:2006-10-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Tandem of SH3-Like Domains Participates in RNA Binding in Kin17, a Human Protein Activated in Response to Genotoxics.
J.Mol.Biol., 364, 2006
6ET8
DownloadVisualize
BU of 6et8 by Molmil
Crystal structure of AlbA in complex with albicidin
Descriptor: Albicidin resistance protein, SULFATE ION, albicidin
Authors:Driller, R, Rostock, L, Alings, C, Graetz, S, Suessmuth, R, Mainz, A, Wahl, M.C, Loll, B.
Deposit date:2017-10-25
Release date:2018-08-15
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular insights into antibiotic resistance - how a binding protein traps albicidin.
Nat Commun, 9, 2018
2V1N
DownloadVisualize
BU of 2v1n by Molmil
SOLUTION STRUCTURE OF THE REGION 51-160 OF HUMAN KIN17 REVEALS A WINGED HELIX FOLD
Descriptor: PROTEIN KIN HOMOLOG
Authors:Carlier, L, Le Maire, A, Gondry, M, Guilhaudis, L, Milazzo, I, Davoust, D, Couprie, J, Gilquin, B, Zinn-Justin, S.
Deposit date:2007-05-27
Release date:2007-11-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Region 51-160 of Human Kin17 Reveals an Atypical Winged Helix Domain
Protein Sci., 16, 2007
7DFY
DownloadVisualize
BU of 7dfy by Molmil
Novel motif for left-handed G-quadruplex formation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2xMotif2, POTASSIUM ION, ...
Authors:Das, P, Winnerdy, F.R, Maity, A, Mechulam, Y, Phan, A.T.
Deposit date:2020-11-10
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:A novel minimal motif for left-handed G-quadruplex formation.
Chem.Commun.(Camb.), 57, 2021
7D5D
DownloadVisualize
BU of 7d5d by Molmil
Left-handed G-quadruplex containing one bulge
Descriptor: 1xBulge-LHG4motif, POTASSIUM ION, SPERMINE
Authors:Das, P, Ngo, K.H, Winnerdy, F.R, Maity, A, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2020-09-25
Release date:2021-02-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7D5E
DownloadVisualize
BU of 7d5e by Molmil
Left-handed G-quadruplex containing two bulges
Descriptor: 2xBulge-LHG4motif, POTASSIUM ION, SODIUM ION, ...
Authors:Das, P, Maity, A, Ngo, K.H, Winnerdy, F.R, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2020-09-25
Release date:2021-02-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.296 Å)
Cite:Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7D5F
DownloadVisualize
BU of 7d5f by Molmil
Left-handed G-quadruplex containing 3 bulges
Descriptor: 3xBulge-LHG4motif
Authors:Winnerdy, F.R, Das, P, Ngo, K.H, Maity, A, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2020-09-25
Release date:2021-02-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
6JCE
DownloadVisualize
BU of 6jce by Molmil
NMR solution and X-ray crystal structures of a DNA containing both right-and left-handed parallel-stranded G-quadruplexes
Descriptor: 29-mer DNA
Authors:Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2019-01-28
Release date:2019-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res., 47, 2019
8AGH
DownloadVisualize
BU of 8agh by Molmil
BK Polyomavirus VP1 mutant E73A
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
8AGO
DownloadVisualize
BU of 8ago by Molmil
BK Polyomavirus VP1 mutant E73Q
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
8AH0
DownloadVisualize
BU of 8ah0 by Molmil
BK Polyomavirus VP1 mutant VQQ
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
8AH1
DownloadVisualize
BU of 8ah1 by Molmil
BK Polyomavirus VP1 mutant N-Q
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
4IYE
DownloadVisualize
BU of 4iye by Molmil
Crystal structure of AdTx1 (rho-Da1a) from eastern green mamba (Dendroaspis angusticeps)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Toxin AdTx1
Authors:Stura, E.A, Vera, L, Maiga, A.A, Marchetti, C, Lorphelin, A, Bellanger, L, Servant, D, Gilles, N.
Deposit date:2013-01-28
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Crystallization of recombinant green mamba rho-Da1a toxin during a lyophilization procedure and its structure determination.
Acta Crystallogr.,Sect.F, 69, 2013
7RUW
DownloadVisualize
BU of 7ruw by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-7859
Descriptor: 2-(2-amino-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-N-(3-chloropyridin-4-yl)acetamide, B-cell lymphoma 6 protein, CHLORIDE ION, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-7859
To Be Published

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon