7A3Y
 
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6GH0
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6SX6
 | | Guanine-rich oligonucleotide with 5'-GC end form G-quadruplex with A(GGGG)A hexad, GCGC- and G-quartets and two symmetric GG and AA base pairs | | Descriptor: | GCn | | Authors: | Pavc, D, Wang, B, Spindler, L, Drevensek-Olenik, I, Plavec, J, Sket, P. | | Deposit date: | 2019-09-25 | | Release date: | 2020-07-22 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | GC ends control topology of DNA G-quadruplexes and their cation-dependent assembly.
Nucleic Acids Res., 48, 2020
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6SYK
 | | Guanine-rich oligonucleotide with 5'- and 3'-GC ends form G-quadruplex with A(GGGG)A hexad, GCGC- and G-quartets and two symmetric GG and AA base pair | | Descriptor: | GCnCG | | Authors: | Pavc, D, Wang, B, Spindler, L, Drevensek-Olenik, I, Plavec, J, Sket, P. | | Deposit date: | 2019-09-30 | | Release date: | 2020-07-29 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | GC ends control topology of DNA G-quadruplexes and their cation-dependent assembly.
Nucleic Acids Res., 48, 2020
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6SX3
 | | Intercalation of heterocyclic ligand between quartets in G-rich tetrahelical structure | | Descriptor: | VK2, ~{N}2,~{N}6-bis(1-methylquinolin-1-ium-3-yl)pyridine-2,6-dicarboxamide | | Authors: | Kotar, A, Kocman, V, Plavec, J. | | Deposit date: | 2019-09-24 | | Release date: | 2019-12-11 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Intercalation of a Heterocyclic Ligand between Quartets in a G-Rich Tetrahelical Structure.
Chemistry, 26, 2020
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9GDM
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5OPH
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2N2D
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5M1W
 | | Structure of a stable G-hairpin | | Descriptor: | DNA (5'-D(*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*G)-3') | | Authors: | Gajarsky, M, Zivkovic, M.L, Stadlbauer, P, Pagano, B, Fiala, R, Amato, J, Tomaska, L, Sponer, J, Plavec, J, Trantirek, L. | | Deposit date: | 2016-10-11 | | Release date: | 2017-03-01 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Structure of a Stable G-Hairpin.
J. Am. Chem. Soc., 139, 2017
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5NYT
 | | M2 G-quadruplex 20 wt% ethylene glycol | | Descriptor: | DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') | | Authors: | Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N. | | Deposit date: | 2017-05-11 | | Release date: | 2018-04-11 | | Last modified: | 2024-06-19 | | Method: | SOLUTION NMR | | Cite: | Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations.
Nucleic Acids Res., 46, 2018
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5NYS
 | | M2 G-quadruplex dilute solution | | Descriptor: | DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') | | Authors: | Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N. | | Deposit date: | 2017-05-11 | | Release date: | 2018-04-11 | | Last modified: | 2024-06-19 | | Method: | SOLUTION NMR | | Cite: | Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations.
Nucleic Acids Res., 46, 2018
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5NYU
 | | M2 G-quadruplex 10 wt% PEG8000 | | Descriptor: | DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') | | Authors: | Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N. | | Deposit date: | 2017-05-11 | | Release date: | 2018-04-11 | | Last modified: | 2024-06-19 | | Method: | SOLUTION NMR | | Cite: | Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations.
Nucleic Acids Res., 46, 2018
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5O4D
 | | G-quadruplex of Human papillomavirus type 52 | | Descriptor: | DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*AP*GP*GP*GP*GP*AP*CP*AP*CP*AP*GP*GP*GP*T)-3') | | Authors: | Marusic, M, Plavec, J. | | Deposit date: | 2017-05-29 | | Release date: | 2018-06-13 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Towards Understanding of Polymorphism of the G-rich Region of Human Papillomavirus Type 52.
Molecules, 24, 2019
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2LV1
 | | Solution-state NMR structure of prion protein mutant V210I at neutral pH | | Descriptor: | Major prion protein | | Authors: | Biljan, I, Ilc, G, Giachin, G, Legname, G, Plavec, J. | | Deposit date: | 2012-06-26 | | Release date: | 2012-09-19 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | Structural Rearrangements at Physiological pH: Nuclear Magnetic Resonance Insights from the V210I Human Prion Protein Mutant.
Biochemistry, 51, 2012
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2MAE
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2MVK
 | | Solution structure of phosphorylated cytosolic part of Trop2 | | Descriptor: | Tumor-associated calcium signal transducer 2 | | Authors: | Ilc, G, Plavec, J, Vidmar, T, Pavsic, M, Lenarcic, B. | | Deposit date: | 2014-10-08 | | Release date: | 2015-05-06 | | Last modified: | 2023-06-14 | | Method: | SOLUTION NMR | | Cite: | The cytosolic tail of the tumor marker protein Trop2--a structural switch triggered by phosphorylation.
Sci Rep, 5, 2015
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2MVL
 | | Solution structure of cytosolic part of Trop2 | | Descriptor: | Tumor-associated calcium signal transducer 2 | | Authors: | Ilc, G, Plavec, J, Vidmar, T, Pavsic, M, Lenarcic, B. | | Deposit date: | 2014-10-08 | | Release date: | 2015-05-06 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | The cytosolic tail of the tumor marker protein Trop2--a structural switch triggered by phosphorylation.
Sci Rep, 5, 2015
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2N8Y
 | | Holo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1 | | Descriptor: | Alpha-actinin-1, CALCIUM ION | | Authors: | Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K. | | Deposit date: | 2015-10-28 | | Release date: | 2016-06-29 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016
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2N8Z
 | | Apo form of Calmodulin-Like Domain of Human Non-Muscle alpha-actinin 1 | | Descriptor: | Alpha-actinin-1 | | Authors: | Drmota Prebil, S, Slapsak, U, de Almeida Ribeiro, E, Pavsic, M, Ilc, G, Zielinska, K, Hartl, M, Backman, L, Plavec, J, Lenarcic, B, Djinovic-Carugo, K. | | Deposit date: | 2015-10-28 | | Release date: | 2016-06-29 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Structure and calcium-binding studies of calmodulin-like domain of human non-muscle alpha-actinin-1.
Sci Rep, 6, 2016
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5LIG
 | | G-Quadruplex formed at the 5'-end of NHEIII_1 Element in human c-MYC promoter bound to triangulenium based fluorescence probe DAOTA-M2 | | Descriptor: | 8,12-bis(2-morpholinoethyl)-8H-benzo[ij]xantheno[1,9,8-cdef][2,7]naphthyridin-12-iumhexafluorophosphate, DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3') | | Authors: | Kotar, A, Wang, B, Shivalingam, A, Gonzalez-Garcia, J, Vilar, R, Plavec, J. | | Deposit date: | 2016-07-14 | | Release date: | 2016-09-14 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | NMR Structure of a Triangulenium-Based Long-Lived Fluorescence Probe Bound to a G-Quadruplex.
Angew.Chem.Int.Ed.Engl., 55, 2016
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5LQG
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5M1L
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5M4W
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5LKN
 | | NMR solution structure of human FNIII domain 2 of NCAM | | Descriptor: | Neural cell adhesion molecule 1 | | Authors: | Slapsak, U, Salzano, G, Amin, L, Abskharon, R.N.N, Ilc, G, Zupancic, B, Biljan, I, Plavec, J, Giachin, G, Legname, G. | | Deposit date: | 2016-07-22 | | Release date: | 2016-09-14 | | Last modified: | 2024-06-19 | | Method: | SOLUTION NMR | | Cite: | The N Terminus of the Prion Protein Mediates Functional Interactions with the Neuronal Cell Adhesion Molecule (NCAM) Fibronectin Domain.
J.Biol.Chem., 291, 2016
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5MTA
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