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8DTK
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BU of 8dtk by Molmil
Structure of RBD directed antibody DH1047 in complex with SARS-CoV-2 spike: Local refinement of RBD-Fab interace
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DH1047 Fab Heavy Chain, DH1047 Fab Light Chain, ...
Authors:May, A.J, Manne, K, Acharya, P.
Deposit date:2022-07-25
Release date:2023-08-02
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Broadly neutralizing antibody induction by non-stabilized SARS-CoV-2 Spike mRNA vaccination in nonhuman primates.
Biorxiv, 2023
8EUS
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BU of 8eus by Molmil
Crystal structure of NPC1 luminal domain C
Descriptor: NPC intracellular cholesterol transporter 1
Authors:Odongo, L, Pornillos, O.
Deposit date:2022-10-19
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Purification and structure of luminal domain C of human Niemann-Pick C1 protein.
Acta Crystallogr.,Sect.F, 79, 2023
1PYP
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BU of 1pyp by Molmil
X-RAY DIFFRACTION STUDY OF INORGANIC PYROPHOSPHATASE FROM BAKER,S YEAST AT THE 3 ANGSTROMS RESOLUTION (RUSSIAN)
Descriptor: INORGANIC PYROPHOSPHATASE
Authors:Harutyunyan, E.H, Terzyan, S.S, Vainshtein, B.K.
Deposit date:1983-02-03
Release date:1983-10-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-Ray Diffraction Study of Inorganic Pyrophosphatase from Baker,S Yeast at the 3 Angstroms Resolution (Russian)
Dokl.Akad.Nauk Sssr, 258, 1981
6XS6
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BU of 6xs6 by Molmil
SARS-CoV-2 Spike D614G variant, minus RBD
Descriptor: Spike glycoprotein
Authors:Wang, X, Egri, S.B, Dudkina, N, Luban, J, Shen, K.
Deposit date:2020-07-15
Release date:2020-07-22
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural and Functional Analysis of the D614G SARS-CoV-2 Spike Protein Variant.
Cell, 183, 2020
1CLL
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BU of 1cll by Molmil
CALMODULIN STRUCTURE REFINED AT 1.7 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, CALMODULIN, ETHANOL
Authors:Chattopadhyaya, R, Quiocho, F.A.
Deposit date:1992-09-29
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Calmodulin structure refined at 1.7 A resolution.
J.Mol.Biol., 228, 1992
7ZW6
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BU of 7zw6 by Molmil
Oligomeric structure of SynDLP
Descriptor: Slr0869 protein
Authors:Gewehr, L, Junglas, B, Jilly, R, Franz, J, Wenyu, E.Z, Weidner, T, Bonn, M, Sachse, C, Schneider, D.
Deposit date:2022-05-18
Release date:2023-04-19
Last modified:2023-04-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:SynDLP is a dynamin-like protein of Synechocystis sp. PCC 6803 with eukaryotic features.
Nat Commun, 14, 2023
8AYV
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BU of 8ayv by Molmil
Crystal structure of the Malonyl-ACP Decarboxylase MadB from Pseudomonas putida
Descriptor: YiiD_C domain-containing protein
Authors:Zahn, M, Kuatsjah, E, Beckham, G.T, McGeehan, J.E.
Deposit date:2022-09-03
Release date:2023-03-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.044 Å)
Cite:Initiation of fatty acid biosynthesis in Pseudomonas putida KT2440.
Metab Eng, 76, 2023
8FOL
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BU of 8fol by Molmil
The structure of a crystallizable variant of E. coli pyruvate formate-lyase activating enzyme bound to SAM, alternate crystal form
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, POTASSIUM ION, ...
Authors:Moody, J.D, Saxton, A.J, Galambas, A, Lawrence, C.M, Broderick, J.B.
Deposit date:2022-12-31
Release date:2023-05-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Computational engineering of previously crystallized pyruvate formate-lyase activating enzyme reveals insights into SAM binding and reductive cleavage.
J.Biol.Chem., 299, 2023
8FSI
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BU of 8fsi by Molmil
The structure of a crystallizable variant of E. coli pyruvate formate-lyase activating enzyme bound to SAM
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, POTASSIUM ION, ...
Authors:Moody, J.D, Galambas, A, Lawrence, C.M, Broderick, J.B.
Deposit date:2023-01-10
Release date:2023-05-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Computational engineering of previously crystallized pyruvate formate-lyase activating enzyme reveals insights into SAM binding and reductive cleavage.
J.Biol.Chem., 299, 2023
8FO0
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BU of 8fo0 by Molmil
The structure of a crystallizable variant of E. coli pyruvate formate-lyase activating enzyme bound to a partially cleaved SAM molecule
Descriptor: IRON/SULFUR CLUSTER, POTASSIUM ION, Pyruvate formate-lyase 1-activating enzyme, ...
Authors:Moody, J.D, Saxton, A.J, Galambas, A, Lawrence, C.M, Broderick, J.B.
Deposit date:2022-12-29
Release date:2023-05-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Computational engineering of previously crystallized pyruvate formate-lyase activating enzyme reveals insights into SAM binding and reductive cleavage.
J.Biol.Chem., 299, 2023
8FF2
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BU of 8ff2 by Molmil
Amyloid-beta (1-40) fibrils derived from a CAA patient
Descriptor: Amyloid-beta precursor protein
Authors:Crooks, E.J, Fu, Z, Chowdhury, S, Smith, S.O.
Deposit date:2022-12-07
Release date:2023-12-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:An electrostatic cluster guides A beta 40 fibril formation in sporadic and Dutch-type cerebral amyloid angiopathy.
J.Struct.Biol., 216, 2024
8FF3
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BU of 8ff3 by Molmil
Amyloid-beta (1-40) fibrils derived from familial Dutch-type CAA patient (population B)
Descriptor: Amyloid-beta precursor protein
Authors:Crooks, E.J, Fu, Z, Chowdury, S, Smith, S.O.
Deposit date:2022-12-07
Release date:2023-12-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:An electrostatic cluster guides A beta 40 fibril formation in sporadic and Dutch-type cerebral amyloid angiopathy.
J.Struct.Biol., 216, 2024
5LDH
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BU of 5ldh by Molmil
STRUCTURE OF THE ACTIVE TERNARY COMPLEX OF PIG HEART LACTATE DEHYDROGENASE WITH S-LAC-NAD AT 2.7 ANGSTROMS RESOLUTION
Descriptor: (3S)-5-(3-CARBOXY-3-HYDROXYPROPYL) NICOTINAMIDE-ADENINE-DINUCLEOTIDE, CITRIC ACID, LACTATE DEHYDROGENASE
Authors:Grau, U.M, Rossmann, M.G.
Deposit date:1980-10-29
Release date:1981-03-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the active ternary complex of pig heart lactate dehydrogenase with S-lac-NAD at 2.7 A resolution.
J.Mol.Biol., 151, 1981
1PRW
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BU of 1prw by Molmil
Crystal structure of bovine brain Ca++ calmodulin in a compact form
Descriptor: CALCIUM ION, Calmodulin
Authors:Fallon, J.L, Quiocho, F.A.
Deposit date:2003-06-20
Release date:2003-10-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A closed compact structure of native ca(2+)-calmodulin.
Structure, 11, 2003
1THM
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BU of 1thm by Molmil
CRYSTAL STRUCTURE OF THERMITASE AT 1.4 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, SODIUM ION, SULFATE ION, ...
Authors:Teplyakov, A.V, Kuranova, I.P, Harutyunyan, E.H.
Deposit date:1992-02-24
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of thermitase at 1.4 A resolution.
J.Mol.Biol., 214, 1990
6VTU
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BU of 6vtu by Molmil
DH717.1 Fab monomer in complex with man9 glycan
Descriptor: DH717.1 heavy chain, DH717.1 light chain, GLYCEROL, ...
Authors:Fera, D, Bronkema, N.
Deposit date:2020-02-13
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies.
Cell, 184, 2021
6W5Y
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BU of 6w5y by Molmil
Inferred receptor binding domain of human endogenous retrovirus envelope EnvP(b)1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, EnvP(b)1 inferred receptor binding domain, ...
Authors:McCarthy, K.R.
Deposit date:2020-03-14
Release date:2020-11-11
Last modified:2021-05-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Receptor Binding Domain of EnvP(b)1, an Endogenous Retroviral Envelope Protein Expressed in Human Tissues.
Mbio, 11, 2020
6WKW
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BU of 6wkw by Molmil
EM structure of CtBP2 with a minimal dehydrogenase domain of CtBP2
Descriptor: C-terminal-binding protein 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Jecrois, A.M.
Deposit date:2020-04-17
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of CtBP2 confirms tetrameric architecture.
Structure, 29, 2021
8OOJ
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BU of 8ooj by Molmil
Crystal structure of dCK C4S-S74E mutant in complex with EdC and UDP
Descriptor: 4-azanyl-1-[(2~{R},4~{S},5~{R})-5-ethynyl-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]pyrimidin-2-one, Deoxycytidine kinase, URIDINE-5'-DIPHOSPHATE
Authors:Saez-Ayala, M, Rebuffet, E, Betzi, S, Morelli, X.
Deposit date:2023-04-05
Release date:2023-12-20
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:4'-Ethynyl-2'-Deoxycytidine (EdC) Preferentially Targets Lymphoma and Leukemia Subtypes by Inducing Replicative Stress.
Mol.Cancer Ther., 23, 2024
6WML
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BU of 6wml by Molmil
Human TLR8 bound to the potent agonist, GS-9688 (Selgantolimod)
Descriptor: (2R)-2-[(2-amino-7-fluoropyrido[3,2-d]pyrimidin-4-yl)amino]-2-methylhexan-1-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 8, ...
Authors:Appleby, T.C, Perry, J.K, Mish, M, Villasenor, A.G, Mackman, R.L.
Deposit date:2020-04-21
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of GS-9688 (Selgantolimod) as a Potent and Selective Oral Toll-Like Receptor 8 Agonist for the Treatment of Chronic Hepatitis B.
J.Med.Chem., 63, 2020
6XRJ
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BU of 6xrj by Molmil
Crystal structure of the disulfide linked DH717.1 Fab dimer, derived from a macaque HIV-1 vaccine-induced Env glycan-reactive neutralizing antibody B cell lineage
Descriptor: DH717.1 heavy chain Fab fragment, DH717.1 light chain Fab fragment
Authors:Manne, K, Nicely, N.I, Acharya, P.
Deposit date:2020-07-13
Release date:2020-12-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies.
Cell, 184, 2021
1AGA
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BU of 1aga by Molmil
THE AGAROSE DOUBLE HELIX AND ITS FUNCTION IN AGAROSE GEL STRUCTURE
Descriptor: beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose
Authors:Arnott, S.
Deposit date:1978-05-23
Release date:1980-03-28
Last modified:2024-02-07
Method:FIBER DIFFRACTION (3 Å)
Cite:The agarose double helix and its function in agarose gel structure.
J.Mol.Biol., 90, 1974
1CAR
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BU of 1car by Molmil
I-CARRAGEENAN. MOLECULAR STRUCTURE AND PACKING OF POLYSACCHARIDE DOUBLE HELICES IN ORIENTED FIBRES OF DIVALENT CATION SALTS
Descriptor: 4-O-sulfo-beta-D-galactopyranose-(1-4)-3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose-(1-4)-3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose-(1-4)-3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose
Authors:Arnott, S.
Deposit date:1978-05-23
Release date:1980-03-28
Last modified:2024-02-07
Method:FIBER DIFFRACTION (3 Å)
Cite:Iota-carrageenan: molecular structure and packing of polysaccharide double helices in oriented fibres of divalent cation salts.
J.Mol.Biol., 90, 1974
4UTC
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BU of 4utc by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN E, ...
Authors:Kikuti, C, Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
4UTB
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BU of 4utb by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 A11
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11, ...
Authors:Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015

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