SARS-CoV-2 Spike D614G variant, minus RBD

Summary for 6XS6

EMDB information22301
DescriptorSpike glycoprotein (1 entity in total)
Functional Keywordssars-cov-2, spike, d614g, viral protein
Biological sourceSevere acute respiratory syndrome coronavirus 2 (2019-nCoV)
Total number of polymer chains3
Total molecular weight417775.03
Wang, X.,Egri, S.B.,Dudkina, N.,Luban, J.,Shen, K. (deposition date: 2020-07-15, release date: 2020-07-22)
Primary citation
Yurkovetskiy, L.,Wang, X.,Pascal, K.E.,Tompkins-Tinch, C.,Nyalile, T.,Wang, Y.,Baum, A.,Diehl, W.E.,Dauphin, A.,Carbone, C.,Veinotte, K.,Egri, S.B.,Schaffner, S.F.,Lemieux, J.E.,Munro, J.,Rafique, A.,Barve, A.,Sabeti, P.C.,Kyratsous, C.,Dudkina, N.,Shen, K.,Luban, J.
Structural and Functional Analysis of the D614G SARS-CoV-2 Spike Protein Variant
Biorxiv, 2020
DOI: 10.1101/2020.07.04.187757v2
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliers40 0.1%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures
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PDB entries from 2020-08-12