Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5K6A
DownloadVisualize
BU of 5k6a by Molmil
Trypanosoma brucei Pteridine reductase 1 (PTR1) in complex with compound 1
Descriptor: (2~{R})-2-(3-hydroxyphenyl)-6-oxidanyl-2,3-dihydrochromen-4-one, ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Landi, G, Pozzi, C, Di Pisa, F, Dello lacono, L, Mangani, S.
Deposit date:2016-05-24
Release date:2017-03-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Chroman-4-One Derivatives Targeting Pteridine Reductase 1 and Showing Anti-Parasitic Activity.
Molecules, 22, 2017
6FDG
DownloadVisualize
BU of 6fdg by Molmil
Novel crystal structure of DHNA-CoA Thioesterase from Staphylococcus aureus
Descriptor: 4-hydroxybenzoyl-CoA thioesterase
Authors:Murad, A.M, Betzel, C, Wrenger, C.
Deposit date:2017-12-22
Release date:2018-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Novel crystal structure of DHNA-CoA Thioesterase from Staphylococcus aureus
To Be Published
6TNN
DownloadVisualize
BU of 6tnn by Molmil
Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-09
Release date:2020-09-30
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
6TEL
DownloadVisualize
BU of 6tel by Molmil
Crystal structure of Dot1L in complex with an inhibitor (compound 10).
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-79 specific, POTASSIUM ION, ...
Authors:Scheufler, C, Stauffer, F, Be, C, Moebitz, H.
Deposit date:2019-11-12
Release date:2019-12-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:New Potent DOT1L Inhibitors forin VivoEvaluation in Mouse.
Acs Med.Chem.Lett., 10, 2019
6KZ6
DownloadVisualize
BU of 6kz6 by Molmil
Crystal structure of ASFV dUTPase
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, E165R, MAGNESIUM ION
Authors:Guo, Y, Chen, C, Li, G.B, Cao, L, Wang, C.W.
Deposit date:2019-09-23
Release date:2019-11-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:Structural Insight into African Swine Fever Virus dUTPase Reveals a Novel Folding Pattern in the dUTPase Family.
J.Virol., 94, 2020
4UTN
DownloadVisualize
BU of 4utn by Molmil
Crystal structure of zebrafish Sirtuin 5 in complex with succinylated CPS1-peptide
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Pannek, M, Gertz, M, Steegborn, C.
Deposit date:2014-07-21
Release date:2014-08-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors.
Angew.Chem.Int.Ed.Engl., 53, 2014
6TEN
DownloadVisualize
BU of 6ten by Molmil
Crystal structure of Dot1L in complex with an inhibitor (compound 11).
Descriptor: 3-[(4-azanyl-6-methoxy-1,3,5-triazin-2-yl)amino]-4-[[(~{S})-[2,2-bis(fluoranyl)-1,3-benzodioxol-4-yl]-(3-chloranylpyridin-2-yl)methyl]amino]benzenesulfonamide, Histone-lysine N-methyltransferase, H3 lysine-79 specific, ...
Authors:Scheufler, C, Stauffer, F, Be, C, Moebitz, H.
Deposit date:2019-11-12
Release date:2019-12-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:New Potent DOT1L Inhibitors forin VivoEvaluation in Mouse.
Acs Med.Chem.Lett., 10, 2019
6TPQ
DownloadVisualize
BU of 6tpq by Molmil
RNase M5 bound to 50S ribosome with precursor 5S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-13
Release date:2020-09-30
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
6ZI7
DownloadVisualize
BU of 6zi7 by Molmil
Crystal structure of OleP-oleandolide(DEO) bound to L-rhamnose
Descriptor: (3~{R},4~{S},5~{R},6~{S},7~{S},9~{S},11~{R},12~{S},13~{R},14~{R})-3,5,7,9,11,13,14-heptamethyl-4,6,12-tris(oxidanyl)-1-oxacyclotetradecane-2,10-dione, Cytochrome P-450, FORMIC ACID, ...
Authors:Montemiglio, L.C, Savino, C, Vallone, B, Parisi, G, Freda, I.
Deposit date:2020-06-25
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
2IAX
DownloadVisualize
BU of 2iax by Molmil
Crystal structure of squid ganglion DFPase D232S mutant
Descriptor: CALCIUM ION, Diisopropylfluorophosphatase
Authors:Katsemi, V, Luecke, C, Koepke, J, Loehr, F, Maurer, S, Fritzsch, G, Rueterjans, H.
Deposit date:2006-09-08
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Mutational and structural studies of the diisopropylfluorophosphatase from Loligo vulgaris shed new light on the catalytic mechanism of the enzyme
Biochemistry, 44, 2005
8I9L
DownloadVisualize
BU of 8i9l by Molmil
Structure of C3a-C3aR-Go complex (Composite map)
Descriptor: Antibody fragment - ScFv16, C3a anaphylatoxin, C3a anaphylatoxin chemotactic receptor, ...
Authors:Yadav, M.K, Yadav, R, Maharana, J, Sarma, P, Banerjee, R, Shukla, A.K, Gati, C.
Deposit date:2023-02-07
Release date:2023-10-18
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Molecular basis of anaphylatoxin binding, activation, and signaling bias at complement receptors.
Cell, 186, 2023
2IAP
DownloadVisualize
BU of 2iap by Molmil
Crystal structure of squid ganglion DFPase E21Q mutant
Descriptor: CALCIUM ION, Diisopropylfluorophosphatase
Authors:Scharff, E.I, Koepke, J, Fritzsch, G, Luecke, C, Rueterjans, H.
Deposit date:2006-09-08
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of diisopropylfluorophosphatase from Loligo vulgaris
Structure, 9, 2001
2IAU
DownloadVisualize
BU of 2iau by Molmil
Crystal structure of squid ganglion DFPase W244Y mutant
Descriptor: CALCIUM ION, Diisopropylfluorophosphatase
Authors:Scharff, E.I, Koepke, J, Fritzsch, G, Luecke, C, Rueterjans, H.
Deposit date:2006-09-08
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of diisopropylfluorophosphatase from Loligo vulgaris
Structure, 9, 2001
8I95
DownloadVisualize
BU of 8i95 by Molmil
Structure of EP54-C3aR-Go complex
Descriptor: Antibody fragment - ScFv16, C3a anaphylatoxin chemotactic receptor, EP54 ligand, ...
Authors:Yadav, M.K, Yadav, R, Maharana, J, Sarma, P, Banerjee, R, Shukla, A.K, Gati, C.
Deposit date:2023-02-06
Release date:2023-10-18
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Molecular basis of anaphylatoxin binding, activation, and signaling bias at complement receptors.
Cell, 186, 2023
8I97
DownloadVisualize
BU of 8i97 by Molmil
Structure of Apo-C3aR-Go complex (Glacios)
Descriptor: Antibody fragment - ScFv16, C3a anaphylatoxin chemotactic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Yadav, M.K, Yadav, R, Maharana, J, Sarma, P, Banerjee, R, Shukla, A.K, Gati, C.
Deposit date:2023-02-06
Release date:2023-10-18
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Molecular basis of anaphylatoxin binding, activation, and signaling bias at complement receptors.
Cell, 186, 2023
8I9A
DownloadVisualize
BU of 8i9a by Molmil
Structure of EP54-C3aR-Gq complex
Descriptor: Antibody fragment - ScFv16, C3a anaphylatoxin chemotactic receptor, EP54 ligand, ...
Authors:Yadav, M.K, Yadav, R, Maharana, J, Sarma, P, Banerjee, R, Shukla, A.K, Gati, C.
Deposit date:2023-02-06
Release date:2023-10-18
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Molecular basis of anaphylatoxin binding, activation, and signaling bias at complement receptors.
Cell, 186, 2023
8I9S
DownloadVisualize
BU of 8i9s by Molmil
Structure of Apo-C3aR-Go complex (Titan)
Descriptor: Antibody fragment - ScFv16, C3a anaphylatoxin chemotactic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Yadav, M.K, Yadav, R, Maharana, J, Sarma, P, Banerjee, R, Shukla, A.K, Gati, C.
Deposit date:2023-02-07
Release date:2023-10-18
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Molecular basis of anaphylatoxin binding, activation, and signaling bias at complement receptors.
Cell, 186, 2023
8IA2
DownloadVisualize
BU of 8ia2 by Molmil
Structure of C5a bound human C5aR1 in complex with Go (Composite map)
Descriptor: Antibody fragment - ScFv16, C5a anaphylatoxin, C5a anaphylatoxin chemotactic receptor 1, ...
Authors:Yadav, M.K, Yadav, R, Maharana, J, Banerjee, R, Shukla, A.K, Gati, C.
Deposit date:2023-02-07
Release date:2023-10-18
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Molecular basis of anaphylatoxin binding, activation, and signaling bias at complement receptors.
Cell, 186, 2023
2I6Z
DownloadVisualize
BU of 2i6z by Molmil
X-ray diffraction studies of adducts between anticancer platinum drugs and hen egg white lysozyme
Descriptor: CHLORIDE ION, Cisplatin, DIMETHYL SULFOXIDE, ...
Authors:Temperini, C, Casini, A, Messori, L.
Deposit date:2006-08-30
Release date:2007-01-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:ESI mass spectrometry and X-ray diffraction studies of adducts between anticancer platinum drugs and hen egg white lysozyme.
Chem.Commun.(Camb.), 2007
4W9Q
DownloadVisualize
BU of 4w9q by Molmil
The Fk1 domain of FKBP51 in complex with (1S,5S,6R)-10-[(3,5-dichlorophenyl)sulfonyl]-3-[2-(3,4-dimethoxyphenoxy)ethyl]-5-ethyl-3,10-diazabicyclo[4.3.1]decan-2-one
Descriptor: (1S,5S,6R)-10-[(3,5-dichlorophenyl)sulfonyl]-3-[2-(3,4-dimethoxyphenoxy)ethyl]-5-ethyl-3,10-diazabicyclo[4.3.1]decan-2-one, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Pomplun, S, Wang, Y, Kirschner, K, Kozany, C, Bracher, A, Hausch, F.
Deposit date:2014-08-27
Release date:2014-12-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Rational Design and Asymmetric Synthesis of Potent and Neurotrophic Ligands for FK506-Binding Proteins (FKBPs).
Angew.Chem.Int.Ed.Engl., 54, 2015
8HOK
DownloadVisualize
BU of 8hok by Molmil
crystal structure of UGT71AP2
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, UGT71AP2
Authors:Wang, Z.L, He, C, Li, F, Qiao, X, Ye, M.
Deposit date:2022-12-10
Release date:2023-12-13
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Functional characterization, structural basis, and protein engineering of a rare flavonoid 2'- O -glycosyltransferase from Scutellaria baicalensis .
Acta Pharm Sin B, 14, 2024
2I8L
DownloadVisualize
BU of 2i8l by Molmil
Solution Structure of an endopeptidase HycI from Escherichia coli
Descriptor: Hydrogenase 3 maturation protease
Authors:Yang, F, Hu, W, Jin, C.
Deposit date:2006-09-02
Release date:2006-12-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of an endopeptidase HycI from Escherichia coli: implications for mechanism of the [NiFe] hydrogenase maturation
J.Biol.Chem., 282, 2007
2HZ7
DownloadVisualize
BU of 2hz7 by Molmil
Crystal structure of the Glutaminyl-tRNA synthetase from Deinococcus radiodurans
Descriptor: Glutaminyl-tRNA synthetase
Authors:Deniziak, M, Sauter, C, Becker, H.D, Paulus, C, Giege, R, Kern, D.
Deposit date:2006-08-08
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Deinococcus glutaminyl-tRNA synthetase is a chimer between proteins from an ancient and the modern pathways of aminoacyl-tRNA formation
Nucleic Acids Res., 35, 2007
8HOJ
DownloadVisualize
BU of 8hoj by Molmil
Crystal structure of UGT71AP2 in complex with UDP
Descriptor: UGT71AP2, URIDINE-5'-DIPHOSPHATE
Authors:Wang, Z.L, He, C, Li, F, Qiao, X, Ye, M.
Deposit date:2022-12-10
Release date:2023-12-13
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Functional characterization, structural basis, and protein engineering of a rare flavonoid 2'- O -glycosyltransferase from Scutellaria baicalensis .
Acta Pharm Sin B, 14, 2024
1TZI
DownloadVisualize
BU of 1tzi by Molmil
Crystal Structure of the Fab YADS2 Complexed with h-VEGF
Descriptor: Fab YADS2 Heavy Chain, Fab YADS2 Light Chain, Vascular endothelial growth factor A
Authors:Fellouse, F.A, Wiesmann, C, Sidhu, S.S.
Deposit date:2004-07-10
Release date:2004-08-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Synthetic antibodies from a four-amino-acid code: A dominant role for tyrosine in antigen recognition
Proc.Natl.Acad.Sci.USA, 101, 2004

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon