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5DDP
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BU of 5ddp by Molmil
L-glutamine riboswitch bound with L-glutamine
Descriptor: GLUTAMINE, MAGNESIUM ION, RNA (61-MER), ...
Authors:Ren, A, Patel, D.J.
Deposit date:2015-08-25
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Cell Rep, 13, 2015
5CYJ
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BU of 5cyj by Molmil
X-ray structure of human RBPMS
Descriptor: RNA-binding protein with multiple splicing
Authors:Teplova, M, Farazi, T.A, Patel, D.J.
Deposit date:2015-07-30
Release date:2015-09-30
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural basis underlying CAC RNA recognition by the RRM domain of dimeric RNA-binding protein RBPMS.
Q. Rev. Biophys., 49, 2016
5ELH
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BU of 5elh by Molmil
Crystal structure of mouse Unkempt zinc fingers 1-3 (ZnF1-3), bound to RNA
Descriptor: RING finger protein unkempt homolog, RNA (5'-R(*UP*UP*AP*UP*U)-3'), SULFATE ION, ...
Authors:Teplova, M, Murn, J, Zarnack, K, Shi, Y, Patel, D.J.
Deposit date:2015-11-04
Release date:2015-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Recognition of distinct RNA motifs by the clustered CCCH zinc fingers of neuronal protein Unkempt.
Nat.Struct.Mol.Biol., 23, 2016
5ELK
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BU of 5elk by Molmil
Crystal structure of mouse Unkempt zinc fingers 4-6 (ZnF4-6), bound to RNA
Descriptor: RING finger protein unkempt homolog, RNA, ZINC ION
Authors:Teplova, M, Murn, J, Zarnack, K, Shi, Y, Patel, D.J.
Deposit date:2015-11-04
Release date:2015-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Recognition of distinct RNA motifs by the clustered CCCH zinc fingers of neuronal protein Unkempt.
Nat.Struct.Mol.Biol., 23, 2016
5DE5
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BU of 5de5 by Molmil
Crystal structure of the complex between human FMRP RGG motif and G-quadruplex RNA.
Descriptor: Fragile X mental retardation protein 1, POTASSIUM ION, sc1
Authors:Vasilyev, N, Polonskaia, A, Darnell, J.C, Darnell, R.B, Patel, D.J, Serganov, A.
Deposit date:2015-08-25
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.0011 Å)
Cite:Crystal structure reveals specific recognition of a G-quadruplex RNA by a beta-turn in the RGG motif of FMRP.
Proc.Natl.Acad.Sci.USA, 112, 2015
4DOW
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BU of 4dow by Molmil
Structure of mouse ORC1 BAH domain bound to H4K20me2
Descriptor: Histone H4, Origin recognition complex subunit 1
Authors:Song, J, Patel, D.J.
Deposit date:2012-02-10
Release date:2012-03-07
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier-Gorlin syndrome.
Nature, 484, 2012
5DUN
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BU of 5dun by Molmil
The crystal structure of OMe substituted twister ribozyme
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (54-MER)
Authors:Ren, A, Patel, D.J, Micura, R, Rajashankar, K.R.
Deposit date:2015-09-19
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:A Mini-Twister Variant and Impact of Residues/Cations on the Phosphodiester Cleavage of this Ribozyme Class.
Angew.Chem.Int.Ed.Engl., 54, 2015
2PIK
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BU of 2pik by Molmil
CALICHEAMICIN GAMMA1I-DNA COMPLEX, NMR, 6 STRUCTURES
Descriptor: 2,4-dideoxy-4-(ethylamino)-3-O-methyl-alpha-L-threo-pentopyranose-(1-2)-4-amino-4,6-dideoxy-beta-D-glucopyranose, 2,6-dideoxy-4-thio-beta-D-allopyranose, 3-O-methyl-alpha-L-rhamnopyranose, ...
Authors:Kumar, R.A, Ikemoto, N, Patel, D.J.
Deposit date:1996-12-31
Release date:1997-05-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the calicheamicin gamma 1I-DNA complex.
J.Mol.Biol., 265, 1997
4E8U
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BU of 4e8u by Molmil
Crystal structure of Arabidopsis IDN2 XS domain along with a small segment of adjacent coiled-coil region
Descriptor: Putative uncharacterized protein T8P19.180, SULFATE ION
Authors:Simanshu, D.K, Patel, D.J.
Deposit date:2012-03-20
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 109, 2012
4DA4
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BU of 4da4 by Molmil
Structure of mouse DNMT1 (731-1602) bound to hemimethylated CpG DNA
Descriptor: CITRIC ACID, DNA (cytosine-5)-methyltransferase 1, DNA_LOWER_STRAND, ...
Authors:Song, J, Patel, D.J.
Deposit date:2012-01-12
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure-Based Mechanistic Insights into DNMT1-Mediated Maintenance DNA Methylation.
Science, 335, 2012
4EN5
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BU of 4en5 by Molmil
Crystal structure of fluoride riboswitch, Tl-Acetate soaked
Descriptor: FLUORIDE ION, Fluoride riboswitch, MAGNESIUM ION, ...
Authors:Ren, A.M, Rajashankar, K.R, Patel, D.J.
Deposit date:2012-04-12
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.957 Å)
Cite:Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
4ENA
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BU of 4ena by Molmil
Crystal structure of fluoride riboswitch, soaked in Cs+
Descriptor: CESIUM ION, FLUORIDE ION, Fluoride riboswitch, ...
Authors:Ren, A.M, Rajashankar, K.R, Patel, D.J.
Deposit date:2012-04-12
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
4ENB
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BU of 4enb by Molmil
Crystal structure of fluoride riboswitch, bound to Iridium
Descriptor: FLUORIDE ION, Fluoride riboswitch, IRIDIUM HEXAMMINE ION, ...
Authors:Ren, A.M, Rajashankar, K.R, Patel, D.J.
Deposit date:2012-04-12
Release date:2012-05-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
4ENC
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BU of 4enc by Molmil
Crystal structure of fluoride riboswitch
Descriptor: FLUORIDE ION, Fluoride riboswitch, MAGNESIUM ION, ...
Authors:Ren, A.M, Rajashankar, K.R, Patel, D.J.
Deposit date:2012-04-12
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.272 Å)
Cite:Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch.
Nature, 486, 2012
3LD7
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BU of 3ld7 by Molmil
Crystal structure of the Lin0431 protein from Listeria innocua, Northeast Structural Genomics Consortium Target LkR112
Descriptor: Lin0431 protein
Authors:Vorobiev, S, Chen, Y, Lee, D, Patel, D.J, Ciccosanti, C, Sahdev, S, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-01-12
Release date:2010-01-26
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.547 Å)
Cite:Crystal structure of the Lin0431 protein from Listeria innocua
To be Published
3LPY
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BU of 3lpy by Molmil
Crystal structure of the RRM domain of CyP33
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Peptidyl-prolyl cis-trans isomerase E, SULFATE ION
Authors:Wang, Z, Patel, D.J.
Deposit date:2010-02-07
Release date:2010-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
146D
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BU of 146d by Molmil
SOLUTION STRUCTURE OF THE MITHRAMYCIN DIMER-DNA COMPLEX
Descriptor: 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE, 2,6-dideoxy-3-C-methyl-beta-D-ribo-hexopyranose-(1-3)-2,6-dideoxy-beta-D-galactopyranose-(1-3)-beta-D-Olivopyranose, DNA (5'-D(*TP*CP*GP*CP*GP*A)-3'), ...
Authors:Sastry, M, Patel, D.J.
Deposit date:1993-11-09
Release date:1995-03-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the mithramycin dimer-DNA complex.
Biochemistry, 32, 1993
3LML
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BU of 3lml by Molmil
Crystal Structure of the sheath tail protein Lin1278 from Listeria innocua, Northeast Structural Genomics Consortium Target LkR115
Descriptor: Lin1278 protein
Authors:Forouhar, F, Neely, H, Seetharaman, J, Mao, M, Xiao, R, Patel, D.J, Ciccosanti, C, Wang, H, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-01-31
Release date:2010-03-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Northeast Structural Genomics Consortium Target LkR115
To be Published
3LQH
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BU of 3lqh by Molmil
Crystal structure of MLL1 PHD3-Bromo in the free form
Descriptor: Histone-lysine N-methyltransferase MLL, ZINC ION
Authors:Wang, Z, Patel, D.J.
Deposit date:2010-02-09
Release date:2010-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3LQJ
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BU of 3lqj by Molmil
Crystal structure of MLL1 PHD3-Bromo complexed with H3(1-9)K4me3 peptide
Descriptor: Histone H3, MLL1 PHD3-Bromo, ZINC ION
Authors:Wang, Z, Patel, D.J.
Deposit date:2010-02-09
Release date:2010-07-07
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3LQI
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BU of 3lqi by Molmil
Crystal structure of MLL1 PHD3-Bromo complexed with H3(1-9)K4me2 peptide
Descriptor: Histone H3, MLL1 PHD3-Bromo, ZINC ION
Authors:Wang, Z, Patel, D.J.
Deposit date:2010-02-09
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3NMR
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BU of 3nmr by Molmil
Crystal Structure of CUGBP1 RRM1/2-RNA Complex
Descriptor: CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
Authors:Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
Deposit date:2010-06-22
Release date:2010-10-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3O35
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BU of 3o35 by Molmil
Crystal structure of TRIM24 PHD-Bromo complexed with H3(23-31)K27ac peptide
Descriptor: Histone H3.1, Transcription intermediary factor 1-alpha, ZINC ION
Authors:Wang, Z, Patel, D.J.
Deposit date:2010-07-23
Release date:2010-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010
3NNA
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BU of 3nna by Molmil
Crystal Structure of CUGBP1 RRM1/2-RNA Complex
Descriptor: CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
Authors:Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
Deposit date:2010-06-23
Release date:2010-10-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3O37
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BU of 3o37 by Molmil
Crystal structure of TRIM24 PHD-Bromo complexed with H3(1-10)K4 peptide
Descriptor: Histone H3.1, Transcription intermediary factor 1-alpha, ZINC ION
Authors:Wang, Z, Patel, D.J.
Deposit date:2010-07-23
Release date:2010-12-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010

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