2IZ9

MS2-RNA HAIRPIN (4ONE -5) COMPLEX

Replaces:  1DZS

Summary for 2IZ9

Related1AQ3 1AQ4 1BMS 1MSC 1MST 1MVA 1MVB 1U1Y 1ZDH 1ZDI 1ZDJ 1ZDK 1ZSE 2B2D 2B2E 2B2G 2BNY 2BQ5 2BS0 2BS1 2BU1 2C4Q 2C4Y 2C4Z 2C50 2C51 2MS2 5MSF 6MSF 7MSF 2IZ8 2IZM 2IZN
DescriptorMS2 COAT PROTEIN, 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*U ONEP *AP*CP*CP*CP*AP*UP*GP*U)-3' (3 entities in total)
Functional Keywordsvirus/rna, hairpin, capsid, levivirus, virus, complex (capsid protein-rna hairpin), virus-rna complex
Biological sourceENTEROBACTERIO PHAGE MS2
Cellular locationVirion  P03612
Total number of polymer chains5
Total molecular weight53306.73
Authors
Grahn, E.,Stonehouse, N.J.,Adams, C.J.,Fridborg, K.,Beigelman, L.,Matulic-Adamic, J.,Warriner, S.L.,Stockley, P.G.,Liljas, L. (deposition date: 2006-07-25, release date: 2006-07-27, Last modification date: 2018-01-17)
Primary citation
Grahn, E.,Stonehouse, N.J.,Adams, C.J.,Fridborg, K.,Beigelman, L.,Matulic-Adamic, J.,Warriner, S.L.,Stockley, P.G.,Liljas, L.
Deletion of a Single Hydrogen Bonding Atom from the MS2 RNA Operator Leads to Dramatic Rearrangements at the RNA-Coat Protein Interface
Nucleic Acids Res., 28:4611-, 2000
PubMed: 11095669 (PDB entries with the same primary citation)
DOI: 10.1093/NAR/28.23.4611
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.85 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRNA backbone61.3%4.4%0.47MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2iz9
no rotation
Molmil generated image of 2iz9
rotated about x axis by 90°
Molmil generated image of 2iz9
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 2iz9
no rotation
Molmil generated image of 2iz9
rotated about x axis by 90°
Molmil generated image of 2iz9
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2iz9.pdb1.gz [4.29 MB])