6MSF

F6 APTAMER MS2 COAT PROTEIN COMPLEX

Summary for 6MSF

DescriptorRNA (5'-R(*CP*CP*AP*CP*AP*GP*UP*CP*AP*CP*UP*GP*GP*G)-3'), RNA (5'-R(*CP*AP*GP*UP*CP*AP*CP*UP*GP*G)-3'), PROTEIN (MS2 PROTEIN CAPSID), ... (4 entities in total)
Functional Keywordsviral coat protein-rna complex, rna aptamer, rna stem loop, bacteriophage ms2, icosahedral virus, virus-rna complex, virus/rna
Biological sourceEnterobacterio phage MS2
Cellular locationVirion (Potential) P03612
Total number of polymer chains5
Total molecular weight48854.06
Authors
Convery, M.A.,Rowsell, S.,Stonehouse, N.J.,Ellington, A.D.,Hirao, I.,Murray, J.B.,Peabody, D.S.,Phillips, S.E.V.,Stockley, P.G. (deposition date: 1998-01-06, release date: 1998-07-08, Last modification date: 2011-07-13)
Primary citation
Convery, M.A.,Rowsell, S.,Stonehouse, N.J.,Ellington, A.D.,Hirao, I.,Murray, J.B.,Peabody, D.S.,Phillips, S.E.,Stockley, P.G.
Crystal structure of an RNA aptamer-protein complex at 2.8 A resolution.
Nat.Struct.Biol., 5:133-139, 1998
PubMed: 9461079 (PDB entries with the same primary citation)
DOI: 10.1038/nsb0298-133
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.8 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliersRNA backbone0.19480.5%6.6%2.9%0.53MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6msf
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Molmil generated image of 6msf
rotated about x axis by 90°
Molmil generated image of 6msf
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More Biological unit images

Molmil generated image of 6msf
no rotation
Molmil generated image of 6msf
rotated about x axis by 90°
Molmil generated image of 6msf
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6msf.pdb1.gz [4.11 MB])