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PDB形式変換不可の PDB エントリー
6TBV
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BU of 6tbv by Molmil
Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Herrero del Valle, A, Innis, C.A.
登録日2019-11-04
公開日2020-01-01
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Ornithine capture by a translating ribosome controls bacterial polyamine synthesis.
Nat Microbiol, 5, 2020
6TBY
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BU of 6tby by Molmil
Phycocyanobilin-adducted PAS-GAF bidomain of Sorghum bicolor phyB
分子名称: BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Nagano, S, Guan, K, Shenkutie, S.M, Hughes, J.E.
登録日2019-11-04
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into photoactivation and signalling in plant phytochromes.
Nat.Plants, 6, 2020
6TC3
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BU of 6tc3 by Molmil
Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Innis, C.A, Herrero del Valle, A.
登録日2019-11-05
公開日2020-01-01
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Ornithine capture by a translating ribosome controls bacterial polyamine synthesis.
Nat Microbiol, 5, 2020
6TC5
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BU of 6tc5 by Molmil
Phytochromobilin-adducted PAS-GAF bidomain of Sorghum bicolor phyB
分子名称: 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, BETA-MERCAPTOETHANOL, Phytochrome
著者Nagano, S, Guan, K, Shenkutie, S.M, Hughes, J.E.
登録日2019-11-05
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into photoactivation and signalling in plant phytochromes.
Nat.Plants, 6, 2020
6TC7
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BU of 6tc7 by Molmil
PAS-GAF bidomain of Glycine max phytochromeA
分子名称: DI(HYDROXYETHYL)ETHER, PHYCOCYANOBILIN, Phytochrome
著者Nagano, S, Guan, K, Shenkutie, S.M, Hughes, J.E.
登録日2019-11-05
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structural insights into photoactivation and signalling in plant phytochromes.
Nat.Plants, 6, 2020
6TCL
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BU of 6tcl by Molmil
Photosystem I tetramer
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Chen, M, Perez-Boerema, A, Li, S, Amunts, A.
登録日2019-11-06
公開日2020-02-19
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Distinct structural modulation of photosystem I and lipid environment stabilizes its tetrameric assembly.
Nat.Plants, 6, 2020
6TCX
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BU of 6tcx by Molmil
Papain bound to a natural cysteine protease inhibitor from Streptomyces mobaraensis
分子名称: (2~{R})-2-[[(1~{S})-1-[(6~{S})-2-azanyl-1,4,5,6-tetrahydropyrimidin-6-yl]-2-[[(2~{S})-3-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-phenyl-propan-2-yl]amino]butan-2-yl]amino]-2-oxidanylidene-ethyl]carbamoylamino]-3-(4-hydroxyphenyl)propanoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Papain
著者Kraemer, A, Juettner, N.E, Fuchsbauer, H.-L, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2019-11-06
公開日2019-12-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Decoding the Papain Inhibitor from Streptomyces mobaraensis as Being Hydroxylated Chymostatin Derivatives: Purification, Structure Analysis, and Putative Biosynthetic Pathway.
J.Nat.Prod., 83, 2020
6TCY
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BU of 6tcy by Molmil
X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with a inhibitor SS555
分子名称: 1,2-ETHANEDIOL, 2-METHOXYETHANOL, 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, ...
著者Stransky, J, Barinka, C.
登録日2019-11-06
公開日2020-11-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rational Design of Suprastat: A Novel Selective Histone Deacetylase 6 Inhibitor with the Ability to Potentiate Immunotherapy in Melanoma Models.
J.Med.Chem., 63, 2020
6TDU
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BU of 6tdu by Molmil
Cryo-EM structure of Euglena gracilis mitochondrial ATP synthase, full dimer, rotational states 1
分子名称: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Muhleip, A, Amunts, A.
登録日2019-11-10
公開日2019-11-27
実験手法ELECTRON MICROSCOPY (4.32 Å)
主引用文献Structure of a mitochondrial ATP synthase with bound native cardiolipin.
Elife, 8, 2019
6TEE
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BU of 6tee by Molmil
Crystal structure of monooxygenase RutA under anaerobic conditions.
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, Pyrimidine monooxygenase RutA
著者Saleem-Batcha, R, Matthews, A, Teufel, R.
登録日2019-11-11
公開日2020-02-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Aminoperoxide adducts expand the catalytic repertoire of flavin monooxygenases.
Nat.Chem.Biol., 16, 2020
6TEF
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BU of 6tef by Molmil
Crystal structure of monooxygenase RutA complexed with dioxygen under 0.5 MPa / 5 bars of oxygen pressure.
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, OXYGEN MOLECULE, ...
著者Saleem-Batcha, R, Matthews, A, Teufel, R.
登録日2019-11-11
公開日2020-02-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Aminoperoxide adducts expand the catalytic repertoire of flavin monooxygenases.
Nat.Chem.Biol., 16, 2020
6TEG
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BU of 6teg by Molmil
Crystal structure of monooxygenase RutA complexed with uracil and dioxygen under 1.5 MPa / 15 bars of oxygen pressure.
分子名称: FLAVIN MONONUCLEOTIDE, OXYGEN MOLECULE, Pyrimidine monooxygenase RutA, ...
著者Saleem-Batcha, R, Matthews, A, Teufel, R.
登録日2019-11-11
公開日2020-02-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Aminoperoxide adducts expand the catalytic repertoire of flavin monooxygenases.
Nat.Chem.Biol., 16, 2020
6TF9
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BU of 6tf9 by Molmil
Structure of the vertebrate gamma-Tubulin Ring Complex
分子名称: Actin, cytoplasmic 1, Belt helices 1,2,3,4, ...
著者Zupa, E, Pfeffer, S.
登録日2019-11-13
公開日2019-12-11
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Insights into the assembly and activation of the microtubule nucleator gamma-TuRC.
Nature, 578, 2020
6TG4
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BU of 6tg4 by Molmil
Tankyrase 2 in complex with an inhibitor (OM-1700)
分子名称: N-[3-[5-(5-ethoxypyridin-2-yl)-4-(2-fluorophenyl)-1,2,4-triazol-3-yl]cyclobutyl]pyridine-2-carboxamide, Tankyrase-2, ZINC ION
著者Sowa, S.T, Lehtio, L.
登録日2019-11-15
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Preclinical Lead Optimization of a 1,2,4-Triazole Based Tankyrase Inhibitor.
J.Med.Chem., 63, 2020
6TG8
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BU of 6tg8 by Molmil
Crystal structure of the Kelch domain in complex with 11 amino acid peptide (model of the ETGE loop)
分子名称: Kelch-like ECH-associated protein 1, SODIUM ION, VAL-ILE-ASN-PRO-GLU-THR-GLY-GLU-GLN-ILE-GLN
著者Kekez, I, Matic, S, Tomic, S, Matkovic-Calogovic, D.
登録日2019-11-15
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Binding of dipeptidyl peptidase III to the oxidative stress cell sensor Kelch-like ECH-associated protein 1 is a two-step process.
J.Biomol.Struct.Dyn., 39, 2021
6TGC
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BU of 6tgc by Molmil
CryoEM structure of the ternary DOCK2-ELMO1-RAC1 complex.
分子名称: Dedicator of cytokinesis protein 2, Engulfment and cell motility protein 1, Ras-related C3 botulinum toxin substrate 1
著者Chang, L, Yang, J, Chang, J.H, Zhang, Z, Boland, A, McLaughlin, S.H, Abu-Thuraia, A, Killoran, R.C, Smith, M.J, Cote, J.F, Barford, D.
登録日2019-11-15
公開日2020-07-29
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of the DOCK2-ELMO1 complex provides insights into regulation of the auto-inhibited state.
Nat Commun, 11, 2020
6TH6
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BU of 6th6 by Molmil
Cryo-EM Structure of T. kodakarensis 70S ribosome
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Matzov, D, Sas-Chen, A, Thomas, J.M, Santangelo, T, Meier, J.L, Schwartz, S, Shalev-Benami, M.
登録日2019-11-18
公開日2020-07-29
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
Nature, 583, 2020
6THY
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BU of 6thy by Molmil
Botulinum neurotoxin A3 Hc domain in complex with GD1a
分子名称: 1,2-ETHANEDIOL, ACETATE ION, BoNT/A3, ...
著者Gregory, K.S, Acharya, K.R, Liu, S.M.
登録日2019-11-21
公開日2020-01-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of botulinum neurotoxin subtype A3 cell binding domain in complex with GD1a co-receptor ganglioside.
Febs Open Bio, 10, 2020
6TIB
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BU of 6tib by Molmil
Structure of A. niger Fdc I327S variant in complex with 2 naphthoic acid
分子名称: DI(HYDROXYETHYL)ETHER, Ferulic acid decarboxylase 1, MANGANESE (II) ION, ...
著者Leys, D.
登録日2019-11-22
公開日2020-06-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Enzymatic C-H activation of aromatic compounds through CO 2 fixation.
Nat.Chem.Biol., 16, 2020
6TIC
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BU of 6tic by Molmil
Structure of A. niger Fdc I327S variant in complex with benzothiophene 2 carboxylic acid
分子名称: Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
著者Leys, D.
登録日2019-11-22
公開日2020-06-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.281 Å)
主引用文献Enzymatic C-H activation of aromatic compounds through CO 2 fixation.
Nat.Chem.Biol., 16, 2020
6TID
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BU of 6tid by Molmil
Structure of the N terminal domain of Bc2L-C lectin (1-131) in complex with H-type 1 antigen
分子名称: Lectin, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Varrot, A, Bermeo, R.
登録日2019-11-22
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.614 Å)
主引用文献BC2L-C N-Terminal Lectin Domain Complexed with Histo Blood Group Oligosaccharides Provides New Structural Information.
Molecules, 25, 2020
6TIE
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BU of 6tie by Molmil
Structure of A. niger Fdc I327S variant in complex with indol-2-carboxylic acid
分子名称: 1H-indole-2-carboxylic acid, Ferulic acid decarboxylase 1, MANGANESE (II) ION, ...
著者Leys, D.
登録日2019-11-22
公開日2020-06-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Enzymatic C-H activation of aromatic compounds through CO 2 fixation.
Nat.Chem.Biol., 16, 2020
6TIG
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BU of 6tig by Molmil
Structure of the N terminal domain of Bc2L-C lectin (1-131) in complex with Globo H (H-type 3) antigen
分子名称: Lectin, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose
著者Varrot, A, Bermeo, R.
登録日2019-11-22
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献BC2L-C N-Terminal Lectin Domain Complexed with Histo Blood Group Oligosaccharides Provides New Structural Information.
Molecules, 25, 2020
6TIH
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BU of 6tih by Molmil
Structure of A. niger Fdc WT in complex with benzothiophene 2 carboxylic acid
分子名称: Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
著者Leys, D.
登録日2019-11-22
公開日2020-06-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.021 Å)
主引用文献Enzymatic C-H activation of aromatic compounds through CO 2 fixation.
Nat.Chem.Biol., 16, 2020
6TII
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BU of 6tii by Molmil
Crystal structure of penicillin-binding protein 2 from Yersinia pestis
分子名称: BROMIDE ION, Peptidoglycan D,D-transpeptidase MrdA
著者Pankov, G, Hunter, W.N, Dawson, A.
登録日2019-11-22
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献The structure of penicillin-binding protein 2 from Yersinia pestis
To Be Published

222415

件を2024-07-10に公開中

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