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PDB形式変換不可の PDB エントリー
8VJ6
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GluA2 bound to GYKI-52466 and Glutamate, Inhibited State 1
分子名称: 4-[(5S,8R)-8-methyl-6,7,8,9-tetrahydro-2H,5H-[1,3]dioxolo[4,5-h][2,3]benzodiazepin-5-yl]aniline, Isoform Flip of Glutamate receptor 2
著者Hale, W.D, Montano Romero, A, Huganir, R.L, Twomey, E.C.
登録日2024-01-05
公開日2024-06-05
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Allosteric competition and inhibition in AMPA receptors.
Nat.Struct.Mol.Biol., 2024
8VJ7
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GluA2 bound to GYKI-52466 and Glutamate, Inhibited State 2
分子名称: 4-[(5S,8R)-8-methyl-6,7,8,9-tetrahydro-2H,5H-[1,3]dioxolo[4,5-h][2,3]benzodiazepin-5-yl]aniline, GLUTAMIC ACID, Isoform Flip of Glutamate receptor 2
著者Hale, W.D, Montano Romero, A, Huganir, R.L, Twomey, E.C.
登録日2024-01-05
公開日2024-06-05
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.85 Å)
主引用文献Allosteric competition and inhibition in AMPA receptors.
Nat.Struct.Mol.Biol., 2024
8VJJ
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Structure of mouse RyR1 (EGTA-only dataset)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ...
著者Weninger, G, Marks, A.R.
登録日2024-01-07
公開日2024-01-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Structural insights into the regulation of RyR1 by S100A1.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VJK
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Structure of mouse RyR1 (high-Ca2+/CFF/ATP dataset)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
著者Weninger, G, Marks, A.R.
登録日2024-01-07
公開日2024-01-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Structural insights into the regulation of RyR1 by S100A1.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VJP
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Histidine-covalent stapled alpha-helical peptide (155H1) targeting hMcl-1
分子名称: (4Z)-oct-4-en-1-ol, (S~1~R)-3-carbamoyl-4-methoxybenzene-1-sulfinic acid, Histidine-covalent stapled alpha-helical peptide, ...
著者Muzzarelli, K.M, Assar, Z, Alboreggia, G, Pellecchia, M.
登録日2024-01-07
公開日2024-05-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Histidine-Covalent Stapled Alpha-Helical Peptides Targeting hMcl-1.
J.Med.Chem., 67, 2024
8VK3
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Structure of mouse RyR1 in complex with S100A1 (EGTA-only dataset)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Peptidyl-prolyl cis-trans isomerase FKBP1A, Protein S100A1, ...
著者Weninger, G, Marks, A.R.
登録日2024-01-08
公開日2024-01-24
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structural insights into the regulation of RyR1 by S100A1.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VK4
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Structure of mouse RyR1 in complex with S100A1 (high-Ca2+/CFF/ATP dataset)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
著者Weninger, G, Marks, A.R.
登録日2024-01-08
公開日2024-02-07
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural insights into the regulation of RyR1 by S100A1.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VKQ
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CW Flagellar Switch Complex - FliF, FliG, FliM, and FliN forming the C-ring from Salmonella
分子名称: Flagellar M-ring protein, Flagellar motor switch protein FliG, Flagellar motor switch protein FliM, ...
著者Singh, P.K, Iverson, T.M.
登録日2024-01-09
公開日2024-02-28
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis for rotation and directional switching by the combined MS- and C-rings of bacterial flagella.
To Be Published
8VKR
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CW Flagellar Switch Complex with extra density - FliF, FliG, FliM, and FliN forming the C-ring from Salmonella
分子名称: Flagellar M-ring protein, Flagellar motor switch protein FliG, Flagellar motor switch protein FliM, ...
著者Singh, P.K, Iverson, T.M.
登録日2024-01-09
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural basis for rotation and directional switching by the combined MS- and C-rings of bacterial flagella.
To Be Published
8VKU
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Structure of VCP in complex with an ATPase activator (D2 domains only, hexameric form)
分子名称: (3R)-N-[2-(ethylsulfanyl)phenyl]-3-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)butanamide, Transitional endoplasmic reticulum ATPase
著者Jones, N.H, Urnivicius, L, Kapoor, T.M.
登録日2024-01-09
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Allosteric activation of VCP, an AAA unfoldase, by small molecule mimicry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VKZ
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Crystal structure of Glucocorticoid Receptor in complex with an inhibitor
分子名称: (4aR,4bS,5R,6aS,6bS,8R,9aR,10aR,10bR)-8-{4-[(3-aminophenyl)methyl]phenyl}-5-hydroxy-6b-(hydroxyacetyl)-4a,6a-dimethyl-4a,4b,5,6,6a,6b,9a,10,10a,10b,11,12-dodecahydro-2H,8H-naphtho[2',1':4,5]indeno[1,2-d][1,3]dioxol-2-one, Glucocorticoid receptor, Nuclear receptor coactivator 2
著者Judge, R.A, Hobson, A.D.
登録日2024-01-10
公開日2024-01-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.133 Å)
主引用文献Minimising the payload solvent exposed hydrophobic surface area optimises the antibody-drug conjugate properties.
Rsc Med Chem, 15, 2024
8VL7
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Co-crystal structure of human TREX1 in complex with an inhibitor
分子名称: (2P)-2-[3-bromo-2-(2-hydroxyethoxy)phenyl]-5-hydroxy-1-methyl-N-(1,2-oxazol-4-yl)-6-oxo-1,6-dihydropyrimidine-4-carboxamide, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Dehghani-Tafti, S, Dong, A, Li, Y, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L.
登録日2024-01-11
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Co-crystal structure of human TREX1 in complex with an inhibitor
To be published
8VL9
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Crystal structure of EloBC-VHL-CDO1 complex bound to compound 8 molecular glue
分子名称: CITRIC ACID, Cysteine dioxygenase type 1, Elongin-B, ...
著者Shu, W, Ma, X, Tutter, A, Buckley, D, Golosov, A, Michaud, G.
登録日2024-01-11
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A small molecule VHL molecular glue degrader for cysteine dioxygenase 1
To Be Published
8VLG
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Cryo-EM structure of human HGSNAT bound with Acetyl-CoA and substrate analog
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-methyl-2-oxo-2H-1-benzopyran-7-yl 2-amino-2-deoxy-beta-D-glucopyranoside, ...
著者Li, F, Zhao, B.
登録日2024-01-11
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural and mechanistic insights into a lysosomal membrane enzyme HGSNAT involved in Sanfilippo syndrome
To Be Published
8VLI
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Cryo-EM structure of human HGSNAT bound with CoA and product analog
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-methyl-2-oxo-2H-1-benzopyran-7-yl 2-acetamido-2-deoxy-beta-D-glucopyranoside, ...
著者Li, F, Zhao, B.
登録日2024-01-11
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural and mechanistic insights into a lysosomal membrane enzyme HGSNAT involved in Sanfilippo syndrome
To Be Published
8VLQ
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Structure of PmHMGR bound to mevalonate, CoA and NAD 5 minutes after reaction initiation at pH 9
分子名称: (R)-MEVALONATE, (R)-mevaldehyde, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
著者Purohit, V, Steussy, C.N, Stauffacher, C.V.
登録日2024-01-12
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献pH-dependent reaction triggering in PmHMGR crystals for time-resolved crystallography.
Biophys.J., 123, 2024
8VLS
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Structure of VCP in complex with an ATPase activator (D2 domains only, dodecameric form)
分子名称: (3R)-N-[2-(ethylsulfanyl)phenyl]-3-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)butanamide, Transitional endoplasmic reticulum ATPase
著者Jones, N.H, Urnivicius, L, Kapoor, T.M.
登録日2024-01-12
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Allosteric activation of VCP, an AAA unfoldase, by small molecule mimicry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VLX
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HTT in complex with HAP40 and a small molecule.
分子名称: 40-kDa huntingtin-associated protein, Huntingtin, N-[(1S,2R)-2-benzylcyclopentyl]-N'-{1-[(1S)-1-(pyridin-4-yl)ethyl]piperidin-4-yl}urea
著者Poweleit, N, Boudet, J, Doherty, E.
登録日2024-01-12
公開日2024-03-06
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Discovery of a Small Molecule Ligand to the Huntingtin/HAP40 complex
To Be Published
8VOV
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Structure of VCP in complex with an ATPase activator and ADP (D2 domains only, hexameric form)
分子名称: (3R)-N-[2-(ethylsulfanyl)phenyl]-3-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)butanamide, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Jones, N.H, Urnivicius, L, Kapoor, T.M.
登録日2024-01-16
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Allosteric activation of VCP, an AAA unfoldase, by small molecule mimicry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VQ3
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CDK2-CyclinE1 in complex with allosteric inhibitor I-198.
分子名称: (8R)-N-[(2S,3R)-3-(cyclohexylmethoxy)-1-(morpholin-4-yl)-1-oxobutan-2-yl]-2-[(1S)-2,2-dimethylcyclopropane-1-carbonyl]-6-(1,3-thiazole-5-carbonyl)-2,6-diazaspiro[3.4]octane-8-carboxamide, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
著者Hirschi, M, Johnson, E, Zhang, Y, Liu, Z, Brodsky, O, Won, S.J, Nagata, A, Petroski, M.D, Majmudar, J.D, Niessen, S, VanArsdale, T, Gilbert, A.M, Hayward, M.M, Stewart, A.E, Nager, A.R, Melillo, B, Cravatt, B.
登録日2024-01-17
公開日2024-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Expanding the ligandable proteome by paralog hopping with covalent probes.
Biorxiv, 2024
8VQ4
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CDK2-CyclinE1 in complex with allosteric inhibitor I-125A.
分子名称: (8R)-6-(1-benzyl-1H-pyrazole-4-carbonyl)-N-[(2S,3R)-3-(2-cyclohexylethoxy)-1-(methylamino)-1-oxobutan-2-yl]-2-[(1S)-2,2-dimethylcyclopropane-1-carbonyl]-2,6-diazaspiro[3.4]octane-8-carboxamide, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
著者Hirschi, M, Johnson, E, Zhang, Y, Liu, Z, Brodsky, O, Won, S.J, Nagata, A, Petroski, M.D, Majmudar, J.D, Niessen, S, VanArsdale, T, Gilbert, A.M, Hayward, M.M, Stewart, A.E, Nager, A.R, Melillo, B, Cravatt, B.
登録日2024-01-17
公開日2024-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Expanding the ligandable proteome by paralog hopping with covalent probes.
Biorxiv, 2024
8VQL
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Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with small molecule 6S prime
分子名称: (S~1~S,3S)-N-{3,5-dichloro-4-[(2S)-2-phenylmorpholine-4-carbonyl]phenyl}-3-(dimethylamino)pyrrolidine-1-sulfonimidoyl fluoride, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, T.H, Zhu, Y, Wilson, I.A.
登録日2024-01-18
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Ultrapotent influenza hemagglutinin fusion inhibitors developed through SuFEx-enabled high-throughput medicinal chemistry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VQM
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Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with small molecule 6R prime
分子名称: (S~1~S,3R)-N-{3,5-dichloro-4-[(2S)-2-phenylmorpholine-4-carbonyl]phenyl}-3-(dimethylamino)pyrrolidine-1-sulfonimidoyl fluoride, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lin, T.H, Zhu, Y, Wilson, I.A.
登録日2024-01-18
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Ultrapotent influenza hemagglutinin fusion inhibitors developed through SuFEx-enabled high-throughput medicinal chemistry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VQN
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Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with small molecule 6R
分子名称: (S~1~S,3R)-N-{3-chloro-4-[(2S)-2-phenylmorpholine-4-carbonyl]phenyl}-3-(dimethylamino)pyrrolidine-1-sulfonimidoyl fluoride, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
著者Lin, T.H, Zhu, Y, Wilson, I.A.
登録日2024-01-18
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Ultrapotent influenza hemagglutinin fusion inhibitors developed through SuFEx-enabled high-throughput medicinal chemistry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VQQ
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Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with small molecule 6S
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
著者Lin, T.H, Zhu, Y, Wilson, I.A.
登録日2024-01-19
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Ultrapotent influenza hemagglutinin fusion inhibitors developed through SuFEx-enabled high-throughput medicinal chemistry.
Proc.Natl.Acad.Sci.USA, 121, 2024

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件を2024-07-10に公開中

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