3DEM data search - EMN search

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Processing method	electron tomography subtomogram averaging single particle reconstruction helical reconstruction electron crystallography

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Entry	Title Data Release Date Last Update Submission Date Authors Processing Site EMPIAR-ID
Article	Journal Name PubMed ID Country
Sample	Component Species Aggregation State Molecular Weight (MDa)
Experiment	Cryogen Name Instrument for Vitrification Specimen Holder Specimen Temperature Microscope Accelerating Voltage Electron Source Detector
Processing	Method Resolution Resolution Method CTF correction 3D reconstruction Algorithm Software fo 3D reconstruction Model PDB ID Software for modeling

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File format	CSV format (Comma-Separated Values, for Excel, etc.) TSV format (Tab Separated Values, for Excel, etc.) JSON format

Showing all 34 items for (author: zeng & ms)

EMDB-61589:
Structure of HHV6B glycoprotein B

EMDB-63198:
Post-fusion ectodomain of KSHV gB in complex with 2C4 Fab

EMDB-38910:
Structure of KSHV glycoprotein B

EMDB-63209:
Local map of interface of KSHV gB and 2C4 fab

EMDB-60272:
Structure of Epstein-Barr virus major glycoprotein gp350 in complex with the receptor CR2

EMDB-37249:
Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1

EMDB-43542:
ELIC5 with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc in open conformation

EMDB-33990:
Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement)

EMDB-33992:
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 10E4 (localized refinement)

EMDB-33993:
Cryo-EM density map of EBV gHgL-gp42 in complex with four mAbs 5E3, 3E8, 6H2 and 10E4

EMDB-33994:
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)

EMDB-37203:
Cryo-EM structure of HSV-1 gB with D48 Fab complex

EMDB-41617:
CryoEM structure of PI3Kalpha

PDB-8tu6:
CryoEM structure of PI3Kalpha

EMDB-32356:
Computational design of a potent Epstein-Barr virus fusion protein gB nanoparticle vaccine

EMDB-27215:
ELIC apo in POPC nanodisc

EMDB-27216:
ELIC with cysteamine in POPC nanodisc

EMDB-27217:
ELIC apo in 2:1:1 POPC:POPE:POPG nanodisc

EMDB-27218:
ELIC with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc

EMDB-27219:
ELIC3 with cysteamine in 2:1:1 POPC:POPE:POPG nanodisc

EMDB-32088:
Computational design of a potent Epstein-Barr virus fusion protein gB nanoparticle vaccine

EMDB-33102:
Cryo-EM structure of EBV glycoprotein complex gHgL-gp42 bound by a neutralizing antibody 6H2

EMDB-30146:
Epstein-Barr Virus, C1 tegumented capsid reconstruction

EMDB-30152:
Epstein-Barr virus (EBV), C5 penton vertex

EMDB-30155:
Epstein-Barr virus, C12 portal dodecamer

EMDB-30156:
Epstein-Barr virus, C1 portal vertex reconstruction

EMDB-30157:
Epstein-Barr virus, C5 portal vertex

EMDB-30158:
Epstein-Barr virus, C1 portal-proximal penton vertex, CATC binding

EMDB-30159:
Epstein-Barr virus, C5 penton vertex, CATC absent

EMDB-30162:
Epstein-Barr virus, icosahedral tegumented capsid reconstruction

EMDB-7826:
Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri at 3.8 Angstrom resolution

EMDB-7828:
Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri bound to saposin

PDB-6d7w:
Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri at 3.8 Angstrom resolution

PDB-6d80:
Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri bound to saposin

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

Version 3 of the EMDB header file is now the official format.
The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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