[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,040 items for (author: xue & x)

EMDB-63803:
Plant chloroplast dicarboxylate transporter AtDiT1
Method: single particle / : Yang Z, Zhang P

EMDB-63804:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with OAA
Method: single particle / : Yang Z, Zhang P

EMDB-63805:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with 2-OG
Method: single particle / : Yang Z, Zhang P

EMDB-63806:
Plant chloroplast dicarboxylate transporter AtDiT2.1
Method: single particle / : Yang Z, Zhang P

EMDB-63807:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with malate
Method: single particle / : Yang Z, Zhang P

EMDB-63808:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with Glu
Method: single particle / : Yang Z, Zhang P

PDB-9mcr:
Plant chloroplast dicarboxylate transporter AtDiT1
Method: single particle / : Yang Z, Zhang P

PDB-9mcs:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with OAA
Method: single particle / : Yang Z, Zhang P

PDB-9mct:
Plant chloroplast dicarboxylate transporter AtDiT1 bound with 2-OG
Method: single particle / : Yang Z, Zhang P

PDB-9mcu:
Plant chloroplast dicarboxylate transporter AtDiT2.1
Method: single particle / : Yang Z, Zhang P

PDB-9mcv:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with malate
Method: single particle / : Yang Z, Zhang P

PDB-9u32:
Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with Glu
Method: single particle / : Yang Z, Zhang P

EMDB-64507:
Cryo-EM structure of the maize CER6-GL2 complex (inactive C222A mutant) in the presence of 28:0 CoA
Method: single particle / : Liu Y, Zhang P

EMDB-53123:
Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53148:
ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53152:
ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53171:
ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53172:
Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53180:
ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53181:
ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-53182:
ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qfx:
Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qgu:
ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qh1:
ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhj:
ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in LMNG
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhk:
Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhv:
ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhw:
ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

PDB-9qhx:
ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Method: single particle / : Garaeva AA, Fabianova V, Savkova K, Huszar S, Xue X, Lowary TL, Mikusova K, Seeger MA

EMDB-67991:
The structure of Nav1.7 with veratridine standing near the IFM motif (site I)
Method: single particle / : Fan X, Huang J, Yan N

EMDB-48285:
Human PARP1 N-terminal domains bound to nicked DNA
Method: single particle / : Sverzhinsky A, Pascal JM

PDB-9mi8:
Human PARP1 N-terminal domains bound to nicked DNA
Method: single particle / : Sverzhinsky A, Pascal JM

EMDB-71042:
Cryo-EM structure of chicken ROS1 in apo-state. Cryo-EM refinement is focused on the "head" region of chicken ROS1.
Method: single particle / : Bai XC, Zhang XW

EMDB-71047:
Cryo-EM structure of chicken ROS1 in apo-state. Cryo-EM refinement is focused on the "leg" region of chicken ROS1.
Method: single particle / : Bai XC, Zhang XW

EMDB-71049:
Cryo-EM structure of 1:1 chicken ROS1 and chicken NEL complex.
Method: single particle / : An WD, Zhang XW, Bai XC

EMDB-71051:
Cryo-EM structure of chicken NEL dimer bound with one human NICOL.
Method: single particle / : An WD, Zhang XW, Bai XC

EMDB-71057:
Cryo-EM structure of 1:2:1 ROS1/NEL/NICOL holo-complex, conformation 1.
Method: single particle / : An WD, Zhang XW, Bai XC

EMDB-71058:
Cryo-EM structure of 1:2:1 ROS1/NEL/NICOL holo-complex, conformation 2.
Method: single particle / : An WD, Zhang XW, Bai XC

EMDB-71059:
Cryo-EM structure of chicken ROS1 in apo-state. This is the complete map and model.
Method: single particle / : Bai XC, Zhang XW

PDB-9oyz:
Cryo-EM structure of chicken ROS1 in apo-state. Cryo-EM refinement is focused on the "head" region of chicken ROS1.
Method: single particle / : Bai XC, Zhang XW

PDB-9oz1:
Cryo-EM structure of chicken ROS1 in apo-state. Cryo-EM refinement is focused on the "leg" region of chicken ROS1.
Method: single particle / : Bai XC, Zhang XW

PDB-9oz6:
Cryo-EM structure of 1:1 chicken ROS1 and chicken NEL complex.
Method: single particle / : An WD, Zhang XW, Bai XC

PDB-9oz8:
Cryo-EM structure of chicken NEL dimer bound with one human NICOL.
Method: single particle / : An WD, Zhang XW, Bai XC

PDB-9ozc:
Cryo-EM structure of 1:2:1 ROS1/NEL/NICOL holo-complex, conformation 1.
Method: single particle / : An WD, Zhang XW, Bai XC

PDB-9ozh:
Cryo-EM structure of 1:2:1 ROS1/NEL/NICOL holo-complex, conformation 2.
Method: single particle / : An WD, Zhang XW, Bai XC

PDB-9ozi:
Cryo-EM structure of chicken ROS1 in apo-state. This is the complete map and model.
Method: single particle / : Bai XC, Zhang XW

EMDB-65575:
Cryo-EM structure of the Cytoplasmic lattice(CPL) from mouse oocyte
Method: single particle / : Liu SX, Xue JC, Zhang Y, Liu YS, Gao HS, Shen EZ

EMDB-65601:
Cryo-EM map of a 3-repeat filament from mouse oocyte Cytoplasmic Lattice (CPL)
Method: single particle / : Liu SX, Xue JC, Zhang Y, Liu YS, Gao HS, Shen EZ

PDB-9w2m:
Cryo-EM structure of the Cytoplasmic lattice(CPL) from mouse oocyte
Method: single particle / : Liu SX, Xue JC, Zhang Y, Liu YS, Gao HS, Shen EZ

EMDB-66412:
mouse PDCD5-TRiC-ADP complex
Method: single particle / : Song QQ, Cong Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more